Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003901 Camellia sinensis var. sinensis HOM05D008201 ORTHO05D005639 5.5e-91 338.2 255 100.0
TAR376G0148 Trochodendron aralioides HOM05D008201 ORTHO05D005639 3.8e-23 112.8 201 54.7
CiPaw.08G071500 Carya illinoinensis HOM05D008201 ORTHO05D005639 1.5e-19 100.9 217 54.4
HanXRQChr08g0216051 Helianthus annuus HOM05D008201 ORTHO05D005639 9.6e-19 98.2 181 58.6
Lj4A14T47 Lonicera japonica HOM05D008201 ORTHO05D005639 9.6e-19 98.2 206 43.7
Aqoxy6G01838 Aquilegia oxysepala HOM05D008201 ORTHO05D005639 6.2e-18 95.5 179 51.4
Dinv39575 Davidia involucrata HOM05D008201 ORTHO05D005639 3.4e-16 89.7 208 54.3
Manes.05G140400 Manihot esculenta HOM05D008201 ORTHO05D005639 3.4e-16 89.7 156 61.5
Haze_22743 Corylus avellana HOM05D025300 ORTHO05D005639 1.9e-14 84.0 247 42.9
Gorai.009G189500 Gossypium raimondii HOM05D008201 ORTHO05D005639 7.1e-14 82.0 144 60.4
Lsat_1_v5_gn_8_27820 Lactuca sativa HOM05D008201 ORTHO05D005639 1.2e-13 81.3 176 54.0
TAR628G0948 Trochodendron aralioides HOM05D008201 ORTHO05D005639 2.1e-13 80.5 190 51.6
Cfa014040 Carpinus fangiana HOM05D025300 ORTHO05D005639 2.7e-13 80.1 257 41.2
Dinv31918 Davidia involucrata HOM05D008201 ORTHO05D005639 2.7e-13 80.1 192 51.6
Gohir.A01G107800 Gossypium hirsutum HOM05D008201 ORTHO05D005639 1.8e-12 77.4 163 52.1
Oeu046328.1 Olea europaea HOM05D014976 ORTHO05D005639 8.7e-12 75.1 198 51.0
Gohir.A05G181000 Gossypium hirsutum HOM05D008201 ORTHO05D005639 1.5e-11 74.3 198 49.5
Gorai.002G119600 Gossypium raimondii HOM05D008201 ORTHO05D005639 1.9e-11 73.9 161 50.9
Prupe.1G356400 Prunus persica HOM05D008201 ORTHO05D005639 1.9e-11 73.9 186 53.2
Oeu016882.1 Olea europaea HOM05D008201 ORTHO05D005639 3.3e-11 73.2 194 48.5
Gohir.D01G094300 Gossypium hirsutum HOM05D008201 ORTHO05D005639 4.3e-11 72.8 161 47.2
vmacro04391 Vaccinium macrocarpon HOM05D008201 ORTHO05D005639 1.3e-10 71.2 171 54.4
Actinidia17030 Actinidia chinensis HOM05D000356 ORTHO05D000265 1.6e-10 70.9 189 50.8
Potri.005G248100 Populus trichocarpa HOM05D008201 ORTHO05D005639 1.6e-10 70.9 202 50.0
Carub.0002s2307 Capsella rubella HOM05D008570 ORTHO05D005639 2.8e-10 70.1 182 43.4
Ciclev10002349m.g Citrus clementina HOM05D008201 ORTHO05D005639 2.8e-10 70.1 186 48.4
FAN27G2977 Fragaria x ananassa HOM05D008201 ORTHO05D005639 2.8e-10 70.1 222 45.0
FAN20G0338 Fragaria x ananassa HOM05D008201 ORTHO05D005639 3.7e-10 69.7 222 44.1
arahy.Tifrunner.gnm1.ann1.QP4M0U Arachis hypogaea HOM05D008201 ORTHO05D005639 6.3e-10 68.9 235 36.2
BolC2t09364H Brassica oleracea HOM05D008570 ORTHO05D005639 6.3e-10 68.9 182 44.5
Sabra05G0191700 Salix brachista HOM05D008201 ORTHO05D005639 2.4e-09 67.0 185 38.4
Duzib093G2238 Durio zibethinus HOM05D008201 ORTHO05D005639 3.1e-09 66.6 65 61.5
FvH4_2g37690 Fragaria vesca HOM05D008201 ORTHO05D005639 3.1e-09 66.6 200 43.5
FAN15G2778 Fragaria x ananassa HOM05D008201 ORTHO05D005639 4.1e-09 66.2 222 44.1
Hma1.2p1_1100F.1_g257080 Hydrangea macrophylla HOM05D008201 ORTHO05D005639 4.1e-09 66.2 212 46.2
Actinidia37964 Actinidia chinensis HOM05D017236 ORTHO05D005639 1.5e-08 64.3 107 65.4
BcaC08g47283 Brassica carinata HOM05D008570 ORTHO05D005639 3.4e-08 63.2 194 33.0
BolC6t40053H Brassica oleracea HOM05D008570 ORTHO05D005639 3.4e-08 63.2 194 33.0
CiPaw.07G140900 Carya illinoinensis HOM05D008201 ORTHO05D005639 5.8e-08 62.4 176 51.7
Rhsim07G0253800 Rhododendron simsii HOM05D008201 ORTHO05D005639 5.8e-08 62.4 178 52.2
ECA233G2943 Erigeron canadensis HOM05D002022 ORTHO05D002056 7.6e-08 62.0 180 48.3
AL2G36240 Arabidopsis lyrata HOM05D008570 ORTHO05D005639 1.0e-07 61.6 86 47.7
Hund01744 Selenicereus undatus HOM05D017236 ORTHO05D005639 1.3e-07 61.2 169 48.5
AT1G76180 Arabidopsis thaliana HOM05D008570 ORTHO05D005639 3.8e-07 59.7 142 50.7
CDE04G1989 Ceratophyllum demersum HOM05D064241 ORTHO05D005639 5.0e-07 59.3 69 50.7
Cc10_g00870 Coffea canephora HOM05D014976 ORTHO05D005639 5.0e-07 59.3 160 54.4
Lj1g0003360 Lotus japonicus HOM05D015205 ORTHO05D005639 5.0e-07 59.3 181 49.2
THA.LOC104809672 Tarenaya hassleriana HOM05D008570 ORTHO05D005639 5.0e-07 59.3 158 36.7
CARHR069730 Cardamine hirsuta HOM05D008570 ORTHO05D005639 6.5e-07 58.9 162 46.3
Glyma.04G009400 Glycine max HOM05D008201 ORTHO05D005639 8.4e-07 58.5 163 51.5
Thecc.08G055500 Theobroma cacao HOM05D008201 ORTHO05D005639 1.4e-06 57.8 97 48.5
Eucgr.F01726 Eucalyptus grandis HOM05D008201 ORTHO05D005639 4.2e-06 56.2 179 35.2
Sed0012310 Sechium edule HOM05D024756 ORTHO05D005639 4.2e-06 56.2 181 47.5
vmacro21832 Vaccinium macrocarpon HOM05D008201 ORTHO05D005639 4.2e-06 56.2 177 49.2
Aqoxy5G01059 Aquilegia oxysepala HOM05D008201 ORTHO05D005639 5.5e-06 55.8 158 43.7
Lsat_1_v5_gn_8_28441 Lactuca sativa HOM05D008570 ORTHO05D005639 5.5e-06 55.8 164 35.4


User provided reference genes

Program Settings