Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003759 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.2e-158 563.1 284 100.0
CSS0022173 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 9.3e-156 553.5 284 98.2
CSS0045394 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 7.9e-155 550.4 284 97.5
CSS0038208 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.9e-154 548.1 284 96.8
CSS0031004 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.1e-154 547.7 284 97.5
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.4e-140 503.1 280 91.4
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.2e-140 501.5 280 91.1
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.5e-140 501.1 280 91.1
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.1e-139 499.2 280 91.1
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.6e-139 498.4 280 91.1
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 7.9e-139 497.3 280 90.7
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 6.7e-138 494.2 280 90.0
Rhsim02G0017800 Rhododendron simsii HOM05D007798 ORTHO05D009882 6.4e-56 221.9 290 45.9
Rhsim01G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.9e-53 212.6 245 47.8
Rhsim11G0007300 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.9e-53 212.6 312 43.3
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.1e-51 206.8 258 46.1
Rhsim01G0063300 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.8e-51 206.5 279 41.2
Rhsim03G0060900 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.8e-51 205.7 271 43.5
Rhsim06G0104000 Rhododendron simsii HOM05D007798 ORTHO05D009882 9.9e-49 198.0 240 48.3
Rhsim05G0032900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.7e-48 197.2 287 43.2
Rhsim05G0212100 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.2e-48 196.8 220 47.7
Rhsim06G0120600 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.4e-48 195.3 276 44.2
RhsimUnG0063700 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.4e-47 194.1 276 43.8
RhsimUnG0041700 Rhododendron simsii HOM05D007798 ORTHO05D009882 9.3e-47 191.4 253 45.1
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 2.7e-46 189.9 252 43.3
CSS0004443 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 9.6e-44 181.4 137 61.3
CSS0001174 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.3e-43 181.0 137 61.3
CSS0001345 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.3e-43 181.0 137 61.3
CSS0013307 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.3e-43 181.0 137 61.3
CSS0017826 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.3e-43 181.0 137 61.3
CSS0026447 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.3e-43 181.0 137 61.3
CSS0026772 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.3e-43 181.0 137 61.3
CSS0049921 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.3e-43 181.0 137 61.3
CSS0003769 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.8e-43 179.9 137 60.6
CSS0047120 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 2.8e-43 179.9 137 60.6
Rhsim02G0156600 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.7e-43 179.5 150 56.7
Rhsim01G0150700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.3e-40 171.0 246 41.1
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 1.8e-37 160.6 286 35.3
QL05p078054 Quercus lobata HOM05D007798 ORTHO05D009882 3.9e-37 159.5 279 35.8
Actinidia04231 Actinidia chinensis HOM05D007798 ORTHO05D009882 1.3e-35 154.5 293 37.2
QL05p075545 Quercus lobata HOM05D007798 ORTHO05D009882 1.3e-35 154.5 278 34.5
Rhsim11G0017600 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.7e-35 152.9 126 59.5
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 1.1e-34 151.4 278 34.5
Rhsim09G0073700 Rhododendron simsii HOM05D007798 ORTHO05D009882 6.9e-34 148.7 232 37.9
Rhsim11G0005600 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.4e-33 146.4 185 45.4
Hma1.2p1_0849F.1_g228030 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 1.3e-29 134.4 165 43.6
QL04p082690 Quercus lobata HOM05D007798 ORTHO05D009882 1.9e-28 130.6 161 41.0
Actinidia33688 Actinidia chinensis HOM05D007798 ORTHO05D009882 4.3e-28 129.4 134 47.8
Rhsim11G0015900 Rhododendron simsii HOM05D007798 ORTHO05D009882 5.7e-28 129.0 235 33.6
CSS0011214 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D009882 9.7e-28 128.3 198 43.4
Rhsim05G0057700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.8e-26 124.0 194 40.7
Rhsim02G0157700 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.3e-26 122.5 214 40.7
Rhsim12G0212200 Rhododendron simsii HOM05D007798 ORTHO05D009882 6.1e-22 109.0 106 46.2
CSS0044986 Camellia sinensis var. sinensis HOM05D017353 ORTHO05D009882 8.2e-19 98.6 232 36.2
Rhsim09G0076000 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.2e-19 98.6 199 38.7
Actinidia38754 Actinidia chinensis HOM05D007798 ORTHO05D009882 4.1e-18 96.3 232 34.5
RhsimUnG0235000 Rhododendron simsii HOM05D007798 ORTHO05D009882 4.1e-18 96.3 87 48.3
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 2.6e-17 93.6 189 38.1
Rhsim11G0003100 Rhododendron simsii HOM05D007798 ORTHO05D009882 2.6e-17 93.6 161 41.6
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 4.5e-17 92.8 273 29.3
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 5.9e-17 92.4 274 28.5
Actinidia07485 Actinidia chinensis HOM05D007798 ORTHO05D009882 2.9e-16 90.1 197 31.5
Rhsim09G0074300 Rhododendron simsii HOM05D000791 ORTHO05D000669 3.8e-16 89.7 272 27.9
