Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003747 Camellia sinensis var. sinensis HOM05D005186 ORTHO05D006278 2.5e-50 201.8 103 100.0
Actinidia13575 Actinidia chinensis HOM05D005186 ORTHO05D006278 1.3e-22 109.8 65 86.2
Oeu022491.2 Olea europaea HOM05D005186 ORTHO05D006278 8.4e-22 107.1 69 79.7
Dinv28566 Davidia involucrata HOM05D005186 ORTHO05D006278 1.4e-21 106.3 68 80.9
Potri.012G126000 Populus trichocarpa HOM05D005186 ORTHO05D006278 1.4e-21 106.3 68 82.4
RcHm_v2.0_Chr1g0374461 Rosa chinensis HOM05D005186 ORTHO05D006278 2.4e-21 105.5 65 84.6
Ciclev10005111m.g Citrus clementina HOM05D005186 ORTHO05D006278 4.2e-21 104.8 69 79.7
DCAR_020192 Daucus carota HOM05D005186 ORTHO05D006278 5.4e-21 104.4 65 81.5
FvH4_7g27600 Fragaria vesca HOM05D005186 ORTHO05D006278 5.4e-21 104.4 65 83.1
FAN01G3063 Fragaria x ananassa HOM05D005186 ORTHO05D006278 5.4e-21 104.4 65 83.1
FAN03G1399 Fragaria x ananassa HOM05D005186 ORTHO05D006278 5.4e-21 104.4 65 83.1
FAN06G2498 Fragaria x ananassa HOM05D005186 ORTHO05D006278 5.4e-21 104.4 65 83.1
FAN06G5126 Fragaria x ananassa HOM05D005186 ORTHO05D006278 5.4e-21 104.4 65 83.1
Prupe.2G277700 Prunus persica HOM05D005186 ORTHO05D006278 5.4e-21 104.4 65 83.1
vmacro06793 Vaccinium macrocarpon HOM05D005186 ORTHO05D006278 7.1e-21 104.0 67 83.6
Duzib205G1009 Durio zibethinus HOM05D005186 ORTHO05D006278 9.2e-21 103.6 65 81.5
QL09p019611 Quercus lobata HOM05D005186 ORTHO05D006278 1.2e-20 103.2 65 81.5
Sabra15G0140200 Salix brachista HOM05D005186 ORTHO05D006278 1.2e-20 103.2 71 77.5
Sabra12G0094900 Salix brachista HOM05D005186 ORTHO05D006278 2.1e-20 102.4 68 79.4
Thecc.03G156500 Theobroma cacao HOM05D005186 ORTHO05D006278 2.1e-20 102.4 65 81.5
Eucgr.A02891 Eucalyptus grandis HOM05D005186 ORTHO05D006278 2.7e-20 102.1 65 76.9
CANSAT56G0052 Cannabis sativa HOM05D005186 ORTHO05D006278 3.5e-20 101.7 62 90.3
Haze_13870 Corylus avellana HOM05D005186 ORTHO05D006278 3.5e-20 101.7 91 64.8
FAN10G1701 Fragaria x ananassa HOM05D005186 ORTHO05D006278 4.6e-20 101.3 65 81.5
Potri.015G126800 Populus trichocarpa HOM05D005186 ORTHO05D006278 4.6e-20 101.3 68 79.4
SalBow2G2587 Salvia bowleyana HOM05D005186 ORTHO05D006278 4.6e-20 101.3 66 75.8
Peaxi162Scf00241g00318 Petunia axillaris HOM05D005186 ORTHO05D006278 7.8e-20 100.5 67 76.1
Lsat_1_v5_gn_2_129120 Lactuca sativa HOM05D005186 ORTHO05D006278 1.0e-19 100.1 69 75.4
Manes.06G135200 Manihot esculenta HOM05D005186 ORTHO05D006278 1.0e-19 100.1 65 78.5
RhsimUnG0046700 Rhododendron simsii HOM05D005186 ORTHO05D006278 1.0e-19 100.1 67 80.6
SGA_v2.0_scaffold543G52822 Striga asiatica HOM05D005186 ORTHO05D006278 1.0e-19 100.1 65 81.5
Atru.chr1.716 Acer truncatum HOM05D005186 ORTHO05D006278 1.3e-19 99.8 63 76.2
