Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003791 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 3.8e-166 588.2 314 100.0
CSS0029307 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.6e-111 406.8 300 77.0
CSS0022186 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 4.6e-95 352.1 316 64.9
CSS0032415 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 4.6e-95 352.1 319 63.9
CSS0010878 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 4.7e-92 342.0 311 60.8
CSS0027146 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 8.0e-92 341.3 331 61.3
CSS0030731 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 5.5e-48 195.7 320 43.1
CSS0042755 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 3.9e-46 189.5 241 49.4
CSS0003795 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D010101 5.6e-45 185.7 210 53.8
CSS0047661 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 7.4e-37 158.7 226 45.6
CSS0034581 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 5.3e-35 152.5 226 44.2
CSS0025888 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 4.5e-26 122.9 122 55.7
CSS0031884 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.1e-24 118.2 117 53.8
Haze_00406 Corylus avellana HOM05D000125 ORTHO05D010101 3.7e-20 103.2 102 51.0
QL09p028133 Quercus lobata HOM05D009378 ORTHO05D010101 6.3e-20 102.4 183 33.9
Haze_00427 Corylus avellana HOM05D000125 ORTHO05D010101 1.4e-19 101.3 97 51.5
Cfa013571 Carpinus fangiana HOM05D000125 ORTHO05D010101 5.3e-19 99.4 194 32.0
QL02p073603 Quercus lobata HOM05D000125 ORTHO05D010101 6.9e-19 99.0 105 49.5
QL09p024013 Quercus lobata HOM05D008014 ORTHO05D010101 6.9e-19 99.0 106 44.3
Cfa016027 Carpinus fangiana HOM05D009378 ORTHO05D010101 1.2e-18 98.2 140 40.7
Cpa.g.sc623.3 Carica papaya HOM05D009378 ORTHO05D010101 1.5e-18 97.8 203 29.6
QL04p029513 Quercus lobata HOM05D000125 ORTHO05D000120 2.0e-18 97.4 101 46.5
QL09p024149 Quercus lobata HOM05D009378 ORTHO05D010101 7.7e-18 95.5 105 47.6
QL09p024465 Quercus lobata HOM05D000125 ORTHO05D010101 7.7e-18 95.5 116 44.0
QL93p0209_0042 Quercus lobata HOM05D009378 ORTHO05D010101 7.7e-18 95.5 105 47.6
Haze_19953 Corylus avellana HOM05D009378 ORTHO05D010101 1.0e-17 95.1 118 43.2
TWI81G0642 Tripterygium wilfordii HOM05D000125 ORTHO05D010101 1.0e-17 95.1 203 31.5
QL04p029700 Quercus lobata HOM05D020596 ORTHO05D010101 1.3e-17 94.7 122 39.3
Haze_00404 Corylus avellana HOM05D000125 ORTHO05D010101 3.8e-17 93.2 111 43.2
QL04p029779 Quercus lobata HOM05D020596 ORTHO05D010101 8.5e-17 92.0 99 46.5
QL05p062837 Quercus lobata HOM05D009378 ORTHO05D010101 1.1e-16 91.7 142 42.3
QL09p024439 Quercus lobata HOM05D009378 ORTHO05D010101 2.5e-16 90.5 118 42.4
Cfa007320 Carpinus fangiana HOM05D000125 ORTHO05D010101 3.2e-16 90.1 221 33.0
Haze_00511 Corylus avellana HOM05D009378 ORTHO05D010101 3.2e-16 90.1 99 47.5
QL09p024175 Quercus lobata HOM05D009378 ORTHO05D010101 5.5e-16 89.4 100 48.0
QL09p024027 Quercus lobata HOM05D009378 ORTHO05D010101 1.2e-15 88.2 100 45.0
