Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003796 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.2e-103 379.8 189 100.0
CSS0031317 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.2e-98 363.2 193 95.3
CSS0013987 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 2.6e-98 362.1 193 94.8
CSS0041914 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 2.5e-96 355.5 197 92.4
CSS0045873 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.8e-94 349.4 194 93.3
CSS0045886 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.8e-94 349.4 194 93.3
CSS0023116 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 5.2e-94 347.8 194 93.3
CSS0041545 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 6.6e-57 224.6 174 70.7
CSS0042684 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 3.3e-56 222.2 174 70.7
Actinidia37211 Actinidia chinensis HOM05D007849 ORTHO05D009964 2.5e-48 196.1 132 73.5
Rhsim13G0083900 Rhododendron simsii HOM05D007849 ORTHO05D009964 3.6e-47 192.2 135 69.6
vmacro03084 Vaccinium macrocarpon HOM05D007849 ORTHO05D009964 5.8e-45 184.9 140 67.1
Dinv01583 Davidia involucrata HOM05D007849 ORTHO05D009964 8.1e-39 164.5 132 63.6
Dinv16985 Davidia involucrata HOM05D007849 ORTHO05D009964 8.1e-39 164.5 132 63.6
Dinv42934 Davidia involucrata HOM05D007849 ORTHO05D009964 8.1e-39 164.5 132 63.6
Dinv43166 Davidia involucrata HOM05D007849 ORTHO05D009964 8.1e-39 164.5 132 63.6
Lj2C1060G4 Lonicera japonica HOM05D007849 ORTHO05D009964 3.0e-33 146.0 121 60.3
QL01p032362 Quercus lobata HOM05D007849 ORTHO05D009964 3.9e-33 145.6 127 56.7
Oeu019202.2 Olea europaea HOM05D007849 ORTHO05D009964 5.1e-33 145.2 131 52.7
Cfa011488 Carpinus fangiana HOM05D007849 ORTHO05D009964 1.9e-32 143.3 121 56.2
TAR636G2131 Trochodendron aralioides HOM05D007849 ORTHO05D009964 2.5e-32 142.9 120 56.7
GSVIVG01024984001 Vitis vinifera HOM05D007849 ORTHO05D009964 4.3e-32 142.1 117 60.7
PSO339G6571 Papaver somniferum HOM05D007849 ORTHO05D009964 1.6e-31 140.2 125 52.8
Potri.009G029800 Populus trichocarpa HOM05D007849 ORTHO05D009964 1.1e-30 137.5 117 54.7
Duzib168G1667 Durio zibethinus HOM05D007849 ORTHO05D009964 3.1e-30 136.0 121 52.9
Hma1.2p1_1888F.1_g306580 Hydrangea macrophylla HOM05D007849 ORTHO05D009964 3.1e-30 136.0 121 55.4
Migut.N02673 Erythranthe guttata HOM05D007849 ORTHO05D009964 4.0e-30 135.6 121 51.2
SalBow2G0065 Salvia bowleyana HOM05D007849 ORTHO05D009964 4.0e-30 135.6 136 47.8
Manes.04G034000 Manihot esculenta HOM05D007849 ORTHO05D009964 5.3e-30 135.2 117 56.4
MBI14_g31252_MAGBIO Magnolia biondii HOM05D007849 ORTHO05D009964 1.2e-29 134.0 129 51.9
Sabra09G0020700 Salix brachista HOM05D007849 ORTHO05D009964 1.2e-29 134.0 117 53.8
RcHm_v2.0_Chr5g0064071 Rosa chinensis HOM05D007849 ORTHO05D009964 2.0e-29 133.3 131 55.0
SGA_v2.0_scaffold104G30123 Striga asiatica HOM05D007849 ORTHO05D009964 2.6e-29 132.9 129 49.6
MD03G1096200 Malus domestica HOM05D007849 ORTHO05D009964 4.5e-29 132.1 128 50.8
Gohir.D03G126500 Gossypium hirsutum HOM05D007849 ORTHO05D009964 1.3e-28 130.6 121 51.2
Haze_24080 Corylus avellana HOM05D007849 ORTHO05D009964 1.7e-28 130.2 157 43.9
Gohir.A03G041600 Gossypium hirsutum HOM05D007849 ORTHO05D009964 3.8e-28 129.0 121 49.6
Ciclev10029013m.g Citrus clementina HOM05D007849 ORTHO05D009964 4.9e-28 128.6 122 52.5
FvH4_3g35813 Fragaria vesca HOM05D007849 ORTHO05D009964 8.4e-28 127.9 131 50.4
Nn2g10385 Nelumbo nucifera HOM05D007849 ORTHO05D009964 8.4e-28 127.9 142 45.1
