Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003938 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 7.1e-212 740.3 374 100.0
CSS0014629 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 3.1e-143 512.3 420 70.5
CSS0006325 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 1.6e-142 510.0 420 70.2
CSS0046042 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 1.4e-138 496.9 417 69.3
Actinidia09998 Actinidia chinensis HOM05D004612 ORTHO05D004940 1.9e-124 449.9 420 62.9
Rhsim07G0018100 Rhododendron simsii HOM05D004612 ORTHO05D004940 8.9e-122 441.0 418 62.0
GSVIVG01026844001 Vitis vinifera HOM05D004612 ORTHO05D004940 6.0e-118 428.3 413 61.0
Hma1.2p1_0033F.1_g020400 Hydrangea macrophylla HOM05D004612 ORTHO05D004940 1.5e-116 423.7 417 60.9
Haze_15464 Corylus avellana HOM05D004612 ORTHO05D004940 2.5e-116 422.9 402 60.0
Cfa003958 Carpinus fangiana HOM05D004612 ORTHO05D004940 7.3e-116 421.4 402 60.0
QL08p049561 Quercus lobata HOM05D004612 ORTHO05D004940 8.0e-115 417.9 414 59.2
Dinv32447 Davidia involucrata HOM05D004612 ORTHO05D004940 1.4e-114 417.2 405 61.0
TAR629G0951 Trochodendron aralioides HOM05D004612 ORTHO05D004940 3.4e-113 412.5 419 59.2
Ciclev10024326m.g Citrus clementina HOM05D004612 ORTHO05D004940 9.8e-113 411.0 411 58.4
vmacro13313 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 4.1e-111 405.6 396 61.4
CsaV3_3G009110 Cucumis sativus L. HOM05D004612 ORTHO05D004940 1.7e-109 400.2 415 57.3
PGR031G1383 Punica granatum HOM05D004612 ORTHO05D004940 5.1e-109 398.7 393 61.1
Gohir.A11G082600 Gossypium hirsutum HOM05D004612 ORTHO05D004940 1.5e-108 397.1 402 59.5
MD07G1141600 Malus domestica HOM05D004612 ORTHO05D004940 4.3e-108 395.6 412 58.3
Manes.12G065000 Manihot esculenta HOM05D004612 ORTHO05D004940 5.6e-108 395.2 414 56.5
CSS0040114 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 1.6e-107 393.7 399 61.7
MELO3C006131.2 Cucumis melo HOM05D004612 ORTHO05D004940 1.6e-107 393.7 409 57.7
Potri.014G080600 Populus trichocarpa HOM05D004612 ORTHO05D004940 3.6e-107 392.5 412 56.1
Thecc.01G363500 Theobroma cacao HOM05D004612 ORTHO05D004940 4.7e-107 392.1 412 57.0
Nn3g17842 Nelumbo nucifera HOM05D004612 ORTHO05D004940 8.1e-107 391.3 415 56.9
Duzib133G0359 Durio zibethinus HOM05D004612 ORTHO05D004940 1.4e-106 390.6 413 57.1
FAN06G3441 Fragaria x ananassa HOM05D004612 ORTHO05D004940 1.8e-106 390.2 406 57.6
FvH4_7g13631 Fragaria vesca HOM05D004612 ORTHO05D004940 4.0e-106 389.0 406 57.6
Glyma.03G096900 Glycine max HOM05D004612 ORTHO05D004940 5.2e-106 388.7 387 58.1
FAN10G2510 Fragaria x ananassa HOM05D004612 ORTHO05D004940 6.8e-106 388.3 403 58.6
