Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003922 Camellia sinensis var. sinensis HOM05D004307 ORTHO05D005068 4.1e-96 354.8 183 100.0
CSS0043383 Camellia sinensis var. sinensis HOM05D004307 ORTHO05D005068 1.2e-87 326.6 183 90.7
CSS0046203 Camellia sinensis var. sinensis HOM05D004307 ORTHO05D005068 1.7e-86 322.8 183 89.6
CSS0007994 Camellia sinensis var. sinensis HOM05D004307 ORTHO05D005068 5.6e-77 291.2 171 88.3
CSS0019674 Camellia sinensis var. sinensis HOM05D004307 ORTHO05D005068 5.0e-70 268.1 209 71.3
Actinidia38565 Actinidia chinensis HOM05D004307 ORTHO05D005068 1.6e-63 246.5 209 63.6
Rhsim04G0099800 Rhododendron simsii HOM05D004307 ORTHO05D005068 2.7e-63 245.7 209 64.6
QL07p021650 Quercus lobata HOM05D004307 ORTHO05D005068 1.9e-61 239.6 209 60.8
Atru.chr1.1037 Acer truncatum HOM05D004307 ORTHO05D005068 3.3e-61 238.8 209 61.2
CiPaw.09G035400 Carya illinoinensis HOM05D004307 ORTHO05D005068 4.3e-61 238.4 208 61.5
TAR623G0503 Trochodendron aralioides HOM05D004307 ORTHO05D005068 4.3e-61 238.4 209 62.2
GSVIVG01033325001 Vitis vinifera HOM05D004307 ORTHO05D005068 5.6e-61 238.0 209 61.2
Dinv18083 Davidia involucrata HOM05D004307 ORTHO05D005068 1.2e-60 236.9 209 62.2
Hma1.2p1_0247F.1_g101890 Hydrangea macrophylla HOM05D004307 ORTHO05D005068 3.6e-60 235.3 206 62.6
Dinv18082 Davidia involucrata HOM05D004307 ORTHO05D005068 4.7e-60 235.0 209 61.7
vmacro09093 Vaccinium macrocarpon HOM05D004307 ORTHO05D005068 4.7e-60 235.0 209 61.7
MD12G1066900 Malus domestica HOM05D004307 ORTHO05D005068 1.8e-59 233.0 209 59.8
Lj2C379G3 Lonicera japonica HOM05D004307 ORTHO05D005068 2.3e-59 232.6 208 60.6
COL.COLO4_28671 Corchorus olitorius HOM05D004307 ORTHO05D005068 6.8e-59 231.1 209 57.4
TWI74G0086 Tripterygium wilfordii HOM05D004307 ORTHO05D005068 8.9e-59 230.7 209 58.9
TWI77G0335 Tripterygium wilfordii HOM05D004307 ORTHO05D005068 8.9e-59 230.7 209 58.4
FAN02G1024 Fragaria x ananassa HOM05D004307 ORTHO05D005068 1.2e-58 230.3 209 59.3
RcHm_v2.0_Chr3g0481191 Rosa chinensis HOM05D004307 ORTHO05D005068 1.2e-58 230.3 209 59.3
Oeu033778.1 Olea europaea HOM05D004307 ORTHO05D005068 1.5e-58 229.9 215 58.1
Oeu008132.1 Olea europaea HOM05D004307 ORTHO05D005068 2.0e-58 229.6 208 59.6
FAN05G2241 Fragaria x ananassa HOM05D004307 ORTHO05D005068 2.6e-58 229.2 209 58.9
MD14G1067400 Malus domestica HOM05D004307 ORTHO05D005068 2.6e-58 229.2 209 59.3
Nn2g15471 Nelumbo nucifera HOM05D004307 ORTHO05D005068 2.6e-58 229.2 206 60.7
Duzib106G0148 Durio zibethinus HOM05D004307 ORTHO05D005068 4.4e-58 228.4 207 59.4
Glyma.10G099700 Glycine max HOM05D004307 ORTHO05D005068 4.4e-58 228.4 209 59.8