QL93p0209_0016 Quercus lobata HOM05D009378 ORTHO05D010101 1.2e-15 88.2 100 47.0
QL04p029334 Quercus lobata HOM05D020596 ORTHO05D010101 2.1e-15 87.4 122 39.3
QL04p029580 Quercus lobata HOM05D000125 ORTHO05D000120 2.7e-15 87.0 99 43.4
QL04p029877 Quercus lobata HOM05D020596 ORTHO05D010101 2.7e-15 87.0 99 43.4
Haze_13413 Corylus avellana HOM05D000125 ORTHO05D010101 4.7e-15 86.3 215 31.2
Cfa016030 Carpinus fangiana HOM05D000125 ORTHO05D010101 6.1e-15 85.9 177 32.8
CiPaw.06G031800 Carya illinoinensis HOM05D000125 ORTHO05D010101 6.1e-15 85.9 99 42.4
Haze_14777 Corylus avellana HOM05D000125 ORTHO05D010101 7.9e-15 85.5 98 50.0
Cfa016894 Carpinus fangiana HOM05D000125 ORTHO05D010101 5.2e-14 82.8 101 43.6
QL05p044270 Quercus lobata HOM05D000125 ORTHO05D007874 1.1e-13 81.6 99 41.4
Cpa.g.sc623.1 Carica papaya HOM05D009378 ORTHO05D010101 3.3e-13 80.1 105 43.8
Ciclev10014060m.g Citrus clementina HOM05D000125 ORTHO05D000120 3.3e-13 80.1 199 29.6
Cfa016029 Carpinus fangiana HOM05D009378 ORTHO05D010101 4.4e-13 79.7 120 38.3
Actinidia13806 Actinidia chinensis HOM05D000125 ORTHO05D030879 5.7e-13 79.3 127 38.6
Cfa016031 Carpinus fangiana HOM05D000125 ORTHO05D010101 7.4e-13 79.0 182 30.8
Actinidia13804 Actinidia chinensis HOM05D000125 ORTHO05D030879 3.7e-12 76.6 197 30.5
Eucgr.E00390 Eucalyptus grandis HOM05D009378 ORTHO05D010101 4.8e-12 76.3 105 38.1
Eucgr.E00393 Eucalyptus grandis HOM05D000125 ORTHO05D000120 4.8e-12 76.3 105 40.0
PGR031G1316 Punica granatum HOM05D000125 ORTHO05D010101 6.3e-12 75.9 187 27.3
Eucgr.E00385 Eucalyptus grandis HOM05D000125 ORTHO05D010101 1.1e-11 75.1 101 34.7
Actinidia02169 Actinidia chinensis HOM05D000125 ORTHO05D030879 1.8e-11 74.3 194 29.4
PGR042G0442 Punica granatum HOM05D000125 ORTHO05D000807 9.1e-11 72.0 110 37.3
Ciclev10027597m.g Citrus clementina HOM05D000125 ORTHO05D000120 3.5e-10 70.1 112 32.1
Ciclev10027164m.g Citrus clementina HOM05D000125 ORTHO05D000120 7.7e-10 68.9 105 29.5
CANSAT21G1400 Cannabis sativa HOM05D000125 ORTHO05D010101 1.0e-09 68.6 102 36.3
PGR042G3408 Punica granatum HOM05D000125 ORTHO05D000120 1.3e-09 68.2 145 31.7
PGR044G2047 Punica granatum HOM05D009378 ORTHO05D010101 2.9e-09 67.0 101 38.6
PGR031G1223 Punica granatum HOM05D009378 ORTHO05D010101 3.8e-09 66.6 105 36.2
CANSAT11G0593 Cannabis sativa HOM05D000125 ORTHO05D010101 5.0e-09 66.2 114 36.0
CANSAT11G2286 Cannabis sativa HOM05D000125 ORTHO05D010101 1.9e-08 64.3 114 35.1
Rhsim13G0216300 Rhododendron simsii HOM05D000448 ORTHO05D000291 1.9e-08 64.3 294 26.2
Sed0024411 Sechium edule HOM05D024292 ORTHO05D010101 5.5e-08 62.8 112 32.1
PGR102G3309 Punica granatum HOM05D000125 ORTHO05D010101 2.7e-07 60.5 125 32.8
CANSAT11G2008 Cannabis sativa HOM05D000125 ORTHO05D010101 3.6e-07 60.1 212 26.9
ClCG01G004320 Citrullus lanatus HOM05D024292 ORTHO05D010101 3.6e-07 60.1 126 28.6
Dinv20791 Davidia involucrata HOM05D000699 ORTHO05D000519 4.0e-06 56.6 141 27.7
ClCG01G004310 Citrullus lanatus HOM05D024292 ORTHO05D010101 5.2e-06 56.2 115 27.0


User provided reference genes

Program Settings