Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003774 Camellia sinensis var. sinensis HOM05D003836 ORTHO05D004556 1.2e-106 389.8 199 100.0
Dinv32673 Davidia involucrata HOM05D003836 ORTHO05D004556 2.3e-36 156.4 232 50.4
TAR374G0617 Trochodendron aralioides HOM05D003836 ORTHO05D004556 3.4e-27 125.9 224 42.0
TAR622G1236 Trochodendron aralioides HOM05D003836 ORTHO05D004556 1.0e-23 114.4 224 41.1
CiPaw.05G187900 Carya illinoinensis HOM05D003836 ORTHO05D004556 1.9e-22 110.2 234 37.2
Hma1.2p1_0658F.1_g197210 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 2.1e-21 106.7 227 40.5
GSVIVG01011621001 Vitis vinifera HOM05D003836 ORTHO05D004556 1.8e-20 103.6 218 39.9
ClCG11G007570 Citrullus lanatus HOM05D003836 ORTHO05D004556 1.7e-18 97.1 236 36.9
Haze_10840 Corylus avellana HOM05D003836 ORTHO05D004556 4.9e-18 95.5 242 38.0
Nn3g18432 Nelumbo nucifera HOM05D003836 ORTHO05D004556 1.2e-16 90.9 228 37.3
Nn4g24475 Nelumbo nucifera HOM05D003836 ORTHO05D004556 5.0e-15 85.5 231 39.4
CsaV3_7G022080 Cucumis sativus L. HOM05D003836 ORTHO05D004556 8.6e-15 84.7 236 34.7
QL03p038287 Quercus lobata HOM05D003836 ORTHO05D004556 3.3e-14 82.8 217 39.6
Hma1.2p1_1450F.1_g284160 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 5.6e-14 82.0 211 37.0
TWI74G0623 Tripterygium wilfordii HOM05D003836 ORTHO05D004556 5.6e-14 82.0 222 35.1
Sed0017171 Sechium edule HOM05D003836 ORTHO05D004556 1.2e-13 80.9 231 31.6
Cfa015051 Carpinus fangiana HOM05D003836 ORTHO05D004556 2.1e-13 80.1 242 35.1
Gorai.013G030000 Gossypium raimondii HOM05D003836 ORTHO05D004556 2.1e-13 80.1 209 38.3
Ciclev10014689m.g Citrus clementina HOM05D003836 ORTHO05D004556 4.7e-13 79.0 207 34.8
Lj6A734G74 Lonicera japonica HOM05D003836 ORTHO05D004556 1.1e-12 77.8 212 35.4
Thecc.02G307000 Theobroma cacao HOM05D003836 ORTHO05D004556 3.1e-12 76.3 213 35.2
MELO3C013236.2 Cucumis melo HOM05D003836 ORTHO05D004556 6.8e-12 75.1 236 33.9
MD13G1017500 Malus domestica HOM05D003836 ORTHO05D004556 8.9e-12 74.7 222 33.3
Ca_16122_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 1.2e-11 74.3 236 29.7
MD16G1015700 Malus domestica HOM05D003836 ORTHO05D004556 1.2e-11 74.3 214 34.1
Glyma.06G176300 Glycine max HOM05D003836 ORTHO05D004556 1.5e-11 73.9 207 32.9
Cpa.g.sc2.157 Carica papaya HOM05D003836 ORTHO05D004556 2.6e-11 73.2 229 35.4
PSO782G5172 Papaver somniferum HOM05D003836 ORTHO05D004556 2.6e-11 73.2 207 36.2
Glyma.04G189300 Glycine max HOM05D003836 ORTHO05D004556 3.4e-11 72.8 106 44.3
Duzib268G0198 Durio zibethinus HOM05D003836 ORTHO05D004556 4.4e-11 72.4 209 35.9
Phvul.009G172600 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 5.8e-11 72.0 208 34.1
COL.COLO4_27608 Corchorus olitorius HOM05D003836 ORTHO05D004556 1.7e-10 70.5 218 34.9
