Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003918 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 1.2e-43 179.5 91 100.0
CSS0003707 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 9.9e-43 176.4 91 98.9
Hma1.2p1_0550F.1_g177300 Hydrangea macrophylla HOM05D007149 ORTHO05D008956 2.8e-37 158.3 89 86.5
Nn4g23775 Nelumbo nucifera HOM05D007149 ORTHO05D008956 3.7e-37 157.9 89 84.3
Manes.01G108800 Manihot esculenta HOM05D007149 ORTHO05D008956 1.4e-36 156.0 89 83.1
Actinidia36312 Actinidia chinensis HOM05D007149 ORTHO05D008956 1.8e-36 155.6 87 86.2
Solyc02g063085.1 Solanum lycopersicum HOM05D007149 ORTHO05D008956 1.8e-36 155.6 89 84.3
Actinidia15873 Actinidia chinensis HOM05D007149 ORTHO05D008956 2.4e-36 155.2 88 84.1
Cfa007939 Carpinus fangiana HOM05D007149 ORTHO05D008956 2.4e-36 155.2 89 83.1
Gohir.A07G071500 Gossypium hirsutum HOM05D007149 ORTHO05D008956 2.4e-36 155.2 89 83.1
Gorai.001G080200 Gossypium raimondii HOM05D007149 ORTHO05D008956 2.4e-36 155.2 89 83.1
Dinv34841 Davidia involucrata HOM05D007149 ORTHO05D008956 3.1e-36 154.8 86 88.4
Thecc.04G136400 Theobroma cacao HOM05D007149 ORTHO05D008956 6.9e-36 153.7 89 82.0
vmacro05569 Vaccinium macrocarpon HOM05D007149 ORTHO05D008956 9.0e-36 153.3 88 84.1
Peaxi162Scf00501g00121 Petunia axillaris HOM05D007149 ORTHO05D008956 1.2e-35 152.9 89 83.1
COL.COLO4_16183 Corchorus olitorius HOM05D007149 ORTHO05D008956 1.5e-35 152.5 89 80.9
Gohir.D07G076000 Gossypium hirsutum HOM05D007149 ORTHO05D008956 1.5e-35 152.5 88 83.0
Ca_13737_v3 Cicer arietinum L. HOM05D007149 ORTHO05D008956 2.0e-35 152.1 89 83.1
Ah.10g037580 Amaranthus hybridus HOM05D007149 ORTHO05D008956 2.6e-35 151.8 88 84.1
CAN.G953.15 Capsicum annuum HOM05D007149 ORTHO05D008956 2.6e-35 151.8 89 82.0
CiPaw.04G040600 Carya illinoinensis HOM05D007149 ORTHO05D008956 2.6e-35 151.8 89 82.0
Cc07_g08920 Coffea canephora HOM05D007149 ORTHO05D008956 3.4e-35 151.4 88 84.1
Sabra17G0093700 Salix brachista HOM05D007149 ORTHO05D008956 3.4e-35 151.4 89 79.8
Hund13727 Selenicereus undatus HOM05D007149 ORTHO05D008956 3.4e-35 151.4 88 83.0
Cpa.g.sc179.16 Carica papaya HOM05D007149 ORTHO05D008956 7.6e-35 150.2 88 81.8
HPP92_011090 Vanilla planifolia HOM05D007149 ORTHO05D008956 9.9e-35 149.8 89 80.9
Aa31LG11G13550 Aethionema arabicum HOM05D007149 ORTHO05D008956 1.3e-34 149.4 87 82.8
TWI74G0718 Tripterygium wilfordii HOM05D007149 ORTHO05D008956 1.3e-34 149.4 89 78.7
Phvul.004G064400 Phaseolus vulgaris HOM05D007149 ORTHO05D008956 1.7e-34 149.1 87 82.8
Ciclev10013207m.g Citrus clementina HOM05D007149 ORTHO05D008956 2.2e-34 148.7 86 82.6
Migut.H00206 Erythranthe guttata HOM05D007149 ORTHO05D008956 2.9e-34 148.3 89 80.9
CANSAT64G1005 Cannabis sativa HOM05D007149 ORTHO05D008956 3.8e-34 147.9 88 80.7
THA.LOC104803005 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 3.8e-34 147.9 88 83.0
CDE11G0018 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 4.9e-34 147.5 86 81.4
THA.LOC104827153 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 4.9e-34 147.5 86 83.7
CiPaw.03G060400 Carya illinoinensis HOM05D007149 ORTHO05D008956 6.4e-34 147.1 89 79.8