Hma1.2p1_0613F.1_g189140 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 1.1e-15 88.2 94 44.7
Actinidia03841 Actinidia chinensis HOM05D007798 ORTHO05D009882 1.9e-15 87.4 91 46.2
Hma1.2p1_0431F.1_g151610 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 5.5e-15 85.9 93 46.2
vmacro12525 Vaccinium macrocarpon HOM05D007798 ORTHO05D009882 5.5e-15 85.9 88 43.2
Rhsim03G0114400 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.2e-14 84.7 151 40.4
QL93p0053_0646 Quercus lobata HOM05D007798 ORTHO05D009882 4.4e-12 76.3 196 29.1
PSO384G0881 Papaver somniferum HOM05D017761 ORTHO05D000669 5.7e-12 75.9 169 30.8
CSS0021921 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.3e-11 74.7 63 57.1
MBI19_g18856_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.7e-11 74.3 182 28.0
MBI05_g43492_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.8e-11 73.6 159 30.2
MBI19_g27593_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.7e-11 73.2 221 25.3
CSS0029580 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 8.2e-11 72.0 150 30.0
CSS0037861 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 8.2e-11 72.0 150 30.0
CSS0039359 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 8.2e-11 72.0 150 30.0
MBI07_g22513_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.1e-10 71.6 185 27.0
CSS0005216 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.4e-10 71.2 155 28.4
CSS0004734 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.8e-10 70.9 45 71.1
Rhsim12G0114600 Rhododendron simsii HOM05D009565 ORTHO05D012252 2.4e-10 70.5 168 33.9
MBI19_g01025_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.1e-10 69.7 205 23.9
Rhsim10G0126600 Rhododendron simsii HOM05D009565 ORTHO05D012252 5.3e-10 69.3 157 29.3
Rhsim11G0006000 Rhododendron simsii HOM05D009565 ORTHO05D012252 5.3e-10 69.3 157 29.9
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.2e-09 68.2 175 28.0
MBI18_g17722_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.6e-09 67.8 138 28.3
Rhsim03G0038000 Rhododendron simsii HOM05D009565 ORTHO05D012252 2.0e-09 67.4 171 31.6
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 2.6e-09 67.0 161 25.5
MBI12_g43234_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.5e-09 66.6 201 27.4
Rhsim06G0127000 Rhododendron simsii HOM05D009565 ORTHO05D012252 3.5e-09 66.6 157 28.7
Rhsim04G0111400 Rhododendron simsii HOM05D009565 ORTHO05D012252 4.5e-09 66.2 162 32.7
vmacro00531 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 4.5e-09 66.2 192 26.0
CSS0032723 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 7.7e-09 65.5 67 52.2
MBI02_g29975_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.7e-09 65.5 171 26.9
MBI13_g12520_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.7e-09 65.5 201 27.9
MBI19_g18851_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.0e-08 65.1 169 28.4
Oeu006554.1 Olea europaea HOM05D017951 ORTHO05D020916 1.0e-08 65.1 150 27.3
MBI18_g19501_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.3e-08 64.7 149 26.8
vmacro13454 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.3e-08 64.7 178 27.0
Migut.O00380 Erythranthe guttata HOM05D023261 ORTHO05D000669 2.9e-08 63.5 159 28.3
MBI09_g39165_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.9e-08 63.5 151 28.5
vmacro12141 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 3.8e-08 63.2 172 27.3
Dinv24767 Davidia involucrata HOM05D000791 ORTHO05D000669 6.5e-08 62.4 172 22.7
Dinv31455 Davidia involucrata HOM05D000791 ORTHO05D000669 6.5e-08 62.4 172 22.7
RcHm_v2.0_Chr1g0346841 Rosa chinensis HOM05D009879 ORTHO05D009647 6.5e-08 62.4 174 29.9
Migut.B01385 Erythranthe guttata HOM05D023261 ORTHO05D000669 8.5e-08 62.0 174 25.9
RcHm_v2.0_Chr1g0346821 Rosa chinensis HOM05D009879 ORTHO05D009647 1.5e-07 61.2 174 29.9
Rhsim01G0183600 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.5e-07 60.5 153 30.1
Hma1.2p1_0101F.1_g049380 Hydrangea macrophylla HOM05D005507 ORTHO05D009882 3.2e-07 60.1 47 51.1
Dinv11320 Davidia involucrata HOM05D000791 ORTHO05D000669 4.2e-07 59.7 180 25.0
MBI15_g15098_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.2e-07 59.7 232 25.0
MBI19_g30599_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.2e-07 59.7 226 26.1
Rhsim09G0060200 Rhododendron simsii HOM05D008549 ORTHO05D010234 4.2e-07 59.7 221 23.5
vmacro04245 Vaccinium macrocarpon HOM05D017338 ORTHO05D010234 4.2e-07 59.7 308 25.0
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.5e-07 59.3 214 25.7
MBI12_g38023_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.2e-07 58.9 133 27.8
MBI19_g46209_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 9.4e-07 58.5 148 26.4
Migut.I00328 Erythranthe guttata HOM05D023261 ORTHO05D000222 1.2e-06 58.2 168 27.4
MBI11_g23002_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.2e-06 58.2 205 23.9
MBI16_g34343_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.2e-06 58.2 166 25.3
vmacro07116 Vaccinium macrocarpon HOM05D001028 ORTHO05D000827 1.6e-06 57.8 67 47.8
FAN03G0178 Fragaria x ananassa HOM05D009879 ORTHO05D009647 2.7e-06 57.0 175 30.3
MBI15_g13723_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.7e-06 57.0 171 26.3
FvH4_7g09790 Fragaria vesca HOM05D009879 ORTHO05D009647 3.6e-06 56.6 175 30.3
FAN06G0059 Fragaria x ananassa HOM05D009879 ORTHO05D009647 6.1e-06 55.8 175 29.7


User provided reference genes

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