Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003820 Camellia sinensis var. sinensis HOM05D011223 ORTHO05D010778 7.8e-118 427.2 220 100.0
Actinidia18091 Actinidia chinensis HOM05D011223 ORTHO05D010778 4.2e-39 165.6 241 48.5
Dinv33878 Davidia involucrata HOM05D011223 ORTHO05D010778 2.4e-34 149.8 229 48.5
QL02p065009 Quercus lobata HOM05D012028 ORTHO05D010778 3.4e-28 129.4 218 45.9
Manes.01G104500 Manihot esculenta HOM05D011223 ORTHO05D010778 4.0e-21 105.9 231 39.0
Dinv34899 Davidia involucrata HOM05D004302 ORTHO05D004939 2.2e-19 100.1 209 38.8
Rhsim10G0060100 Rhododendron simsii HOM05D011223 ORTHO05D010778 1.1e-18 97.8 242 37.6
Dinv36819 Davidia involucrata HOM05D011223 ORTHO05D016556 1.8e-18 97.1 222 37.8
Cfa007707 Carpinus fangiana HOM05D012028 ORTHO05D010778 2.4e-18 96.7 242 38.4
Potri.017G102200 Populus trichocarpa HOM05D011223 ORTHO05D010778 4.1e-18 95.9 225 37.3
Manes.02G060950 Manihot esculenta HOM05D011223 ORTHO05D010778 1.5e-15 87.4 213 36.6
Actinidia36272 Actinidia chinensis HOM05D011223 ORTHO05D010778 1.9e-15 87.0 178 43.3
Sabra17G0088100 Salix brachista HOM05D011223 ORTHO05D010778 4.3e-15 85.9 223 35.0
Thecc.04G108700 Theobroma cacao HOM05D013808 ORTHO05D010778 5.6e-15 85.5 270 31.9
CiPaw.04G051300 Carya illinoinensis HOM05D011223 ORTHO05D010778 1.2e-14 84.3 247 36.8
Prupe.3G247600 Prunus persica HOM05D012028 ORTHO05D010778 8.9e-13 78.2 230 36.1
Sabra04G0072200 Salix brachista HOM05D011223 ORTHO05D010778 7.5e-12 75.1 247 32.4
TAR622G1316 Trochodendron aralioides HOM05D011223 ORTHO05D010778 2.9e-11 73.2 103 43.7
Nn4g23563 Nelumbo nucifera HOM05D011223 ORTHO05D010778 1.9e-10 70.5 224 33.9
Oeu032832.1 Olea europaea HOM05D014593 ORTHO05D016871 1.6e-09 67.4 217 29.0
Nn3g17567 Nelumbo nucifera HOM05D011223 ORTHO05D010778 8.6e-08 61.6 239 32.6
COL.COLO4_10646 Corchorus olitorius HOM05D013808 ORTHO05D010778 1.9e-07 60.5 119 42.0
Manes.06G080101 Manihot esculenta HOM05D014956 ORTHO05D016159 2.5e-07 60.1 232 30.6
Haze_14365 Corylus avellana HOM05D012028 ORTHO05D010778 2.8e-06 56.6 94 45.7
FvH4_6g46170 Fragaria vesca HOM05D012028 ORTHO05D010778 4.7e-06 55.8 216 29.2


User provided reference genes

Program Settings