FAN14G1649 Fragaria x ananassa HOM05D004307 ORTHO05D005068 5.8e-58 228.0 209 58.9
Nitab4.5_0004660g0040 Nicotiana tabacum HOM05D004307 ORTHO05D005068 7.5e-58 227.6 209 58.9
PGR004G0326 Punica granatum HOM05D004307 ORTHO05D005068 7.5e-58 227.6 209 58.4
CAN.G77.1 Capsicum annuum HOM05D004307 ORTHO05D005068 9.9e-58 227.3 209 59.3
MSTRG.6447 Avicennia marina HOM05D004307 ORTHO05D005068 1.3e-57 226.9 209 58.4
CANSAT80G0325 Cannabis sativa HOM05D004307 ORTHO05D005068 1.3e-57 226.9 206 58.3
Cpa.g.sc92.12 Carica papaya HOM05D004307 ORTHO05D005068 1.3e-57 226.9 209 58.9
Cpa.g.sc92.13 Carica papaya HOM05D003478 ORTHO05D004196 1.3e-57 226.9 209 58.9
CiPaw.10G031500 Carya illinoinensis HOM05D004307 ORTHO05D005068 1.3e-57 226.9 209 58.9
Eucgr.A02396 Eucalyptus grandis HOM05D004307 ORTHO05D005068 1.7e-57 226.5 205 58.5
Lalb_Chr02g0156371 Lupinus albus HOM05D004307 ORTHO05D005068 1.7e-57 226.5 209 57.9
Phvul.007G255200 Phaseolus vulgaris HOM05D004307 ORTHO05D005068 2.9e-57 225.7 209 57.4
Ca_26681_v3 Cicer arietinum L. HOM05D004307 ORTHO05D005068 3.7e-57 225.3 209 57.4
BcaC07g40358 Brassica carinata HOM05D004307 ORTHO05D005068 8.3e-57 224.2 208 57.7
A09p50490 Brassica napus HOM05D004307 ORTHO05D005068 8.3e-57 224.2 208 57.2
BraA09t40500Z Brassica rapa HOM05D004307 ORTHO05D005068 8.3e-57 224.2 208 57.2
Gorai.006G138400 Gossypium raimondii HOM05D004307 ORTHO05D005068 8.3e-57 224.2 209 58.9
Sed0006443 Sechium edule HOM05D004307 ORTHO05D005068 1.1e-56 223.8 209 56.0
Cc06_g16610 Coffea canephora HOM05D004307 ORTHO05D005068 1.4e-56 223.4 209 58.9
MELO3C009666.2 Cucumis melo HOM05D004307 ORTHO05D005068 1.4e-56 223.4 209 55.5
Thhalv10005794m.g Eutrema salsugineum HOM05D004307 ORTHO05D005068 1.4e-56 223.4 208 57.2
Psat6g126960 Pisum sativum HOM05D004307 ORTHO05D005068 1.4e-56 223.4 207 57.0
Thecc.05G161800 Theobroma cacao HOM05D004307 ORTHO05D005068 1.9e-56 223.0 209 56.9
Glyma.02G181500 Glycine max HOM05D004307 ORTHO05D005068 2.4e-56 222.6 209 57.9
AUR62024400 Chenopodium quinoa HOM05D004307 ORTHO05D005068 3.2e-56 222.2 207 57.5
ClCG10G017170 Citrullus lanatus HOM05D004307 ORTHO05D005068 3.2e-56 222.2 214 54.7
Ciclev10004353m.g Citrus clementina HOM05D004307 ORTHO05D005068 3.2e-56 222.2 209 56.9
Gohir.D09G120900 Gossypium hirsutum HOM05D004307 ORTHO05D005068 3.2e-56 222.2 209 58.4
C08p33190 Brassica napus HOM05D004307 ORTHO05D005068 4.1e-56 221.9 208 56.7
BolC8t50921H Brassica oleracea HOM05D004307 ORTHO05D005068 4.1e-56 221.9 208 56.7
CsaV3_3G039220 Cucumis sativus L. HOM05D004307 ORTHO05D005068 4.1e-56 221.9 209 55.0