Cc02_g04200 Coffea canephora HOM05D005186 ORTHO05D006278 1.7e-19 99.4 68 75.0
Hma1.2p1_0432F.1_g151690 Hydrangea macrophylla HOM05D005186 ORTHO05D006278 1.7e-19 99.4 68 72.1
Lj3g0017931 Lotus japonicus HOM05D005186 ORTHO05D006278 1.7e-19 99.4 62 83.9
Ah.07g207900 Amaranthus hybridus HOM05D005186 ORTHO05D006278 2.3e-19 99.0 66 78.8
Ca_25005_v3 Cicer arietinum L. HOM05D005186 ORTHO05D006278 2.3e-19 99.0 62 82.3
Migut.F00469 Erythranthe guttata HOM05D005186 ORTHO05D006278 2.3e-19 99.0 68 72.1
Cpa.g.sc3.315 Carica papaya HOM05D005186 ORTHO05D006278 3.0e-19 98.6 67 80.6
Medtr4g036110 Medicago truncatula HOM05D005186 ORTHO05D006278 3.0e-19 98.6 62 82.3
Nitab4.5_0003875g0030 Nicotiana tabacum HOM05D005186 ORTHO05D006278 3.0e-19 98.6 67 73.1
Oeu042561.2 Olea europaea HOM05D005186 ORTHO05D006278 3.0e-19 98.6 67 76.1
TPR.G3671 Trifolium pratense HOM05D005186 ORTHO05D006278 3.0e-19 98.6 62 82.3
Gohir.A03G058600 Gossypium hirsutum HOM05D005186 ORTHO05D006278 3.9e-19 98.2 64 79.7
Nitab4.5_0001383g0010 Nicotiana tabacum HOM05D005186 ORTHO05D006278 3.9e-19 98.2 67 73.1
PGR142G0385 Punica granatum HOM05D005186 ORTHO05D006278 5.1e-19 97.8 66 72.7
AT5G62390 Arabidopsis thaliana HOM05D005186 ORTHO05D006278 6.6e-19 97.4 65 78.5
COL.COLO4_14129 Corchorus olitorius HOM05D005186 ORTHO05D006278 6.6e-19 97.4 62 82.3
Gohir.D03G107500 Gossypium hirsutum HOM05D005186 ORTHO05D006278 6.6e-19 97.4 60 83.3
Gorai.003G113800 Gossypium raimondii HOM05D005186 ORTHO05D006278 6.6e-19 97.4 60 83.3
Phvul.011G006100 Phaseolus vulgaris HOM05D005186 ORTHO05D006278 6.6e-19 97.4 64 79.7
Hund11823 Selenicereus undatus HOM05D005186 ORTHO05D006278 6.6e-19 97.4 66 77.3
TWI23G1038 Tripterygium wilfordii HOM05D005186 ORTHO05D006278 6.6e-19 97.4 65 76.9
VMungo1127G0816 Vigna mungo HOM05D005186 ORTHO05D006278 6.6e-19 97.4 64 79.7
AL8G39220 Arabidopsis lyrata HOM05D005186 ORTHO05D006278 8.7e-19 97.1 65 78.5
Carub.0008s2307 Capsella rubella HOM05D005186 ORTHO05D006278 8.7e-19 97.1 65 78.5
Glyma.12G005300 Glycine max HOM05D005186 ORTHO05D006278 8.7e-19 97.1 65 78.5
Nn1g01074 Nelumbo nucifera HOM05D005186 ORTHO05D006278 8.7e-19 97.1 69 76.8
SGA_v2.0_scaffold2G01194 Striga asiatica HOM05D005186 ORTHO05D006278 8.7e-19 97.1 65 76.9
Aa31LG11G1230 Aethionema arabicum HOM05D005186 ORTHO05D006278 1.1e-18 96.7 65 76.9
AUR62002195 Chenopodium quinoa HOM05D005186 ORTHO05D006278 1.1e-18 96.7 66 77.3
AUR62015515 Chenopodium quinoa HOM05D005186 ORTHO05D006278 1.1e-18 96.7 66 77.3
TWI39G1272 Tripterygium wilfordii HOM05D005186 ORTHO05D006278 1.1e-18 96.7 65 76.9
ECA238G0955 Erigeron canadensis HOM05D005186 ORTHO05D006278 1.5e-18 96.3 67 74.6
Glyma.09G231200 Glycine max HOM05D005186 ORTHO05D006278 1.5e-18 96.3 64 78.1
