Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003960 Camellia sinensis var. sinensis HOM05D020153 ORTHO05D024698 4.1e-159 564.7 285 100.0
CSS0024056 Camellia sinensis var. sinensis HOM05D020153 ORTHO05D110517 1.2e-78 297.4 294 64.3
CSS0001048 Camellia sinensis var. sinensis HOM05D020153 ORTHO05D024698 3.3e-28 129.8 80 80.0
CSS0030508 Camellia sinensis var. sinensis HOM05D020153 ORTHO05D024698 2.2e-19 100.5 78 65.4
CSS0044783 Camellia sinensis var. sinensis HOM05D020153 ORTHO05D024698 2.2e-19 100.5 78 65.4
Actinidia22891 Actinidia chinensis HOM05D001842 ORTHO05D001849 8.8e-13 78.6 67 64.2
Manes.01G155900 Manihot esculenta HOM05D001842 ORTHO05D001849 2.6e-12 77.0 41 85.4
vmacro20625 Vaccinium macrocarpon HOM05D001842 ORTHO05D001849 4.4e-12 76.3 41 82.9
Sc05g0006840 Simmondsia chinensis HOM05D001842 ORTHO05D001849 7.5e-12 75.5 60 58.3
CSS0024804 Camellia sinensis var. sinensis HOM05D001842 ORTHO05D001849 9.7e-12 75.1 41 82.9
CSS0030981 Camellia sinensis var. sinensis HOM05D001842 ORTHO05D001849 9.7e-12 75.1 41 82.9
MBI05_g33293_MAGBIO Magnolia biondii HOM05D001842 ORTHO05D001849 9.7e-12 75.1 41 82.9
QL11p056280 Quercus lobata HOM05D001842 ORTHO05D001849 9.7e-12 75.1 41 82.9
Atru.chr3.124 Acer truncatum HOM05D001842 ORTHO05D001849 1.3e-11 74.7 41 80.5
Cpa.g.sc6.364 Carica papaya HOM05D001842 ORTHO05D001849 1.7e-11 74.3 41 82.9
Nitab4.5_0001467g0060 Nicotiana tabacum HOM05D001842 ORTHO05D001849 1.7e-11 74.3 41 82.9
Nitab4.5_0007782g0070 Nicotiana tabacum HOM05D001842 ORTHO05D001849 1.7e-11 74.3 41 82.9
Sed0008264 Sechium edule HOM05D001842 ORTHO05D001849 1.7e-11 74.3 94 44.7
TWI09G0475 Tripterygium wilfordii HOM05D001842 ORTHO05D001849 1.7e-11 74.3 41 82.9
Aqoxy6G01606 Aquilegia oxysepala HOM05D001842 ORTHO05D001849 2.2e-11 73.9 41 80.5
CiPaw.05G092800 Carya illinoinensis HOM05D001842 ORTHO05D001849 2.2e-11 73.9 41 80.5
Haze_02003 Corylus avellana HOM05D001842 ORTHO05D001849 2.2e-11 73.9 41 80.5
PSO541G1162 Papaver somniferum HOM05D001842 ORTHO05D001849 2.2e-11 73.9 41 80.5
TAR376G0454 Trochodendron aralioides HOM05D001842 ORTHO05D001849 2.2e-11 73.9 54 66.7
CiPaw.06G115800 Carya illinoinensis HOM05D001842 ORTHO05D001849 2.8e-11 73.6 41 78.0
MELO3C013251.2 Cucumis melo HOM05D001842 ORTHO05D001849 2.8e-11 73.6 71 54.9
ECA238G3849 Erigeron canadensis HOM05D001842 ORTHO05D001849 2.8e-11 73.6 41 82.9
Gohir.A07G171600 Gossypium hirsutum HOM05D001842 ORTHO05D001849 2.8e-11 73.6 41 80.5
Gohir.D07G178300 Gossypium hirsutum HOM05D001842 ORTHO05D001849 2.8e-11 73.6 41 80.5
Gorai.001G199400 Gossypium raimondii HOM05D001842 ORTHO05D001849 2.8e-11 73.6 41 80.5