Gorai.007G097300 Gossypium raimondii HOM05D004612 ORTHO05D004940 6.8e-106 388.3 416 57.0
FAN06G2470 Fragaria x ananassa HOM05D004612 ORTHO05D004940 1.2e-105 387.5 406 57.4
ClCG05G001720 Citrullus lanatus HOM05D004612 ORTHO05D004940 4.4e-105 385.6 436 54.6
Eucgr.D02267 Eucalyptus grandis HOM05D004612 ORTHO05D004940 3.7e-104 382.5 384 58.9
CiPaw.02G028400 Carya illinoinensis HOM05D004612 ORTHO05D004940 8.3e-104 381.3 394 57.4
Nitab4.5_0010827g0010 Nicotiana tabacum HOM05D004612 ORTHO05D004940 1.1e-103 380.9 403 55.3
TWI59G0622 Tripterygium wilfordii HOM05D004612 ORTHO05D004940 1.1e-103 380.9 410 56.1
Cpa.g.sc20.34 Carica papaya HOM05D004612 ORTHO05D004940 1.4e-103 380.6 411 55.0
Sopen05g028090 Solanum pennellii HOM05D004612 ORTHO05D004940 3.2e-103 379.4 418 53.8
Solyc05g048770.3 Solanum lycopersicum HOM05D004612 ORTHO05D004940 1.2e-102 377.5 418 53.1
FAN03G2220 Fragaria x ananassa HOM05D004612 ORTHO05D004940 7.8e-102 374.8 443 52.8
Sed0015875 Sechium edule HOM05D004612 ORTHO05D004940 7.8e-102 374.8 406 56.4
CAN.G718.1 Capsicum annuum HOM05D004612 ORTHO05D004940 1.1e-100 370.9 420 52.4
Lj3g0020312 Lotus japonicus HOM05D004612 ORTHO05D004940 1.5e-100 370.5 396 56.6
Thhalv10028700m.g Eutrema salsugineum HOM05D004612 ORTHO05D004940 1.9e-100 370.2 408 53.2
Lalb_Chr10g0097231 Lupinus albus HOM05D004612 ORTHO05D004940 3.3e-100 369.4 387 58.1
MSTRG.17249 Avicennia marina HOM05D004612 ORTHO05D004940 4.3e-100 369.0 388 56.2
TPR.G4369 Trifolium pratense HOM05D004612 ORTHO05D004940 5.6e-100 368.6 391 56.0
Cc02_g37600 Coffea canephora HOM05D004612 ORTHO05D004940 1.6e-99 367.1 415 52.8
Lj9C580G6 Lonicera japonica HOM05D004612 ORTHO05D004940 4.7e-99 365.5 399 56.6
Nitab4.5_0002608g0040 Nicotiana tabacum HOM05D004612 ORTHO05D004940 6.2e-99 365.2 416 52.6
Psat4g153800 Pisum sativum HOM05D004612 ORTHO05D004940 6.2e-99 365.2 389 56.6
Medtr8g031580 Medicago truncatula HOM05D004612 ORTHO05D004940 1.1e-98 364.4 387 57.6
arahy.Tifrunner.gnm1.ann1.4I97V1 Arachis hypogaea HOM05D004612 ORTHO05D004940 1.4e-98 364.0 400 53.5
Ca_27541_v3 Cicer arietinum L. HOM05D004612 ORTHO05D004940 2.0e-97 360.1 386 57.3
SalBow3G1907 Salvia bowleyana HOM05D004612 ORTHO05D004940 7.6e-97 358.2 421 53.4
AL6G52840 Arabidopsis lyrata HOM05D004612 ORTHO05D004940 1.7e-96 357.1 403 52.4
THA.LOC104801450 Tarenaya hassleriana HOM05D004612 ORTHO05D004940 4.9e-96 355.5 380 55.0
C09p00500 Brassica napus HOM05D004612 ORTHO05D004940 5.4e-95 352.1 408 51.5
BraA09t35721Z Brassica rapa HOM05D004612 ORTHO05D004940 1.2e-94 350.9 405 51.9
Carub.0006s3663 Capsella rubella HOM05D004612 ORTHO05D004940 1.2e-94 350.9 403 51.1