Lj2g0020616 Lotus japonicus HOM05D007149 ORTHO05D008956 8.4e-34 146.7 89 80.9
ATR0665G039 Amborella trichopoda HOM05D007149 ORTHO05D008956 1.1e-33 146.4 88 80.7
Eucgr.J01478 Eucalyptus grandis HOM05D007149 ORTHO05D008956 1.1e-33 146.4 89 79.8
HanXRQChr12g0376461 Helianthus annuus HOM05D007149 ORTHO05D008956 1.1e-33 146.4 88 81.8
QL02p051591 Quercus lobata HOM05D007149 ORTHO05D008956 1.1e-33 146.4 86 82.6
Aqoxy3G03934 Aquilegia oxysepala HOM05D007149 ORTHO05D008956 1.4e-33 146.0 89 79.8
Lalb_Chr04g0257361 Lupinus albus HOM05D007149 ORTHO05D008956 1.9e-33 145.6 89 78.7
Glyma.19G046200 Glycine max HOM05D007149 ORTHO05D008956 2.4e-33 145.2 85 82.4
Potri.017G113401 Populus trichocarpa HOM05D007149 ORTHO05D008956 2.4e-33 145.2 89 76.4
Sp6g28070 Schrenkiella parvula HOM05D007149 ORTHO05D008956 2.4e-33 145.2 85 83.5
Atru.chr8.867 Acer truncatum HOM05D007149 ORTHO05D008956 3.2e-33 144.8 86 82.6
EL10Ac2g04594 Beta vulgaris HOM05D007149 ORTHO05D008956 3.2e-33 144.8 86 81.4
FvH4_6g45250 Fragaria vesca HOM05D007149 ORTHO05D008956 4.2e-33 144.4 89 74.2
FAN09G4869 Fragaria x ananassa HOM05D007149 ORTHO05D008956 4.2e-33 144.4 89 74.2
FAN14G5255 Fragaria x ananassa HOM05D007149 ORTHO05D008956 4.2e-33 144.4 89 74.2
CARHR197250 Cardamine hirsuta HOM05D007149 ORTHO05D008956 5.5e-33 144.1 87 80.5
BcaC04g18912 Brassica carinata HOM05D007149 ORTHO05D008956 7.1e-33 143.7 85 82.4
A10p23000 Brassica napus HOM05D007149 ORTHO05D008956 7.1e-33 143.7 85 82.4
C09p60970 Brassica napus HOM05D007149 ORTHO05D008956 7.1e-33 143.7 85 82.4
BolC9t58944H Brassica oleracea HOM05D007149 ORTHO05D008956 7.1e-33 143.7 85 82.4
BraA10t44369Z Brassica rapa HOM05D007149 ORTHO05D008956 7.1e-33 143.7 85 82.4
DCAR_017207 Daucus carota HOM05D007149 ORTHO05D008956 7.1e-33 143.7 89 77.5
PGR004G0481 Punica granatum HOM05D007149 ORTHO05D008956 7.1e-33 143.7 87 80.5
Sc11g0008240 Simmondsia chinensis HOM05D007149 ORTHO05D008956 7.1e-33 143.7 88 79.5
unitig_899.g14509 Utricularia gibba HOM05D007149 ORTHO05D008956 7.1e-33 143.7 88 80.7
AL6G26940 Arabidopsis lyrata HOM05D007149 ORTHO05D008956 9.3e-33 143.3 85 82.4
Thhalv10015129m.g Eutrema salsugineum HOM05D007149 ORTHO05D008956 9.3e-33 143.3 85 82.4
Os03g0257900 Oryza sativa ssp. japonica HOM05D007149 ORTHO05D008956 1.2e-32 142.9 88 78.4
BcaB08g36883 Brassica carinata HOM05D007149 ORTHO05D008956 1.6e-32 142.5 85 82.4
Lsat_1_v5_gn_3_78860 Lactuca sativa HOM05D007149 ORTHO05D008956 1.6e-32 142.5 88 78.4
Zm00001eb011230 Zea mays HOM05D007149 ORTHO05D008956 2.1e-32 142.1 88 76.1
RcHm_v2.0_Chr2g0162971 Rosa chinensis HOM05D007149 ORTHO05D008956 6.0e-32 140.6 88 72.7
GSVIVG01031069001 Vitis vinifera HOM05D007149 ORTHO05D008956 6.0e-32 140.6 89 73.0
Carub.0006s1425 Capsella rubella HOM05D007149 ORTHO05D008956 7.9e-32 140.2 85 80.0
PSO782G5258 Papaver somniferum HOM05D007149 ORTHO05D008956 7.9e-32 140.2 86 79.1
Medtr0024s0060 Medicago truncatula HOM05D007149 ORTHO05D008956 1.0e-31 139.8 83 83.1
Psat1g079040 Pisum sativum HOM05D007149 ORTHO05D008956 1.3e-31 139.4 85 80.0
AT5G16060 Arabidopsis thaliana HOM05D007149 ORTHO05D008956 2.3e-31 138.7 85 78.8
CsaV3_5G039180 Cucumis sativus L. HOM05D007149 ORTHO05D008956 2.3e-31 138.7 86 76.7