COL.COLO4_18494 Corchorus olitorius HOM05D007849 ORTHO05D009964 1.1e-27 127.5 126 49.2
Thecc.09G323300 Theobroma cacao HOM05D007849 ORTHO05D009964 4.2e-27 125.6 121 50.4
DCAR_018903 Daucus carota HOM05D007849 ORTHO05D009964 7.1e-27 124.8 140 45.0
FAN11G2231 Fragaria x ananassa HOM05D007849 ORTHO05D009964 7.1e-27 124.8 131 49.6
PGR102G2625 Punica granatum HOM05D007849 ORTHO05D009964 1.2e-26 124.0 121 50.4
CsaV3_6G016950 Cucumis sativus L. HOM05D007849 ORTHO05D009964 2.1e-26 123.2 120 47.5
Eucgr.B02377 Eucalyptus grandis HOM05D007849 ORTHO05D009964 4.6e-26 122.1 118 50.8
unitig_0.g229 Utricularia gibba HOM05D007849 ORTHO05D009964 6.0e-26 121.7 119 49.6
FAN21G0522 Fragaria x ananassa HOM05D007849 ORTHO05D009964 1.8e-25 120.2 102 56.9
Gorai.003G133000 Gossypium raimondii HOM05D007849 ORTHO05D009964 3.0e-25 119.4 136 44.9
Atru.chr2.2286 Acer truncatum HOM05D007849 ORTHO05D009964 2.5e-24 116.3 121 48.8
Atru.chr3.3864 Acer truncatum HOM05D007849 ORTHO05D009964 2.5e-24 116.3 121 48.8
TWI79G0095 Tripterygium wilfordii HOM05D007849 ORTHO05D009964 3.3e-24 115.9 121 45.5
Lsat_1_v5_gn_4_92200 Lactuca sativa HOM05D007849 ORTHO05D009964 7.4e-24 114.8 121 50.4
ClCG02G020250 Citrullus lanatus HOM05D007849 ORTHO05D009964 1.6e-23 113.6 134 45.5
Hund18918 Selenicereus undatus HOM05D007849 ORTHO05D009964 2.1e-23 113.2 129 48.1
Aqoxy6G02063 Aquilegia oxysepala HOM05D007849 ORTHO05D009964 2.8e-23 112.8 130 45.4
ECA236G2501 Erigeron canadensis HOM05D007849 ORTHO05D009964 2.8e-23 112.8 124 50.0
Zm00001eb012380 Zea mays HOM05D007849 ORTHO05D009964 4.0e-22 109.0 120 47.5
Os03g0275400 Oryza sativa ssp. japonica HOM05D007849 ORTHO05D009964 6.9e-22 108.2 122 47.5
AUR62001805 Chenopodium quinoa HOM05D007849 ORTHO05D009964 2.0e-21 106.7 141 46.8
EL10Ac7g16001 Beta vulgaris HOM05D007849 ORTHO05D009964 4.5e-21 105.5 132 46.2
ATR0559G278 Amborella trichopoda HOM05D007849 ORTHO05D009964 5.8e-21 105.1 125 38.4
Sed0012750 Sechium edule HOM05D007849 ORTHO05D009964 7.6e-21 104.8 135 38.5
AUR62009591 Chenopodium quinoa HOM05D007849 ORTHO05D009964 3.8e-20 102.4 131 45.0
SEGI_09096 Sequoiadendron giganteum HOM05D007849 ORTHO05D009964 4.6e-18 95.5 129 40.3
Ah.08g219350 Amaranthus hybridus HOM05D007849 ORTHO05D009964 6.0e-18 95.1 105 48.6
HanXRQChr05g0134521 Helianthus annuus HOM05D007849 ORTHO05D009964 2.5e-16 89.7 54 66.7
Zm00001eb397660 Zea mays HOM05D007849 ORTHO05D009964 2.1e-15 86.7 67 53.7
Prupe.6G079200 Prunus persica HOM05D007849 ORTHO05D009964 3.1e-14 82.8 75 56.0
HPP92_021135 Vanilla planifolia HOM05D007849 ORTHO05D009964 5.3e-14 82.0 118 39.8
Pp3c18_13380 Physcomitrium patens HOM05D007849 ORTHO05D009964 3.4e-13 79.3 95 42.1
MELO3C025926.2 Cucumis melo HOM05D007849 ORTHO05D009964 5.8e-13 78.6 94 41.5
Sed0025903 Sechium edule HOM05D007849 ORTHO05D009964 5.8e-13 78.6 49 65.3
MSTRG.12647 Avicennia marina HOM05D007849 ORTHO05D009964 3.5e-10 69.3 41 68.3
Mapoly0108s0012 Marchantia polymorpha HOM05D007849 ORTHO05D009964 5.7e-08 62.0 50 44.0
Cpa.g.sc81.165 Carica papaya HOM05D007849 ORTHO05D009964 1.4e-06 57.4 121 30.6
Gohir.D13G207600 Gossypium hirsutum HOM05D002026 ORTHO05D002291 1.8e-06 57.0 88 35.2
MSTRG.16651 Avicennia marina HOM05D002026 ORTHO05D002291 3.1e-06 56.2 100 31.0
Gohir.A13G201800 Gossypium hirsutum HOM05D002026 ORTHO05D002291 3.1e-06 56.2 89 36.0
Gorai.013G236500 Gossypium raimondii HOM05D002026 ORTHO05D002291 6.9e-06 55.1 89 36.0
Zm00001eb253040 Zea mays HOM05D001003 ORTHO05D007825 9.0e-06 54.7 65 35.4


User provided reference genes

Program Settings