Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003836 Camellia sinensis var. sinensis HOM05D009881 ORTHO05D011059 2.4e-201 705.3 361 100.0
Actinidia31496 Actinidia chinensis HOM05D012601 ORTHO05D011059 5.1e-58 229.2 395 44.1
Dinv21695 Davidia involucrata HOM05D012601 ORTHO05D011059 2.8e-56 223.4 404 42.1
Rhsim07G0119100 Rhododendron simsii HOM05D012601 ORTHO05D011059 8.5e-53 211.8 372 46.2
Dinv28869 Davidia involucrata HOM05D012601 ORTHO05D011059 7.4e-41 172.2 417 36.7
Actinidia10863 Actinidia chinensis HOM05D012601 ORTHO05D011059 1.9e-28 131.0 240 41.7
Nitab4.5_0012140g0020 Nicotiana tabacum HOM05D009881 ORTHO05D011059 9.4e-28 128.6 397 30.7
Dinv15587 Davidia involucrata HOM05D012601 ORTHO05D011059 1.3e-24 118.2 310 35.8
Sopen08g026460 Solanum pennellii HOM05D009881 ORTHO05D011059 1.7e-24 117.9 394 30.7
Solyc08g077950.1 Solanum lycopersicum HOM05D009881 ORTHO05D011059 2.2e-24 117.5 398 30.2
Nitab4.5_0000500g0180 Nicotiana tabacum HOM05D009881 ORTHO05D011059 6.3e-24 115.9 409 29.8
Oeu007318.1 Olea europaea HOM05D009881 ORTHO05D011059 2.4e-23 114.0 412 31.6
PGSC0003DMG400026223 Solanum tuberosum HOM05D009881 ORTHO05D011059 7.0e-23 112.5 402 31.1
PGSC0003DMG400026589 Solanum tuberosum HOM05D009881 ORTHO05D011059 2.0e-22 110.9 389 29.0
SGA_v2.0_scaffold69G23156 Striga asiatica HOM05D001352 ORTHO05D011059 8.0e-19 99.0 402 27.4
Peaxi162Scf00544g00016 Petunia axillaris HOM05D009881 ORTHO05D011059 1.2e-17 95.1 380 28.4
Dinv38182 Davidia involucrata HOM05D000755 ORTHO05D011059 9.8e-17 92.0 346 32.7
CiPaw.11G070200 Carya illinoinensis HOM05D016577 ORTHO05D013291 1.1e-15 88.6 415 29.2
Sopen12g034020 Solanum pennellii HOM05D009881 ORTHO05D011059 5.4e-15 86.3 403 25.3
Dinv27361 Davidia involucrata HOM05D012601 ORTHO05D011059 7.0e-15 85.9 291 33.7
Solyc12g099350.1 Solanum lycopersicum HOM05D009881 ORTHO05D011059 2.7e-14 84.0 401 25.4
Sed0026962 Sechium edule HOM05D029038 ORTHO05D013291 3.5e-14 83.6 352 28.7
Dinv07634 Davidia involucrata HOM05D012601 ORTHO05D011059 1.0e-13 82.0 291 33.0
TAR375G0689 Trochodendron aralioides HOM05D012601 ORTHO05D011059 1.3e-13 81.6 504 25.2
Lsat_1_v5_gn_4_15441 Lactuca sativa HOM05D009881 ORTHO05D011059 3.8e-13 80.1 356 29.2
ClCG10G002290 Citrullus lanatus HOM05D029038 ORTHO05D013291 8.6e-13 79.0 362 27.9
Nitab4.5_0003456g0060 Nicotiana tabacum HOM05D009881 ORTHO05D011059 8.6e-13 79.0 369 26.8
Nn6g33779 Nelumbo nucifera HOM05D020612 ORTHO05D013291 2.5e-12 77.4 411 28.2
MSTRG.11388 Avicennia marina HOM05D009881 ORTHO05D011059 5.5e-12 76.3 415 27.0
SGA_v2.0_scaffold69G23154 Striga asiatica HOM05D001103 ORTHO05D000954 3.6e-11 73.6 88 42.0
SGA_v2.0_scaffold104G30220 Striga asiatica HOM05D009881 ORTHO05D011059 6.1e-11 72.8 368 27.4
SalBow6G1342 Salvia bowleyana HOM05D009881 ORTHO05D011059 1.8e-10 71.2 417 24.9
CsaV3_3G002330 Cucumis sativus L. HOM05D029038 ORTHO05D013291 2.3e-10 70.9 355 29.3
Atru.chr9.1223 Acer truncatum HOM05D017588 ORTHO05D019396 3.0e-10 70.5 378 26.7
Dinv00493 Davidia involucrata HOM05D012601 ORTHO05D001333 3.0e-10 70.5 273 31.9
Cc08_g11440 Coffea canephora HOM05D009881 ORTHO05D011059 6.8e-10 69.3 240 34.2
Prupe.5G058200 Prunus persica HOM05D018673 ORTHO05D020268 8.8e-10 68.9 348 28.4
MELO3C013903.2 Cucumis melo HOM05D029038 ORTHO05D013291 2.0e-09 67.8 350 27.4
QL12p008970 Quercus lobata HOM05D016577 ORTHO05D013291 2.6e-09 67.4 382 25.7
ECA233G4060 Erigeron canadensis HOM05D009881 ORTHO05D011059 4.4e-09 66.6 177 30.5
Psat4g075400 Pisum sativum HOM05D012763 ORTHO05D015065 9.8e-09 65.5 402 25.9
Ciclev10020707m.g Citrus clementina HOM05D017588 ORTHO05D019396 8.3e-08 62.4 253 28.9
CANSAT21G0374 Cannabis sativa HOM05D018673 ORTHO05D020268 3.1e-07 60.5 383 24.0
Nitab4.5_0000506g0130 Nicotiana tabacum HOM05D009881 ORTHO05D011059 3.1e-07 60.5 80 45.0
SGA_v2.0_scaffold199G41246 Striga asiatica HOM05D001352 ORTHO05D011059 1.2e-06 58.5 67 47.8
Lalb_Chr20g0110081 Lupinus albus HOM05D034499 ORTHO05D014589 1.6e-06 58.2 231 31.2
Sopen06g021090 Solanum pennellii HOM05D009881 ORTHO05D011059 1.6e-06 58.2 145 35.2
Migut.I01098 Erythranthe guttata HOM05D009881 ORTHO05D011059 3.5e-06 57.0 362 24.6
Glyma.05G000500 Glycine max HOM05D049022 ORTHO05D014589 3.5e-06 57.0 361 25.8
MELO3C002095.2 Cucumis melo HOM05D020612 ORTHO05D013291 5.9e-06 56.2 375 25.9
Manes.01G087600 Manihot esculenta HOM05D017588 ORTHO05D019396 5.9e-06 56.2 241 27.8


User provided reference genes

Program Settings