Peaxi162Scf00650g00226 Petunia axillaris HOM05D004307 ORTHO05D005068 4.1e-56 221.9 209 57.4
AUR62025994 Chenopodium quinoa HOM05D004307 ORTHO05D005068 5.4e-56 221.5 207 58.0
Sopen03g017080 Solanum pennellii HOM05D004307 ORTHO05D005068 5.4e-56 221.5 209 57.4
TPR.G29928 Trifolium pratense HOM05D004307 ORTHO05D005068 5.4e-56 221.5 207 57.0
PGSC0003DMG400019789 Solanum tuberosum HOM05D004307 ORTHO05D005068 7.1e-56 221.1 209 57.9
Nitab4.5_0002220g0030 Nicotiana tabacum HOM05D004307 ORTHO05D005068 9.2e-56 220.7 207 58.5
HanXRQChr15g0491231 Helianthus annuus HOM05D004307 ORTHO05D005068 1.2e-55 220.3 208 57.2
Aqoxy1G00236 Aquilegia oxysepala HOM05D004307 ORTHO05D005068 1.6e-55 219.9 206 58.7
AL5G39210 Arabidopsis lyrata HOM05D004307 ORTHO05D005068 1.6e-55 219.9 208 56.7
Gohir.A09G124100 Gossypium hirsutum HOM05D004307 ORTHO05D005068 1.6e-55 219.9 209 57.9
Potri.006G054800 Populus trichocarpa HOM05D004307 ORTHO05D005068 1.6e-55 219.9 209 57.9
Hund24740 Selenicereus undatus HOM05D004307 ORTHO05D005068 2.1e-55 219.5 206 57.3
Solyc03g063750.3 Solanum lycopersicum HOM05D004307 ORTHO05D005068 2.7e-55 219.2 209 57.4
FvH4_6g23260 Fragaria vesca HOM05D004307 ORTHO05D005068 3.5e-55 218.8 209 57.9
Medtr1g052730 Medicago truncatula HOM05D004307 ORTHO05D005068 4.6e-55 218.4 209 56.9
Sp5g04990 Schrenkiella parvula HOM05D004307 ORTHO05D005068 4.6e-55 218.4 208 55.3
Sed0010803 Sechium edule HOM05D004307 ORTHO05D005068 4.6e-55 218.4 209 54.5
Ah.04g151900 Amaranthus hybridus HOM05D004307 ORTHO05D005068 6.0e-55 218.0 207 56.0
arahy.Tifrunner.gnm1.ann1.6VN1VE Arachis hypogaea HOM05D004307 ORTHO05D005068 6.0e-55 218.0 209 55.0
AT3G57630 Arabidopsis thaliana HOM05D004307 ORTHO05D005068 7.8e-55 217.6 208 56.2
EL10Ac3g07020 Beta vulgaris HOM05D004307 ORTHO05D005068 7.8e-55 217.6 207 56.5
VMungo0720G0406 Vigna mungo HOM05D004307 ORTHO05D005068 1.0e-54 217.2 208 55.8
DCAR_013583 Daucus carota HOM05D004307 ORTHO05D005068 1.3e-54 216.9 206 57.3
Lj5g0012411 Lotus japonicus HOM05D004307 ORTHO05D005068 2.3e-54 216.1 209 55.5
Carub.0005s2447 Capsella rubella HOM05D004307 ORTHO05D005068 5.1e-54 214.9 208 55.3
Aa31LG10G12420 Aethionema arabicum HOM05D004307 ORTHO05D005068 6.6e-54 214.5 209 54.5
PSO675G4641 Papaver somniferum HOM05D004307 ORTHO05D005068 6.6e-54 214.5 206 55.8
ECA247G2115 Erigeron canadensis HOM05D003478 ORTHO05D005068 8.6e-54 214.2 209 56.0
PSO541G4071 Papaver somniferum HOM05D004307 ORTHO05D005068 1.9e-53 213.0 206 55.3
Lsat_1_v5_gn_9_27501 Lactuca sativa HOM05D004307 ORTHO05D005068 4.3e-53 211.8 206 56.8
MBI04_g28751_MAGBIO Magnolia biondii HOM05D004307 ORTHO05D005068 5.6e-53 211.5 206 57.3