MD05G1135500 Malus domestica HOM05D001842 ORTHO05D001849 2.8e-11 73.6 41 82.9
PSO675G7298 Papaver somniferum HOM05D001842 ORTHO05D001849 2.8e-11 73.6 41 78.0
ClCG02G003430 Citrullus lanatus HOM05D001842 ORTHO05D001849 3.7e-11 73.2 58 62.1
CsaV3_7G001880 Cucumis sativus L. HOM05D001842 ORTHO05D001849 3.7e-11 73.2 71 53.5
HanXRQChr14g0442891 Helianthus annuus HOM05D001842 ORTHO05D001849 3.7e-11 73.2 60 61.7
Lsat_1_v5_gn_8_112480 Lactuca sativa HOM05D001842 ORTHO05D001849 3.7e-11 73.2 41 80.5
Nn6g31683 Nelumbo nucifera HOM05D001842 ORTHO05D001849 3.7e-11 73.2 67 58.2
Prupe.8G179600 Prunus persica HOM05D001842 ORTHO05D001849 3.7e-11 73.2 41 82.9
arahy.Tifrunner.gnm1.ann1.1FV09I Arachis hypogaea HOM05D001842 ORTHO05D001849 4.8e-11 72.8 43 74.4
arahy.Tifrunner.gnm1.ann1.649J27 Arachis hypogaea HOM05D001842 ORTHO05D001849 4.8e-11 72.8 43 74.4
Rhsim10G0194400 Rhododendron simsii HOM05D001842 ORTHO05D001849 4.8e-11 72.8 41 78.0
AT1G21630 Arabidopsis thaliana HOM05D001842 ORTHO05D001849 6.3e-11 72.4 41 78.0
AUR62010172 Chenopodium quinoa HOM05D001842 ORTHO05D001849 6.3e-11 72.4 57 57.9
Dinv28318 Davidia involucrata HOM05D001842 ORTHO05D001849 8.3e-11 72.0 41 78.0
Glyma.02G311333 Glycine max HOM05D001842 ORTHO05D001849 8.3e-11 72.0 67 56.7
Duzib264G1083 Durio zibethinus HOM05D001842 ORTHO05D001849 1.1e-10 71.6 41 80.5
Lj2C501G4 Lonicera japonica HOM05D001842 ORTHO05D001849 1.1e-10 71.6 45 73.3
PGR042G2901 Punica granatum HOM05D001842 ORTHO05D001849 1.1e-10 71.6 74 52.7
THA.LOC104812085 Tarenaya hassleriana HOM05D001842 ORTHO05D001849 1.1e-10 71.6 41 80.5
Aa31LG7G5600 Aethionema arabicum HOM05D001842 ORTHO05D001849 1.4e-10 71.2 41 78.0
BcaB07g32156 Brassica carinata HOM05D001842 ORTHO05D001849 1.4e-10 71.2 41 78.0
A06p17700 Brassica napus HOM05D001842 ORTHO05D001849 1.4e-10 71.2 41 78.0
BraA06t24862Z Brassica rapa HOM05D001842 ORTHO05D001849 1.4e-10 71.2 41 78.0
Nn5g30998 Nelumbo nucifera HOM05D001842 ORTHO05D001849 1.4e-10 71.2 53 67.9
AL1G34770 Arabidopsis lyrata HOM05D001842 ORTHO05D001849 1.8e-10 70.9 41 75.6
arahy.Tifrunner.gnm1.ann1.84FHQN Arachis hypogaea HOM05D001842 ORTHO05D001849 1.8e-10 70.9 41 75.6
arahy.Tifrunner.gnm1.ann1.RT0S28 Arachis hypogaea HOM05D001842 ORTHO05D001849 1.8e-10 70.9 41 75.6
BcaB03g14261 Brassica carinata HOM05D001842 ORTHO05D001849 1.8e-10 70.9 41 78.0
CAN.G1238.17 Capsicum annuum HOM05D001842 ORTHO05D001849 1.8e-10 70.9 41 80.5
AUR62013173 Chenopodium quinoa HOM05D001842 ORTHO05D001849 1.8e-10 70.9 65 52.3
FAN27G0714 Fragaria x ananassa HOM05D001842 ORTHO05D001849 1.8e-10 70.9 41 80.5
MD10G1140800 Malus domestica HOM05D001842 ORTHO05D001849 1.8e-10 70.9 41 80.5