PSO782G5368 Papaver somniferum HOM05D004612 ORTHO05D004940 2.1e-94 350.1 417 52.8
Aa31LG5G400 Aethionema arabicum HOM05D004612 ORTHO05D004940 7.8e-94 348.2 416 49.3
BcaB01g02261 Brassica carinata HOM05D004612 ORTHO05D004940 1.0e-93 347.8 404 52.5
DCAR_008600 Daucus carota HOM05D004612 ORTHO05D004940 3.0e-93 346.3 409 52.6
HanXRQChr16g0523031 Helianthus annuus HOM05D004612 ORTHO05D004940 3.0e-93 346.3 392 53.8
BolC9t52984H Brassica oleracea HOM05D004612 ORTHO05D004940 6.6e-93 345.1 421 49.4
COL.COLO4_12673 Corchorus olitorius HOM05D004612 ORTHO05D004940 1.5e-92 344.0 385 54.5
PSO063G2700 Papaver somniferum HOM05D004612 ORTHO05D004940 1.5e-92 344.0 418 52.4
BcaB01g02263 Brassica carinata HOM05D004612 ORTHO05D004940 4.3e-92 342.4 404 51.5
AUR62033332 Chenopodium quinoa HOM05D004612 ORTHO05D004940 7.3e-92 341.7 432 50.5
A09p00400 Brassica napus HOM05D004612 ORTHO05D004940 9.6e-92 341.3 405 51.1
ECA234G1569 Erigeron canadensis HOM05D004612 ORTHO05D004940 9.6e-92 341.3 412 51.2
Sc07g0008070 Simmondsia chinensis HOM05D004612 ORTHO05D004940 9.6e-92 341.3 410 50.2
AT4G00590 Arabidopsis thaliana HOM05D004612 ORTHO05D004940 1.6e-91 340.5 394 51.3
Migut.B01722 Erythranthe guttata HOM05D004612 ORTHO05D004940 2.8e-91 339.7 393 52.2
Peaxi162Scf00397g00041 Petunia axillaris HOM05D004612 ORTHO05D004940 8.1e-91 338.2 385 53.0
AUR62004317 Chenopodium quinoa HOM05D004612 ORTHO05D004940 2.4e-90 336.7 415 50.4
EL10Ac1g00526 Beta vulgaris HOM05D004612 ORTHO05D004940 3.1e-90 336.3 406 51.0
BcaC04g24158 Brassica carinata HOM05D004612 ORTHO05D004940 1.2e-89 334.3 408 50.2
Atru.chr5.445 Acer truncatum HOM05D004612 ORTHO05D004940 5.8e-89 332.0 315 60.0
Lsat_1_v5_gn_4_36480 Lactuca sativa HOM05D004612 ORTHO05D004940 5.8e-89 332.0 390 54.1
CSS0037024 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 9.9e-89 331.3 351 59.8
RcHm_v2.0_Chr1g0353691 Rosa chinensis HOM05D004612 ORTHO05D004940 2.2e-88 330.1 358 56.4
Os04g0682500 Oryza sativa ssp. japonica HOM05D004612 ORTHO05D004940 1.4e-87 327.4 410 49.0
FAN01G1921 Fragaria x ananassa HOM05D000092 ORTHO05D004940 4.6e-86 322.4 419 49.2
SGA_v2.0_scaffold95G28856 Striga asiatica HOM05D004612 ORTHO05D004940 1.1e-82 311.2 398 49.2
AUR62023440 Chenopodium quinoa HOM05D004612 ORTHO05D004940 6.9e-82 308.5 399 49.1
AUR62033327 Chenopodium quinoa HOM05D004612 ORTHO05D004940 6.9e-82 308.5 399 49.1
MD01G1053600 Malus domestica HOM05D004612 ORTHO05D004940 2.6e-81 306.6 341 54.5
Sabra14G0058500 Salix brachista HOM05D004612 ORTHO05D004940 7.6e-81 305.1 428 47.0
Phvul.011G160800 Phaseolus vulgaris HOM05D004612 ORTHO05D004940 2.1e-78 297.0 298 55.7
