Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003728 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 6.6e-43 176.8 79 100.0
CSS0018510 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 1.9e-21 105.5 50 98.0
Cfa016460 Carpinus fangiana HOM05D008196 ORTHO05D010261 1.7e-14 82.4 50 70.0
QL07p041763 Quercus lobata HOM05D008196 ORTHO05D010261 2.2e-14 82.0 50 70.0
Haze_19461 Corylus avellana HOM05D008196 ORTHO05D010261 8.4e-14 80.1 50 68.0
Dinv35820 Davidia involucrata HOM05D008196 ORTHO05D010261 5.4e-13 77.4 50 66.0
RhsimUnG0004600 Rhododendron simsii HOM05D008196 ORTHO05D010261 6.7e-11 70.5 50 72.0
RhsimUnG0068000 Rhododendron simsii HOM05D008196 ORTHO05D010261 6.7e-11 70.5 50 72.0
GSVIVG01033695001 Vitis vinifera HOM05D008196 ORTHO05D010261 3.3e-10 68.2 50 58.0
vmacro08799 Vaccinium macrocarpon HOM05D008196 ORTHO05D010261 5.6e-10 67.4 46 67.4
TAR636G2455 Trochodendron aralioides HOM05D008196 ORTHO05D010261 7.4e-10 67.0 50 56.0
Atru.chr8.1725_Atru.chr8.1735 Acer truncatum HOM05D008196 ORTHO05D010261 1.3e-09 66.2 50 58.0
Hma1.2p1_0547F.1_g176400 Hydrangea macrophylla HOM05D008196 ORTHO05D010261 4.8e-09 64.3 50 58.0
TWI74G1102 Tripterygium wilfordii HOM05D008196 ORTHO05D010261 4.8e-09 64.3 50 52.0
Lalb_Chr21g0315171 Lupinus albus HOM05D008196 ORTHO05D010261 6.2e-09 63.9 50 50.0
Nn6g35204 Nelumbo nucifera HOM05D008196 ORTHO05D010261 6.2e-09 63.9 52 53.8
Actinidia31311 Actinidia chinensis HOM05D008196 ORTHO05D010261 3.4e-07 58.2 46 65.2
Ca_08867_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 4.5e-07 57.8 40 52.5
Ca_08927_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 4.5e-07 57.8 40 52.5
Thecc.05G073000 Theobroma cacao HOM05D008196 ORTHO05D010261 4.5e-07 57.8 31 71.0
Medtr7g102410 Medicago truncatula HOM05D008196 ORTHO05D010261 7.6e-07 57.0 36 55.6
Phvul.001G181700 Phaseolus vulgaris HOM05D008196 ORTHO05D010261 7.6e-07 57.0 45 53.3
Duzib106G1531 Durio zibethinus HOM05D008196 ORTHO05D010261 9.9e-07 56.6 31 71.0
Gohir.A04G069600 Gossypium hirsutum HOM05D008196 ORTHO05D010261 9.9e-07 56.6 50 52.0
TPR.G8704 Trifolium pratense HOM05D008196 ORTHO05D010261 9.9e-07 56.6 40 47.5
HanXRQChr13g0400671 Helianthus annuus HOM05D008196 ORTHO05D010261 2.2e-06 55.5 51 49.0
CiPaw.10G001900 Carya illinoinensis HOM05D008196 ORTHO05D010261 2.9e-06 55.1 39 59.0
arahy.Tifrunner.gnm1.ann1.PXX6WP Arachis hypogaea HOM05D008196 ORTHO05D010261 4.9e-06 54.3 35 48.6
Gohir.D04G108000 Gossypium hirsutum HOM05D008196 ORTHO05D010261 4.9e-06 54.3 31 64.5
Gorai.009G412100 Gossypium raimondii HOM05D008196 ORTHO05D010261 4.9e-06 54.3 31 64.5
arahy.Tifrunner.gnm1.ann1.A0NJYH Arachis hypogaea HOM05D008196 ORTHO05D010261 6.4e-06 53.9 34 50.0
Lj1g0021041 Lotus japonicus HOM05D008196 ORTHO05D010261 6.4e-06 53.9 42 50.0
Psat3g040360 Pisum sativum HOM05D008196 ORTHO05D010261 8.4e-06 53.5 52 40.4
VMungo1383G2144 Vigna mungo HOM05D008196 ORTHO05D010261 8.4e-06 53.5 42 50.0


User provided reference genes

Program Settings