Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 1.3e-255 885.9 456 100.0
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 1.7e-255 885.6 456 99.8
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 7.5e-232 807.0 461 91.5
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 3.9e-228 794.7 456 90.4
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 4.7e-226 787.7 458 90.0
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 5.8e-224 780.8 474 85.2
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 1.3e-223 779.6 455 85.5
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 1.3e-223 779.6 474 83.8
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 3.7e-223 778.1 456 86.0
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 4.9e-223 777.7 456 88.6
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 1.9e-222 775.8 457 85.1
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 5.4e-222 774.2 457 86.0
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 2.0e-221 772.3 457 85.8
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 2.3e-220 768.8 456 83.8
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 1.5e-219 766.1 457 84.2
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 4.3e-219 764.6 456 84.2
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 4.3e-219 764.6 457 84.0
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 9.5e-219 763.5 456 84.2
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 1.2e-218 763.1 456 86.6
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 1.2e-218 763.1 463 85.3
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 2.1e-218 762.3 456 84.2
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 8.1e-218 760.4 456 83.6
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 1.1e-217 760.0 458 83.2
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 2.3e-217 758.8 463 83.6
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 4.4e-216 754.6 472 80.9
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 7.5e-216 753.8 458 85.6
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 2.2e-215 752.3 456 83.1
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 4.9e-215 751.1 460 82.0
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 1.9e-214 749.2 457 83.8
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 7.1e-214 747.3 453 82.3
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 2.1e-213 745.7 474 83.1
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 2.1e-213 745.7 455 82.9
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 4.6e-213 744.6 456 82.7
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 1.3e-212 743.0 456 81.8
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 8.6e-212 740.3 459 82.6
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 8.6e-212 740.3 456 81.6
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 8.6e-212 740.3 456 82.0
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 1.5e-211 739.6 456 81.8
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 2.5e-211 738.8 457 82.9
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 2.5e-211 738.8 454 82.4
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 3.3e-211 738.4 461 81.3
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 4.3e-211 738.0 456 82.2
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 5.6e-211 737.6 456 80.3
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 5.6e-211 737.6 457 82.5
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 1.2e-210 736.5 457 82.9
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 1.2e-210 736.5 458 81.2
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 2.1e-210 735.7 461 80.9
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 3.6e-210 734.9 458 81.2
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 3.6e-210 734.9 455 81.5
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 8.1e-210 733.8 457 81.0
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 1.1e-209 733.4 459 81.3
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 1.8e-209 732.6 459 81.9
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 1.8e-209 732.6 522 76.2
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 4.0e-209 731.5 457 81.8
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 5.2e-209 731.1 462 83.5
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 5.8e-208 727.6 462 83.3
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 1.7e-207 726.1 458 80.6
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 2.2e-207 725.7 451 82.0
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 1.9e-206 722.6 433 83.4
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 7.1e-206 720.7 457 82.1
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 9.2e-206 720.3 433 82.9
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 2.1e-205 719.2 459 78.9
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 4.6e-205 718.0 458 79.0
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 4.6e-205 718.0 454 79.5
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 7.8e-205 717.2 432 81.9
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 1.7e-204 716.1 431 82.6
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 2.5e-203 712.2 458 78.8
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 2.1e-202 709.1 454 79.3
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 2.1e-202 709.1 443 81.0
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 2.8e-202 708.8 457 78.3
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 2.4e-201 705.7 455 79.1
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 2.4e-201 705.7 455 79.1
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 3.4e-200 701.8 457 77.5
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 5.8e-200 701.0 457 78.8
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 1.3e-199 699.9 457 78.6
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 2.9e-199 698.7 457 79.6
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 3.5e-197 691.8 458 79.0
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 6.0e-197 691.0 454 82.2
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 3.0e-196 688.7 454 75.8
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 3.0e-196 688.7 382 88.7
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 5.1e-196 688.0 469 79.5
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 6.6e-196 687.6 464 77.4
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 9.6e-195 683.7 362 92.3
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.4e-193 679.9 457 77.0
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 9.0e-193 677.2 457 77.5
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 3.4e-192 675.2 387 84.5
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 2.7e-189 665.6 357 91.9
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 5.8e-184 647.9 455 74.1
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 1.4e-182 643.3 358 87.2
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 1.6e-178 629.8 380 80.3
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 4.8e-178 628.2 332 93.1
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 9.7e-171 604.0 332 88.9
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 6.7e-164 581.3 453 69.5
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 8.7e-164 580.9 418 78.0
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 2.8e-162 575.9 382 71.7
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 6.3e-162 574.7 384 72.4
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 1.1e-161 573.9 356 82.0
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 1.2e-160 570.5 383 73.1
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 5.0e-159 565.1 360 80.3
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 1.3e-154 550.4 381 69.8
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 2.1e-149 533.1 283 91.9
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 2.0e-144 516.5 279 90.3
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 2.5e-142 509.6 315 85.7
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 9.7e-139 497.7 315 79.0
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 8.2e-138 494.6 405 62.5
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 4.7e-133 478.8 432 62.3
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 8.0e-133 478.0 321 75.4
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.3e-127 460.7 236 94.1
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.3e-127 460.7 236 94.1
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 1.7e-127 460.3 332 72.6
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.9e-126 456.8 418 60.0
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 5.0e-111 405.6 412 49.3
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 8.6e-95 351.7 242 77.3
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 1.1e-76 291.6 318 47.2
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 1.8e-63 247.7 337 43.0
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 6.9e-60 235.7 402 37.1
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 9.0e-52 208.8 395 35.9
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 2.0e-51 207.6 341 36.7
CDE07G0145 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 5.0e-50 203.0 117 84.6
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 1.1e-49 201.8 349 35.2
TPR.G22619 Trifolium pratense HOM05D005960 ORTHO05D007537 1.6e-48 198.0 151 68.2
Cc07_g03900 Coffea canephora HOM05D005960 ORTHO05D007537 1.1e-46 191.8 102 89.2
Potri.004G125301 Populus trichocarpa HOM05D005960 ORTHO05D007537 1.8e-44 184.5 152 71.7
AUR62018149 Chenopodium quinoa HOM05D005960 ORTHO05D007537 1.5e-43 181.4 100 89.0
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 2.0e-43 181.0 362 31.8
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 7.4e-38 162.5 92 90.2
Oeu061493.1 Olea europaea HOM05D005960 ORTHO05D007537 8.3e-21 105.9 51 88.2
MD09G1061200 Malus domestica HOM05D005960 ORTHO05D007537 1.2e-16 92.0 92 55.4
PGSC0003DMG400033541 Solanum tuberosum HOM05D005960 ORTHO05D007537 1.4e-15 88.6 63 77.8
Zm00001eb030310 Zea mays HOM05D005960 ORTHO05D051632 7.2e-09 66.2 38 86.8
Zm00001eb250570 Zea mays HOM05D005960 ORTHO05D051632 1.6e-08 65.1 42 78.6
MCO08G023 Micromonas commoda HOM05D005960 ORTHO05D270145 6.1e-08 63.2 150 28.7


User provided reference genes

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