THA.LOC104802308 Tarenaya hassleriana HOM05D004307 ORTHO05D005068 5.6e-53 211.5 209 53.1
CARHR167930 Cardamine hirsuta HOM05D004307 ORTHO05D005068 7.3e-53 211.1 202 57.4
SalBow6G2199 Salvia bowleyana HOM05D004307 ORTHO05D005068 2.1e-52 209.5 209 53.1
Sabra06G0038900 Salix brachista HOM05D004307 ORTHO05D005068 1.1e-51 207.2 238 50.0
SGA_v2.0_scaffold105G30444 Striga asiatica HOM05D004307 ORTHO05D005068 4.0e-51 205.3 208 53.4
Lalb_Chr05g0213601 Lupinus albus HOM05D004307 ORTHO05D005068 7.6e-50 201.1 220 51.4
unitig_578.g15987 Utricularia gibba HOM05D004307 ORTHO05D005068 3.8e-49 198.7 231 48.9
CDE05G2581 Ceratophyllum demersum HOM05D004307 ORTHO05D005068 4.9e-49 198.4 209 50.7
HPP92_020394 Vanilla planifolia HOM05D004307 ORTHO05D005068 1.1e-48 197.2 206 51.9
SEGI_15501 Sequoiadendron giganteum HOM05D004307 ORTHO05D005068 6.0e-47 191.4 208 51.4
Prupe.7G067200 Prunus persica HOM05D004307 ORTHO05D005068 5.1e-46 188.3 185 56.2
Haze_19902 Corylus avellana HOM05D004307 ORTHO05D005068 1.1e-45 187.2 331 37.5
ATR0605G138 Amborella trichopoda HOM05D004307 ORTHO05D005068 9.6e-45 184.1 208 49.5
Zm00001eb402060 Zea mays HOM05D004307 ORTHO05D005068 9.6e-45 184.1 207 49.8
Manes.09G028900 Manihot esculenta HOM05D004307 ORTHO05D005068 1.2e-39 167.2 174 55.7
CSS0038023 Camellia sinensis var. sinensis HOM05D004307 ORTHO05D005068 5.1e-38 161.8 146 63.0
SalBow6G4126 Salvia bowleyana HOM05D004307 ORTHO05D005068 1.1e-32 144.1 172 47.7
AagrBONN_evm.TU.Sc2ySwM_344.2396 Anthoceros agrestis HOM05D004307 ORTHO05D005068 3.2e-32 142.5 210 40.0
Pp3c4_26380 Physcomitrium patens HOM05D004307 ORTHO05D005068 9.3e-32 141.0 207 42.5
Glyma.03G139300 Glycine max HOM05D004307 ORTHO05D005068 3.1e-27 125.9 148 52.0
Mapoly0126s0040 Marchantia polymorpha HOM05D004307 ORTHO05D005068 9.0e-27 124.4 207 36.2
SHI29213 Sapria himalayana HOM05D004307 ORTHO05D000001 1.5e-26 123.6 115 58.3
Os03g0174300 Oryza sativa ssp. japonica HOM05D004307 ORTHO05D005068 2.9e-25 119.4 143 48.3
TAR627G0211 Trochodendron aralioides HOM05D000885 ORTHO05D008875 6.7e-22 108.2 102 58.8
Ca_26767_v3 Cicer arietinum L. HOM05D004307 ORTHO05D005068 2.4e-19 99.8 58 79.3
Cfa016853 Carpinus fangiana HOM05D004307 ORTHO05D005068 6.5e-09 65.1 35 80.0
SMO153G0012 Selaginella moellendorffii HOM05D004307 ORTHO05D005068 4.2e-08 62.4 60 48.3
SHI29208 Sapria himalayana HOM05D004307 ORTHO05D005068 7.9e-07 58.2 34 70.6
Actinidia17248 Actinidia chinensis HOM05D000188 ORTHO05D007437 8.8e-06 54.7 37 70.3


User provided reference genes

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