Phvul.008G292100 Phaseolus vulgaris HOM05D001842 ORTHO05D001849 1.8e-10 70.9 67 56.7
Solyc02g082540.4 Solanum lycopersicum HOM05D001842 ORTHO05D001849 1.8e-10 70.9 41 80.5
Sopen02g027220 Solanum pennellii HOM05D001842 ORTHO05D001849 1.8e-10 70.9 41 80.5
TWI53G0649 Tripterygium wilfordii HOM05D001842 ORTHO05D001849 1.8e-10 70.9 41 75.6
BcaC06g34897 Brassica carinata HOM05D001842 ORTHO05D001849 2.4e-10 70.5 41 75.6
C07p22040 Brassica napus HOM05D001842 ORTHO05D001849 2.4e-10 70.5 41 75.6
BolC7t42734H Brassica oleracea HOM05D001842 ORTHO05D001849 2.4e-10 70.5 41 75.6
BolC8t49733H Brassica oleracea HOM05D001842 ORTHO05D001849 2.4e-10 70.5 41 75.6
Cc07_g11940 Coffea canephora HOM05D001842 ORTHO05D001849 2.4e-10 70.5 41 78.0
HanXRQChr09g0259431 Helianthus annuus HOM05D001842 ORTHO05D001849 2.4e-10 70.5 44 77.3
CARHR021980 Cardamine hirsuta HOM05D001842 ORTHO05D001849 3.1e-10 70.1 41 75.6
Ciclev10024733m.g Citrus clementina HOM05D001842 ORTHO05D001849 3.1e-10 70.1 41 78.0
Lsat_1_v5_gn_2_73740 Lactuca sativa HOM05D001842 ORTHO05D001849 3.1e-10 70.1 48 72.9
A07p14990 Brassica napus HOM05D001842 ORTHO05D001849 4.1e-10 69.7 41 75.6
BraA07t29245Z Brassica rapa HOM05D001842 ORTHO05D001849 4.1e-10 69.7 41 75.6
Sed0023090 Sechium edule HOM05D001842 ORTHO05D001849 4.1e-10 69.7 75 54.7
Thecc.01G004600 Theobroma cacao HOM05D001842 ORTHO05D001849 4.1e-10 69.7 41 80.5
VMungo0647G1618 Vigna mungo HOM05D001842 ORTHO05D001849 4.1e-10 69.7 41 75.6
BcaC05g26080 Brassica carinata HOM05D001842 ORTHO05D001849 5.3e-10 69.3 41 75.6
FvH4_2g16750 Fragaria vesca HOM05D001842 ORTHO05D001849 5.3e-10 69.3 41 78.0
FAN24G0597 Fragaria x ananassa HOM05D001842 ORTHO05D001849 5.3e-10 69.3 41 78.0
Glyma.14G001200 Glycine max HOM05D001842 ORTHO05D001849 5.3e-10 69.3 41 73.2
Potri.005G102200 Populus trichocarpa HOM05D001842 ORTHO05D001849 5.3e-10 69.3 41 80.5
TAR628G0545 Trochodendron aralioides HOM05D001842 ORTHO05D001849 5.3e-10 69.3 53 67.9
C08p20960 Brassica napus HOM05D001842 ORTHO05D001849 7.0e-10 68.9 41 73.2
Dinv40195 Davidia involucrata HOM05D001842 ORTHO05D001849 7.0e-10 68.9 41 78.0
Hma1.2p1_0085F.1_g044600 Hydrangea macrophylla HOM05D001842 ORTHO05D001849 7.0e-10 68.9 41 78.0
Lalb_Chr04g0246921 Lupinus albus HOM05D001842 ORTHO05D001849 7.0e-10 68.9 41 73.2
Sabra05G0084600 Salix brachista HOM05D001842 ORTHO05D001849 7.0e-10 68.9 41 80.5
Solyc02g038812.1 Solanum lycopersicum HOM05D001842 ORTHO05D001849 7.0e-10 68.9 41 75.6
Sopen02g012560 Solanum pennellii HOM05D001842 ORTHO05D001849 7.0e-10 68.9 41 75.6
THA.LOC104813678 Tarenaya hassleriana HOM05D001842 ORTHO05D001849 7.0e-10 68.9 41 78.0
Cfa005365 Carpinus fangiana HOM05D001842 ORTHO05D001849 9.1e-10 68.6 47 63.8