Sc13g0007880 Simmondsia chinensis HOM05D005186 ORTHO05D006278 1.5e-18 96.3 66 77.3
Aqoxy7G00728 Aquilegia oxysepala HOM05D005186 ORTHO05D006278 1.9e-18 95.9 71 67.6
CARHR276170 Cardamine hirsuta HOM05D005186 ORTHO05D006278 1.9e-18 95.9 65 76.9
Solyc03g083970.3 Solanum lycopersicum HOM05D005186 ORTHO05D006278 1.9e-18 95.9 67 71.6
Sopen03g023730 Solanum pennellii HOM05D005186 ORTHO05D006278 1.9e-18 95.9 67 71.6
PGSC0003DMG400013858 Solanum tuberosum HOM05D005186 ORTHO05D006278 1.9e-18 95.9 67 71.6
Manes.14G035500 Manihot esculenta HOM05D005186 ORTHO05D006278 2.5e-18 95.5 65 76.9
HanXRQChr14g0461411 Helianthus annuus HOM05D005186 ORTHO05D006278 3.3e-18 95.1 67 73.1
TAR375G0993 Trochodendron aralioides HOM05D005186 ORTHO05D006278 3.3e-18 95.1 79 65.8
PSO017G1100 Papaver somniferum HOM05D005186 ORTHO05D006278 4.3e-18 94.7 65 73.8
PSO170G0780 Papaver somniferum HOM05D005186 ORTHO05D006278 4.3e-18 94.7 65 73.8
Thhalv10004201m.g Eutrema salsugineum HOM05D005186 ORTHO05D006278 5.6e-18 94.4 65 75.4
EL10Ac3g05838 Beta vulgaris HOM05D005186 ORTHO05D006278 7.3e-18 94.0 67 74.6
Sp2g25560 Schrenkiella parvula HOM05D005186 ORTHO05D006278 7.3e-18 94.0 65 75.4
Lalb_Chr19g0140361 Lupinus albus HOM05D005186 ORTHO05D006278 9.6e-18 93.6 62 77.4
Hma1.2p1_1640F.1_g295100 Hydrangea macrophylla HOM05D005186 ORTHO05D006278 1.6e-17 92.8 67 76.1
Psat7g207000 Pisum sativum HOM05D005186 ORTHO05D006278 1.6e-17 92.8 62 77.4
GSVIVG01018630001 Vitis vinifera HOM05D005186 ORTHO05D006278 1.6e-17 92.8 68 70.6
Dinv22950 Davidia involucrata HOM05D005186 ORTHO05D006278 2.1e-17 92.4 62 75.8
CAN.G48.15 Capsicum annuum HOM05D005186 ORTHO05D006278 2.8e-17 92.0 67 68.7
unitig_1.g29355 Utricularia gibba HOM05D005186 ORTHO05D006278 3.6e-17 91.7 65 73.8
unitig_747.g22057 Utricularia gibba HOM05D005186 ORTHO05D006278 3.6e-17 91.7 65 73.8
Lalb_Chr01g0000291 Lupinus albus HOM05D005186 ORTHO05D006278 4.8e-17 91.3 62 75.8
MSTRG.128 Avicennia marina HOM05D005186 ORTHO05D006278 8.1e-17 90.5 65 70.8
arahy.Tifrunner.gnm1.ann1.UNN1LQ Arachis hypogaea HOM05D005186 ORTHO05D006278 1.8e-16 89.4 61 77.0
BcaNung02779 Brassica carinata HOM05D005186 ORTHO05D006278 1.8e-16 89.4 66 74.2
ClCG09G015150 Citrullus lanatus HOM05D005186 ORTHO05D006278 1.8e-16 89.4 62 74.2
arahy.Tifrunner.gnm1.ann1.7NC073 Arachis hypogaea HOM05D005186 ORTHO05D006278 2.4e-16 89.0 61 77.0
Lj8A42G21 Lonicera japonica HOM05D005186 ORTHO05D006278 3.1e-16 88.6 70 72.9
BcaC01g02462 Brassica carinata HOM05D005186 ORTHO05D006278 5.3e-16 87.8 66 72.7
BcaC01g02463 Brassica carinata HOM05D005186 ORTHO05D006278 5.3e-16 87.8 66 72.7
A01p12890 Brassica napus HOM05D005186 ORTHO05D006278 5.3e-16 87.8 66 72.7