Prupe.2G162500 Prunus persica HOM05D004612 ORTHO05D004940 2.1e-78 297.0 299 59.5
Ah.05g176430 Amaranthus hybridus HOM05D004612 ORTHO05D004940 1.3e-75 287.7 427 45.7
unitig_0.g1278 Utricularia gibba HOM05D004612 ORTHO05D004940 1.4e-74 284.3 417 45.8
ATR0680G383 Amborella trichopoda HOM05D004612 ORTHO05D004940 9.9e-73 278.1 387 47.0
HPP92_021103 Vanilla planifolia HOM05D004612 ORTHO05D004940 1.9e-71 273.9 400 44.8
Oeu014678.1 Olea europaea HOM05D004612 ORTHO05D004940 7.4e-68 261.9 422 44.5
BcaNung05358 Brassica carinata HOM05D004612 ORTHO05D004940 1.6e-67 260.8 325 50.5
Gohir.D11G091300 Gossypium hirsutum HOM05D004612 ORTHO05D004940 9.0e-66 255.0 285 54.7
MBI17_g08173_MAGBIO Magnolia biondii HOM05D004612 ORTHO05D004940 9.0e-66 255.0 336 47.9
Aqoxy46s002 Aquilegia oxysepala HOM05D004612 ORTHO05D004940 1.3e-61 241.1 318 48.4
Hund16942 Selenicereus undatus HOM05D004612 ORTHO05D004940 3.9e-61 239.6 403 41.2
Pp3c10_3850 Physcomitrium patens HOM05D004612 ORTHO05D004940 1.5e-60 237.7 363 43.8
BcaNung07163 Brassica carinata HOM05D004612 ORTHO05D004940 8.2e-59 231.9 331 44.7
CARHR248760 Cardamine hirsuta HOM05D004612 ORTHO05D004940 3.2e-55 219.9 302 45.4
CDE05G3327 Ceratophyllum demersum HOM05D004612 ORTHO05D004940 5.7e-52 209.1 402 39.3
Zm00001eb433970 Zea mays HOM05D004612 ORTHO05D004940 6.3e-51 205.7 294 43.9
TWI59G1187 Tripterygium wilfordii HOM05D004612 ORTHO05D004940 9.1e-50 201.8 261 49.0
Nitab4.5_0010110g0020 Nicotiana tabacum HOM05D004612 ORTHO05D004940 3.4e-49 199.9 254 50.8
Sp6g00630 Schrenkiella parvula HOM05D004612 ORTHO05D004940 4.5e-49 199.5 270 45.6
CARHR288840 Cardamine hirsuta HOM05D004612 ORTHO05D004940 1.1e-47 194.9 254 48.0
SMO364G0809 Selaginella moellendorffii HOM05D004612 ORTHO05D004940 2.5e-47 193.7 375 39.7
VMungo1127G0482 Vigna mungo HOM05D004612 ORTHO05D004940 5.5e-47 192.6 189 58.2
VMungo1127G0842 Vigna mungo HOM05D004612 ORTHO05D004940 2.8e-43 180.3 210 51.0
PGSC0003DMG400021637 Solanum tuberosum HOM05D004612 ORTHO05D004940 4.1e-42 176.4 188 51.1
Prupe.8G034000 Prunus persica HOM05D004612 ORTHO05D004940 9.1e-42 175.3 173 60.7
AagrBONN_evm.TU.Sc2ySwM_344.1798 Anthoceros agrestis HOM05D004612 ORTHO05D004940 2.0e-41 174.1 375 37.1
Peaxi162Scf00246g01122 Petunia axillaris HOM05D004612 ORTHO05D004940 4.2e-39 166.4 177 55.4
CSS0007536 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 8.0e-38 162.2 167 59.9
Mapoly0068s0044 Marchantia polymorpha HOM05D004612 ORTHO05D004940 8.8e-37 158.7 314 38.2
vmacro13422 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 9.7e-36 155.2 271 40.6
Haze_05813 Corylus avellana HOM05D000402 ORTHO05D004940 4.8e-35 152.9 140 60.0