Manes.15G136900 Manihot esculenta HOM05D003836 ORTHO05D004556 1.7e-10 70.5 214 34.6
DCAR_023556 Daucus carota HOM05D003836 ORTHO05D004556 2.9e-10 69.7 205 36.1
Dinv02294 Davidia involucrata HOM05D003836 ORTHO05D004556 8.3e-10 68.2 53 67.9
Gohir.A12G154400 Gossypium hirsutum HOM05D003836 ORTHO05D004556 8.3e-10 68.2 210 33.8
FAN22G0514 Fragaria x ananassa HOM05D003836 ORTHO05D004556 3.2e-09 66.2 200 31.5
Lalb_Chr23g0273371 Lupinus albus HOM05D003836 ORTHO05D004556 4.1e-09 65.9 229 30.6
Medtr3g076570 Medicago truncatula HOM05D003836 ORTHO05D004556 5.4e-09 65.5 221 31.7
PSO063G7099 Papaver somniferum HOM05D003836 ORTHO05D004556 7.0e-09 65.1 209 36.4
Prupe.1G335900 Prunus persica HOM05D003836 ORTHO05D004556 9.2e-09 64.7 216 32.4
CAN.G17.4 Capsicum annuum HOM05D003836 ORTHO05D004556 1.2e-08 64.3 219 36.5
Lalb_Chr11g0070001 Lupinus albus HOM05D003836 ORTHO05D004556 1.2e-08 64.3 217 30.4
Gohir.A13G027900 Gossypium hirsutum HOM05D003836 ORTHO05D004556 1.6e-08 63.9 78 51.3
TPR.G35600 Trifolium pratense HOM05D003836 ORTHO05D004556 1.6e-08 63.9 217 30.9
Atru.chr7.2694 Acer truncatum HOM05D003836 ORTHO05D004556 3.5e-08 62.8 203 37.4
Migut.E00502 Erythranthe guttata HOM05D003836 ORTHO05D004556 3.5e-08 62.8 214 37.4
Peaxi162Scf00825g00424 Petunia axillaris HOM05D003836 ORTHO05D004556 3.5e-08 62.8 205 33.2
RcHm_v2.0_Chr4g0442391 Rosa chinensis HOM05D003836 ORTHO05D004556 3.5e-08 62.8 208 32.2
Eucgr.G02079 Eucalyptus grandis HOM05D003836 ORTHO05D004556 7.8e-08 61.6 114 40.4
Potri.010G103400 Populus trichocarpa HOM05D003836 ORTHO05D004556 7.8e-08 61.6 68 52.9
Gohir.D13G026700 Gossypium hirsutum HOM05D003836 ORTHO05D004556 1.0e-07 61.2 160 37.5
CANSAT78G2203 Cannabis sativa HOM05D003836 ORTHO05D004556 1.7e-07 60.5 78 51.3
unitig_8.g4015 Utricularia gibba HOM05D003836 ORTHO05D004556 3.9e-07 59.3 202 30.2
VMungo1309G0617 Vigna mungo HOM05D003836 ORTHO05D004556 3.9e-07 59.3 208 32.2
Aqoxy6G01037 Aquilegia oxysepala HOM05D003836 ORTHO05D004556 1.1e-06 57.8 137 32.1
FAN07G2679 Fragaria x ananassa HOM05D003836 ORTHO05D004556 1.9e-06 57.0 205 30.7
Sabra10G0076000 Salix brachista HOM05D003836 ORTHO05D004556 1.9e-06 57.0 211 33.2
arahy.Tifrunner.gnm1.ann1.FHB42U Arachis hypogaea HOM05D003836 ORTHO05D004556 2.5e-06 56.6 222 30.2
Lsat_1_v5_gn_3_104360 Lactuca sativa HOM05D003836 ORTHO05D004556 3.3e-06 56.2 221 34.8
Nitab4.5_0001516g0010 Nicotiana tabacum HOM05D003836 ORTHO05D004556 4.3e-06 55.8 227 33.5
Sopen06g017410 Solanum pennellii HOM05D003836 ORTHO05D004556 4.3e-06 55.8 217 35.5
Nitab4.5_0001227g0030 Nicotiana tabacum HOM05D003836 ORTHO05D004556 5.6e-06 55.5 225 32.4
Duzib251G0897 Durio zibethinus HOM05D003836 ORTHO05D004556 7.3e-06 55.1 207 31.9
FvH4_4g33240 Fragaria vesca HOM05D003836 ORTHO05D004556 7.3e-06 55.1 207 30.4


User provided reference genes

Program Settings