C03p64500 Brassica napus HOM05D005186 ORTHO05D006278 5.3e-16 87.8 66 72.7
BolC3t18705H Brassica oleracea HOM05D005186 ORTHO05D006278 5.3e-16 87.8 66 72.7
BraA01t01233Z Brassica rapa HOM05D005186 ORTHO05D006278 5.3e-16 87.8 66 72.7
CsaV3_7G006320 Cucumis sativus L. HOM05D005186 ORTHO05D006278 6.9e-16 87.4 62 72.6
Sed0012571 Sechium edule HOM05D005186 ORTHO05D006278 6.9e-16 87.4 62 71.0
Migut.F01178 Erythranthe guttata HOM05D005186 ORTHO05D006278 9.0e-16 87.0 68 69.1
C01p15530 Brassica napus HOM05D005186 ORTHO05D006278 1.2e-15 86.7 66 71.2
BolC1t01505H Brassica oleracea HOM05D005186 ORTHO05D006278 1.2e-15 86.7 66 71.2
ECA238G1972 Erigeron canadensis HOM05D005186 ORTHO05D006278 1.5e-15 86.3 63 74.6
MELO3C018660.2 Cucumis melo HOM05D005186 ORTHO05D006278 2.0e-15 85.9 62 71.0
MBI04_g37589_MAGBIO Magnolia biondii HOM05D005186 ORTHO05D006278 2.0e-15 85.9 69 66.7
Nn6g34030 Nelumbo nucifera HOM05D005186 ORTHO05D006278 2.0e-15 85.9 71 64.8
THA.LOC104821410 Tarenaya hassleriana HOM05D005186 ORTHO05D006278 4.4e-15 84.7 63 68.3
PGR042G0730 Punica granatum HOM05D005186 ORTHO05D006278 7.6e-15 84.0 66 63.6
TAR374G0329 Trochodendron aralioides HOM05D005186 ORTHO05D006278 7.6e-15 84.0 68 64.7
Sed0005126 Sechium edule HOM05D005186 ORTHO05D006278 9.9e-15 83.6 60 73.3
ATR1153G063 Amborella trichopoda HOM05D005186 ORTHO05D006278 1.3e-11 73.2 62 66.1
HPP92_022436 Vanilla planifolia HOM05D005186 ORTHO05D006278 3.9e-11 71.6 66 57.6
Zm00001eb379410 Zea mays HOM05D005186 ORTHO05D006278 5.1e-11 71.2 65 56.9
Nn3g18746 Nelumbo nucifera HOM05D005186 ORTHO05D006278 6.6e-11 70.9 60 63.3
Os06g0104400 Oryza sativa ssp. japonica HOM05D005186 ORTHO05D006278 6.6e-11 70.9 65 56.9
Sabra14G0043300 Salix brachista HOM05D005186 ORTHO05D006278 1.9e-10 69.3 58 65.5
FAN03G1572 Fragaria x ananassa HOM05D005186 ORTHO05D006278 2.5e-10 68.9 47 76.6
Zm00001eb229450 Zea mays HOM05D005186 ORTHO05D006278 1.6e-09 66.2 53 62.3
Atru.chr5.265 Acer truncatum HOM05D005186 ORTHO05D006278 3.6e-09 65.1 61 62.3
HanXRQChr05g0146091 Helianthus annuus HOM05D005186 ORTHO05D006278 3.6e-09 65.1 60 56.7
CiPaw.04G060200 Carya illinoinensis HOM05D005186 ORTHO05D006278 1.8e-08 62.8 63 58.7
CDE11G1075 Ceratophyllum demersum HOM05D005186 ORTHO05D006278 1.8e-08 62.8 69 52.2
Hund04601 Selenicereus undatus HOM05D005186 ORTHO05D006278 3.1e-08 62.0 61 55.7
Atru.chr1.1456 Acer truncatum HOM05D005186 ORTHO05D006278 6.9e-08 60.8 62 56.5
CDE02G0091 Ceratophyllum demersum HOM05D005186 ORTHO05D006278 1.5e-07 59.7 71 49.3
COL.COLO4_12507 Corchorus olitorius HOM05D005186 ORTHO05D006278 6.4e-06 54.3 31 80.6
SHI13968 Sapria himalayana HOM05D005186 ORTHO05D006278 8.4e-06 53.9 62 50.0


User provided reference genes

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