Gohir.D02G148550 Gossypium hirsutum HOM05D004612 ORTHO05D004940 4.7e-30 136.3 191 50.3
Gorai.005G166700 Gossypium raimondii HOM05D004612 ORTHO05D004940 1.0e-29 135.2 176 50.6
vmacro22088 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 1.8e-29 134.4 190 47.9
Oeu004526.1 Olea europaea HOM05D004612 ORTHO05D004940 2.8e-27 127.1 139 56.8
Gorai.005G189400 Gossypium raimondii HOM05D004612 ORTHO05D004940 3.7e-27 126.7 176 48.9
vmacro13310 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 3.1e-26 123.6 131 55.7
SEGI_36589 Sequoiadendron giganteum HOM05D004612 ORTHO05D004940 2.0e-25 120.9 118 57.6
Gohir.D02G101800 Gossypium hirsutum HOM05D004612 ORTHO05D004940 1.9e-23 114.4 88 71.6
Gohir.D11G259000 Gossypium hirsutum HOM05D004612 ORTHO05D004940 1.9e-23 114.4 88 70.5
Gorai.005G115400 Gossypium raimondii HOM05D004612 ORTHO05D004940 1.0e-21 108.6 88 69.3
Gorai.007G277100 Gossypium raimondii HOM05D004612 ORTHO05D004940 1.4e-21 108.2 88 68.2
vmacro00164 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 1.4e-21 108.2 242 36.8
arahy.Tifrunner.gnm1.ann1.B6YWYF Arachis hypogaea HOM05D004612 ORTHO05D004940 7.5e-20 102.4 96 56.2
Aqoxy5G04026 Aquilegia oxysepala HOM05D004612 ORTHO05D004940 2.7e-17 94.0 192 35.4
Gohir.D02G169000 Gossypium hirsutum HOM05D004612 ORTHO05D004940 2.9e-16 90.5 69 69.6
SEGI_33425 Sequoiadendron giganteum HOM05D004612 ORTHO05D004940 2.9e-16 90.5 91 53.8
SEGI_15231 Sequoiadendron giganteum HOM05D004612 ORTHO05D004940 3.6e-14 83.6 95 54.7
vmacro13311 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 8.0e-14 82.4 214 33.6
Lsat_1_v5_gn_5_81800 Lactuca sativa HOM05D004612 ORTHO05D004940 5.7e-12 76.3 70 58.6
Cre11.g480750 Chlamydomonas reinhardtii HOM05D004612 ORTHO05D004940 2.8e-11 73.9 169 36.1
CBR_g30725 Chara braunii HOM05D004612 ORTHO05D004940 1.1e-10 72.0 168 30.4
Actinidia20931 Actinidia chinensis HOM05D004612 ORTHO05D004940 1.4e-10 71.6 48 75.0
Atru.chr5.446 Acer truncatum HOM05D004612 ORTHO05D004940 1.8e-10 71.2 80 51.2
RcHm_v2.0_Chr1g0353681 Rosa chinensis HOM05D004612 ORTHO05D004940 3.2e-10 70.5 42 83.3
MD01G1053500 Malus domestica HOM05D004612 ORTHO05D004940 9.2e-10 68.9 66 57.6
CSS0015544 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 1.7e-08 64.7 82 52.4
Phvul.003G182400 Phaseolus vulgaris HOM05D002101 ORTHO05D002126 1.7e-08 64.7 211 26.1
CSS0007523 Camellia sinensis var. sinensis HOM05D025959 ORTHO05D111461 2.3e-08 64.3 61 60.7
VMungo1215G0661 Vigna mungo HOM05D002101 ORTHO05D002126 3.9e-08 63.5 211 25.6
Hund09953 Selenicereus undatus HOM05D002101 ORTHO05D002126 1.5e-07 61.6 300 27.0
BraA09t39921Z Brassica rapa HOM05D000302 ORTHO05D001604 1.9e-07 61.2 45 62.2