PSO063G3907 Papaver somniferum HOM05D007149 ORTHO05D008956 6.7e-31 137.1 86 77.9
MELO3C022093.2 Cucumis melo HOM05D007149 ORTHO05D008956 8.7e-31 136.7 86 76.7
FAN09G3419 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.5e-30 136.0 100 66.0
MD17G1105000 Malus domestica HOM05D007149 ORTHO05D008956 3.3e-30 134.8 88 71.6
MD07G1095900 Malus domestica HOM05D007149 ORTHO05D008956 7.4e-30 133.7 86 73.3
Sed0025185 Sechium edule HOM05D007149 ORTHO05D008956 7.4e-30 133.7 85 76.5
Duzib133G0440 Durio zibethinus HOM05D007149 ORTHO05D008956 2.8e-29 131.7 126 56.3
FAN02G3200 Fragaria x ananassa HOM05D007149 ORTHO05D008956 6.2e-29 130.6 101 62.4
PGSC0003DMG400024179 Solanum tuberosum HOM05D007149 ORTHO05D008956 1.4e-28 129.4 73 83.6
Nn3g17784 Nelumbo nucifera HOM05D007149 ORTHO05D008956 2.4e-28 128.6 90 71.1
Haze_14138 Corylus avellana HOM05D007149 ORTHO05D008956 1.5e-27 125.9 69 87.0
Nitab4.5_0001569g0020 Nicotiana tabacum HOM05D007149 ORTHO05D008956 2.2e-26 122.1 67 86.6
TPR.G32450 Trifolium pratense HOM05D007149 ORTHO05D008956 8.4e-26 120.2 140 52.1
Aa31LG2G17140 Aethionema arabicum HOM05D007149 ORTHO05D008956 1.4e-25 119.4 70 78.6
arahy.Tifrunner.gnm1.ann1.2T9F1Z Arachis hypogaea HOM05D007149 ORTHO05D008956 1.4e-25 119.4 72 77.8
arahy.Tifrunner.gnm1.ann1.HVR4ZG Arachis hypogaea HOM05D007149 ORTHO05D008956 1.4e-25 119.4 72 77.8
CDE05G2183 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 1.9e-25 119.0 67 85.1
SalBow3G3356 Salvia bowleyana HOM05D007149 ORTHO05D008956 2.5e-25 118.6 68 83.8
Sopen02g014160 Solanum pennellii HOM05D007149 ORTHO05D008956 3.2e-25 118.2 66 81.8
SalBow6G3599 Salvia bowleyana HOM05D007149 ORTHO05D008956 4.6e-24 114.4 66 80.3
HPP92_011107 Vanilla planifolia HOM05D007149 ORTHO05D008956 7.9e-24 113.6 71 76.1
AagrBONN_evm.TU.Sc2ySwM_228.1220 Anthoceros agrestis HOM05D007149 ORTHO05D008956 1.1e-22 109.8 79 63.3
AUR62014527 Chenopodium quinoa HOM05D007149 ORTHO05D008956 1.1e-22 109.8 65 78.5
ClCG11G005400 Citrullus lanatus HOM05D007149 ORTHO05D008956 1.1e-22 109.8 66 80.3
SHI30170 Sapria himalayana HOM05D007149 ORTHO05D008956 1.9e-22 109.0 67 74.6
Carub.0055s0008 Capsella rubella HOM05D007149 ORTHO05D008956 3.3e-22 108.2 66 78.8
ECA246G4376 Erigeron canadensis HOM05D007149 ORTHO05D008956 5.7e-22 107.5 65 76.9
Prupe.3G238900 Prunus persica HOM05D007149 ORTHO05D008956 1.2e-19 99.8 63 69.8
Pp3c20_17910 Physcomitrium patens HOM05D007149 ORTHO05D008956 2.6e-19 98.6 81 59.3
SMO356G0237 Selaginella moellendorffii HOM05D007149 ORTHO05D008956 3.4e-19 98.2 81 59.3
Mapoly0073s0075 Marchantia polymorpha HOM05D007149 ORTHO05D008956 6.7e-15 84.0 63 58.7
SGA_v2.0_scaffold33G13472 Striga asiatica HOM05D007149 ORTHO05D008956 8.8e-15 83.6 45 80.0
RcHm_v2.0_Chr2g0163021 Rosa chinensis HOM05D007149 ORTHO05D008956 7.4e-14 80.5 67 61.2
PRCOL_00003753 Prasinoderma coloniale HOM05D007149 ORTHO05D008956 6.5e-10 67.4 79 44.3
MCO15G246 Micromonas commoda HOM05D007149 ORTHO05D008956 8.5e-10 67.0 71 43.7
Nitab4.5_0002288g0070 Nicotiana tabacum HOM05D007149 ORTHO05D008956 9.4e-09 63.5 37 86.5


User provided reference genes

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