Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003880 Camellia sinensis var. sinensis HOM05D012925 ORTHO05D004773 1.5e-230 802.7 475 100.0
CSS0035773 Camellia sinensis var. sinensis HOM05D012925 ORTHO05D004773 8.7e-106 388.3 418 66.3
CSS0023106 Camellia sinensis var. sinensis HOM05D012925 ORTHO05D004773 2.7e-99 366.7 379 66.5
CSS0014068 Camellia sinensis var. sinensis HOM05D012925 ORTHO05D004773 3.1e-95 353.2 360 67.8
CSS0041897 Camellia sinensis var. sinensis HOM05D012925 ORTHO05D004773 4.0e-95 352.8 381 64.8
CSS0004819 Camellia sinensis var. sinensis HOM05D012925 ORTHO05D004773 1.3e-93 347.8 386 64.0
CSS0041735 Camellia sinensis var. sinensis HOM05D012925 ORTHO05D004773 1.7e-93 347.4 381 63.8
CSS0019430 Camellia sinensis var. sinensis HOM05D012925 ORTHO05D004773 3.8e-93 346.3 418 58.9
CSS0026395 Camellia sinensis var. sinensis HOM05D012925 ORTHO05D004773 1.1e-92 344.7 381 64.3
CSS0038417 Camellia sinensis var. sinensis HOM05D012925 ORTHO05D004773 1.4e-92 344.4 418 59.6
CSS0032210 Camellia sinensis var. sinensis HOM05D012925 ORTHO05D004773 1.1e-89 334.7 381 62.7
CSS0035229 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 2.0e-65 254.2 204 66.2
CSS0037911 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 3.3e-65 253.4 204 66.2
CSS0021643 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 4.4e-65 253.1 204 65.7
CSS0024962 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 7.4e-65 252.3 342 57.0
CSS0006434 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 1.7e-64 251.1 204 65.2
CSS0016677 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 4.8e-64 249.6 336 61.0
CSS0025634 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 1.5e-62 244.6 204 63.7
CSS0012445 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.4e-55 220.7 204 61.3
CSS0000200 Camellia sinensis var. sinensis HOM05D012925 ORTHO05D004773 7.2e-44 182.6 312 50.3
CSS0012507 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 3.1e-31 140.6 198 40.9
CSS0006298 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.4e-31 139.8 181 43.1
CSS0047046 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.2e-31 139.0 198 40.4
CSS0043688 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.2e-30 138.7 198 40.9
CSS0044930 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 2.0e-30 137.9 181 43.1
CSS0016254 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 1.7e-29 134.8 181 42.0
CSS0007642 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.8e-29 133.7 198 39.9
CSS0024954 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.6e-28 129.8 295 48.5
CSS0035044 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.1e-27 127.9 295 48.5
CSS0008128 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.3e-26 124.4 296 48.3
CSS0024773 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.8e-25 119.0 185 41.1
CSS0046475 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.2e-24 117.9 190 40.0
CSS0024514 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 6.4e-24 116.3 185 40.0
CSS0008641 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.0e-22 111.3 182 39.0
Atru.chr5.2454 Acer truncatum HOM05D003511 ORTHO05D004403 3.5e-22 110.5 175 37.1
CSS0040930 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.1e-20 105.5 211 35.1
CSS0011546 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.2e-19 102.1 180 36.1
CSS0046621 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.1e-19 101.3 296 43.6
CSS0016639 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.6e-19 100.5 182 37.4
CSS0041777 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 6.2e-19 99.8 179 35.2
Atru.chr3.3093 Acer truncatum HOM05D000045 ORTHO05D000067 8.0e-19 99.4 173 36.4
Rhsim05G0213300 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.4e-18 98.6 202 32.7
CSS0020853 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.1e-18 97.4 187 35.3
CSS0021123 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.6e-17 94.4 182 36.3
CSS0018197 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.9e-15 88.2 182 35.7
CSS0035306 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.2e-15 85.9 153 36.6
FvH4_1g15941 Fragaria vesca HOM05D000045 ORTHO05D004773 1.6e-14 85.1 183 30.6
COL.COLO4_25082 Corchorus olitorius HOM05D000045 ORTHO05D004773 2.3e-13 81.3 183 34.4
FvH4_3g31442 Fragaria vesca HOM05D000045 ORTHO05D000067 5.1e-13 80.1 178 33.7
CSS0041074 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.9e-12 78.2 182 32.4
CSS0015620 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D002132 1.2e-11 75.5 130 41.5
FvH4_7g13761 Fragaria vesca HOM05D000045 ORTHO05D000067 6.2e-11 73.2 80 42.5
TAR483G0002 Trochodendron aralioides HOM05D000045 ORTHO05D000067 6.8e-10 69.7 170 34.1
CSS0017444 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 8.9e-10 69.3 39 74.4
Ciclev10003358m.g Citrus clementina HOM05D000045 ORTHO05D000067 8.9e-10 69.3 110 34.5
COL.COLO4_20853 Corchorus olitorius HOM05D000045 ORTHO05D000067 8.9e-10 69.3 176 31.2
COL.COLO4_04948 Corchorus olitorius HOM05D000045 ORTHO05D000067 7.5e-09 66.2 174 29.9
COL.COLO4_29562 Corchorus olitorius HOM05D000045 ORTHO05D000067 1.3e-08 65.5 178 31.5
Rhsim03G0118100 Rhododendron simsii HOM05D000045 ORTHO05D000067 4.9e-08 63.5 168 35.1
TAR515G0006 Trochodendron aralioides HOM05D000045 ORTHO05D004773 6.4e-08 63.2 111 36.9
QL04p064028 Quercus lobata HOM05D000045 ORTHO05D000067 1.9e-07 61.6 177 29.9
QL07p011111 Quercus lobata HOM05D000045 ORTHO05D000067 1.9e-07 61.6 177 29.9
COL.COLO4_34876 Corchorus olitorius HOM05D000045 ORTHO05D000067 3.2e-07 60.8 183 27.9
QL04p086336 Quercus lobata HOM05D000045 ORTHO05D004773 5.4e-07 60.1 176 30.7
Ciclev10029928m.g Citrus clementina HOM05D000045 ORTHO05D004773 7.1e-07 59.7 97 36.1
COL.COLO4_20433 Corchorus olitorius HOM05D000045 ORTHO05D000067 7.1e-07 59.7 183 27.3
Atru.chr8.1689 Acer truncatum HOM05D000045 ORTHO05D000067 1.6e-06 58.5 123 30.9
Ciclev10027335m.g Citrus clementina HOM05D000045 ORTHO05D000611 2.7e-06 57.8 124 30.6
Rhsim03G0106600 Rhododendron simsii HOM05D000045 ORTHO05D000067 6.0e-06 56.6 186 30.6
CSS0045912 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.8e-06 56.2 78 43.6
QL01p039642 Quercus lobata HOM05D000045 ORTHO05D000067 7.8e-06 56.2 172 30.2
QL04p049080 Quercus lobata HOM05D000045 ORTHO05D000067 7.8e-06 56.2 172 30.2


User provided reference genes

Program Settings