QL10p020674 Quercus lobata HOM05D002101 ORTHO05D002126 2.5e-07 60.8 348 22.7
CDE05G2136 Ceratophyllum demersum HOM05D004612 ORTHO05D004940 4.3e-07 60.1 88 43.2
MBI17_g08172_MAGBIO Magnolia biondii HOM05D004612 ORTHO05D004940 5.6e-07 59.7 49 63.3
MBI19_g00143_MAGBIO Magnolia biondii HOM05D002101 ORTHO05D002126 5.6e-07 59.7 218 26.6
QL10p020694 Quercus lobata HOM05D002101 ORTHO05D002126 5.6e-07 59.7 271 22.9
Ah.02g114210 Amaranthus hybridus HOM05D002101 ORTHO05D002126 7.3e-07 59.3 270 25.2
arahy.Tifrunner.gnm1.ann1.I7FZVG Arachis hypogaea HOM05D002101 ORTHO05D002126 7.3e-07 59.3 217 24.9
GSVIVG01008150001 Vitis vinifera HOM05D002101 ORTHO05D002126 7.3e-07 59.3 267 24.0
Gohir.D12G186900 Gossypium hirsutum HOM05D002101 ORTHO05D002126 9.5e-07 58.9 293 24.6
Lj4g0024769 Lotus japonicus HOM05D002101 ORTHO05D002126 9.5e-07 58.9 209 23.4
arahy.Tifrunner.gnm1.ann1.F85LVX Arachis hypogaea HOM05D002101 ORTHO05D002126 1.2e-06 58.5 210 23.8
AUR62039670 Chenopodium quinoa HOM05D002101 ORTHO05D002126 1.2e-06 58.5 219 27.9
Gorai.008G200400 Gossypium raimondii HOM05D002101 ORTHO05D002126 1.6e-06 58.2 267 25.1
arahy.Tifrunner.gnm1.ann1.H2CSA7 Arachis hypogaea HOM05D002101 ORTHO05D002126 2.1e-06 57.8 217 24.4
Medtr4g109900 Medicago truncatula HOM05D002101 ORTHO05D002126 2.1e-06 57.8 282 24.1
ATR0827G117 Amborella trichopoda HOM05D002101 ORTHO05D002126 2.8e-06 57.4 220 25.9
Nn4g23531 Nelumbo nucifera HOM05D002101 ORTHO05D002126 2.8e-06 57.4 218 23.9
PSO063G1236 Papaver somniferum HOM05D002101 ORTHO05D002126 2.8e-06 57.4 321 23.1
Gohir.D12G187000 Gossypium hirsutum HOM05D002101 ORTHO05D002126 3.6e-06 57.0 267 24.7
Ah.11g047450 Amaranthus hybridus HOM05D002101 ORTHO05D002126 4.7e-06 56.6 213 25.4
Aqoxy3G03735 Aquilegia oxysepala HOM05D002101 ORTHO05D002126 4.7e-06 56.6 267 22.8
COL.COLO4_27489 Corchorus olitorius HOM05D002101 ORTHO05D002126 4.7e-06 56.6 209 25.4
Eucgr.B00637 Eucalyptus grandis HOM05D002101 ORTHO05D002126 4.7e-06 56.6 210 25.7
Eucgr.B00638 Eucalyptus grandis HOM05D002101 ORTHO05D002126 4.7e-06 56.6 210 25.7
Haze_18508 Corylus avellana HOM05D002101 ORTHO05D002126 6.1e-06 56.2 271 21.8
Glyma.05G018300 Glycine max HOM05D002101 ORTHO05D002126 6.1e-06 56.2 269 25.3
CSS0013573 Camellia sinensis var. sinensis HOM05D002101 ORTHO05D002126 8.0e-06 55.8 292 23.6
CSS0028325 Camellia sinensis var. sinensis HOM05D002101 ORTHO05D002126 8.0e-06 55.8 292 23.6
Sed0014399 Sechium edule HOM05D002101 ORTHO05D002126 8.0e-06 55.8 208 23.1
TPR.G2026 Trifolium pratense HOM05D002101 ORTHO05D002126 8.0e-06 55.8 209 27.3


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