Nitab4.5_0000467g0080 Nicotiana tabacum HOM05D001842 ORTHO05D001849 9.1e-10 68.6 40 77.5
LjContig00081g0008818 Lotus japonicus HOM05D001842 ORTHO05D001849 1.2e-09 68.2 41 73.2
Hund06365 Selenicereus undatus HOM05D001842 ORTHO05D001849 1.2e-09 68.2 52 65.4
GSVIVG01023872001 Vitis vinifera HOM05D001842 ORTHO05D001849 1.2e-09 68.2 41 75.6
C05p20600 Brassica napus HOM05D001842 ORTHO05D001849 1.6e-09 67.8 41 75.6
BolC5t30758H Brassica oleracea HOM05D001842 ORTHO05D001849 1.6e-09 67.8 41 75.6
CSS0039865 Camellia sinensis var. sinensis HOM05D001842 ORTHO05D024698 1.6e-09 67.8 64 56.2
Ca_06502_v3 Cicer arietinum L. HOM05D001842 ORTHO05D001849 1.6e-09 67.8 41 73.2
Nitab4.5_0001365g0070 Nicotiana tabacum HOM05D001842 ORTHO05D001849 1.6e-09 67.8 40 77.5
Carub.0001s2105 Capsella rubella HOM05D001842 ORTHO05D001849 2.0e-09 67.4 41 73.2
CAN.G328.10 Capsicum annuum HOM05D001842 ORTHO05D001849 2.0e-09 67.4 41 73.2
COL.COLO4_22557 Corchorus olitorius HOM05D001842 ORTHO05D001849 2.0e-09 67.4 41 75.6
DCAR_016693 Daucus carota HOM05D001842 ORTHO05D001849 2.0e-09 67.4 40 75.0
Duzib147G0584 Durio zibethinus HOM05D001842 ORTHO05D001849 2.0e-09 67.4 41 73.2
MBI08_g37961_MAGBIO Magnolia biondii HOM05D001842 ORTHO05D001849 2.0e-09 67.4 41 73.2
Oeu039712.1 Olea europaea HOM05D001842 ORTHO05D001849 2.0e-09 67.4 41 73.2
Peaxi162Scf00580g00016 Petunia axillaris HOM05D001842 ORTHO05D001849 2.0e-09 67.4 41 73.2
TPR.G18637 Trifolium pratense HOM05D001842 ORTHO05D001849 2.0e-09 67.4 41 73.2
Thhalv10006584m.g Eutrema salsugineum HOM05D001842 ORTHO05D001849 2.7e-09 67.0 41 75.6
Sp1g19150 Schrenkiella parvula HOM05D001842 ORTHO05D001849 2.7e-09 67.0 71 46.5
Sed0009695 Sechium edule HOM05D001842 ORTHO05D001849 2.7e-09 67.0 41 75.6
SalBow5G1010 Salvia bowleyana HOM05D001842 ORTHO05D001849 3.5e-09 66.6 41 73.2
Oeu012542.1 Olea europaea HOM05D001842 ORTHO05D001849 4.5e-09 66.2 54 59.3
Psat2g000840 Pisum sativum HOM05D001842 ORTHO05D001849 4.5e-09 66.2 41 73.2
Potri.007G063200 Populus trichocarpa HOM05D001842 ORTHO05D001849 4.5e-09 66.2 40 77.5
Eucgr.G01875 Eucalyptus grandis HOM05D001842 ORTHO05D001849 5.9e-09 65.9 41 73.2
MD05G1138200 Malus domestica HOM05D001842 ORTHO05D001849 5.9e-09 65.9 43 74.4
MSTRG.3637 Avicennia marina HOM05D001842 ORTHO05D001849 1.0e-08 65.1 41 73.2
Medtr5g099170 Medicago truncatula HOM05D001842 ORTHO05D001849 1.0e-08 65.1 41 70.7
SGA_v2.0_scaffold229G43301 Striga asiatica HOM05D001842 ORTHO05D001849 1.0e-08 65.1 41 73.2
BraA08t34820Z Brassica rapa HOM05D001842 ORTHO05D001849 1.3e-08 64.7 41 73.2
A08p28890 Brassica napus HOM05D001842 ORTHO05D001849 2.9e-08 63.5 41 73.2
Actinidia17353 Actinidia chinensis HOM05D001842 ORTHO05D001849 5.0e-08 62.8 60 58.3
RcHm_v2.0_Chr6g0280871 Rosa chinensis HOM05D001842 ORTHO05D001849 5.0e-08 62.8 41 75.6
SGA_v2.0_scaffold45G17080 Striga asiatica HOM05D001842 ORTHO05D001849 5.0e-08 62.8 67 49.3
unitig_88.g27776 Utricularia gibba HOM05D001842 ORTHO05D001849 5.0e-08 62.8 41 68.3
COL.COLO4_07475 Corchorus olitorius HOM05D001842 ORTHO05D001849 8.5e-08 62.0 40 70.0
Ah.01g017570 Amaranthus hybridus HOM05D001842 ORTHO05D001849 1.5e-07 61.2 73 45.2
MSTRG.15602 Avicennia marina HOM05D001842 ORTHO05D001849 1.5e-07 61.2 40 72.5
Migut.H02211 Erythranthe guttata HOM05D001842 ORTHO05D001849 2.5e-07 60.5 41 65.9
Manes.18G003700 Manihot esculenta HOM05D001842 ORTHO05D001849 2.5e-07 60.5 38 71.1
Manes.05G124400 Manihot esculenta HOM05D001842 ORTHO05D001849 3.2e-07 60.1 36 72.2
Cfa014111 Carpinus fangiana HOM05D001842 ORTHO05D001849 4.2e-07 59.7 36 75.0
CiPaw.08G075300 Carya illinoinensis HOM05D001842 ORTHO05D001849 4.2e-07 59.7 36 75.0
Aa31LG4G7350 Aethionema arabicum HOM05D001245 ORTHO05D004475 7.2e-07 58.9 40 70.0
ECA234G4380 Erigeron canadensis HOM05D001418 ORTHO05D002038 7.2e-07 58.9 37 67.6
CDE02G2542 Ceratophyllum demersum HOM05D001842 ORTHO05D001849 9.4e-07 58.5 39 66.7
CiPaw.07G136200 Carya illinoinensis HOM05D001842 ORTHO05D001849 1.2e-06 58.2 35 74.3
Potri.002G008600 Populus trichocarpa HOM05D001842 ORTHO05D001849 1.2e-06 58.2 35 74.3
Eucgr.F01786 Eucalyptus grandis HOM05D001842 ORTHO05D001849 1.6e-06 57.8 39 71.8
QL02p015109 Quercus lobata HOM05D001842 ORTHO05D001849 1.6e-06 57.8 39 66.7
Sabra02G0006400 Salix brachista HOM05D001842 ORTHO05D001849 1.6e-06 57.8 34 76.5
TWI56G1388 Tripterygium wilfordii HOM05D001842 ORTHO05D001849 1.6e-06 57.8 37 70.3
CDE04G3412 Ceratophyllum demersum HOM05D001842 ORTHO05D001849 2.1e-06 57.4 42 59.5
COL.COLO4_07214 Corchorus olitorius HOM05D001842 ORTHO05D001849 2.1e-06 57.4 36 72.2
Duzib093G1115 Durio zibethinus HOM05D001842 ORTHO05D001849 2.7e-06 57.0 36 72.2
Thecc.08G062300 Theobroma cacao HOM05D001842 ORTHO05D001849 3.6e-06 56.6 36 72.2
CSS0035202 Camellia sinensis var. sinensis HOM05D001842 ORTHO05D001849 4.7e-06 56.2 34 70.6
CSS0043241 Camellia sinensis var. sinensis HOM05D020153 ORTHO05D001849 4.7e-06 56.2 23 95.7
Haze_22829 Corylus avellana HOM05D001842 ORTHO05D001849 6.1e-06 55.8 36 69.4
Medtr1g018480 Medicago truncatula HOM05D001842 ORTHO05D001849 8.0e-06 55.5 40 65.0
Potri.005G253000 Populus trichocarpa HOM05D001842 ORTHO05D001849 8.0e-06 55.5 35 71.4
Sc02g0009180 Simmondsia chinensis HOM05D001842 ORTHO05D001849 8.0e-06 55.5 43 60.5


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