Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003707 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 2.6e-43 178.3 91 100.0
CSS0003918 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 9.9e-43 176.4 91 98.9
Hma1.2p1_0550F.1_g177300 Hydrangea macrophylla HOM05D007149 ORTHO05D008956 9.6e-38 159.8 89 87.6
Nn4g23775 Nelumbo nucifera HOM05D007149 ORTHO05D008956 1.3e-37 159.5 89 85.4
Actinidia36312 Actinidia chinensis HOM05D007149 ORTHO05D008956 4.8e-37 157.5 87 87.4
Manes.01G108800 Manihot esculenta HOM05D007149 ORTHO05D008956 4.8e-37 157.5 89 84.3
Actinidia15873 Actinidia chinensis HOM05D007149 ORTHO05D008956 6.2e-37 157.1 88 85.2
Solyc02g063085.1 Solanum lycopersicum HOM05D007149 ORTHO05D008956 6.2e-37 157.1 89 85.4
Cfa007939 Carpinus fangiana HOM05D007149 ORTHO05D008956 8.1e-37 156.8 89 84.3
Gohir.A07G071500 Gossypium hirsutum HOM05D007149 ORTHO05D008956 8.1e-37 156.8 89 84.3
Gorai.001G080200 Gossypium raimondii HOM05D007149 ORTHO05D008956 8.1e-37 156.8 89 84.3
Dinv34841 Davidia involucrata HOM05D007149 ORTHO05D008956 1.1e-36 156.4 86 89.5
Thecc.04G136400 Theobroma cacao HOM05D007149 ORTHO05D008956 2.4e-36 155.2 89 83.1
vmacro05569 Vaccinium macrocarpon HOM05D007149 ORTHO05D008956 2.4e-36 155.2 88 85.2
Gohir.D07G076000 Gossypium hirsutum HOM05D007149 ORTHO05D008956 4.0e-36 154.5 88 84.1
Peaxi162Scf00501g00121 Petunia axillaris HOM05D007149 ORTHO05D008956 4.0e-36 154.5 89 84.3
COL.COLO4_16183 Corchorus olitorius HOM05D007149 ORTHO05D008956 5.3e-36 154.1 89 82.0
Ah.10g037580 Amaranthus hybridus HOM05D007149 ORTHO05D008956 6.9e-36 153.7 88 85.2
Ca_13737_v3 Cicer arietinum L. HOM05D007149 ORTHO05D008956 6.9e-36 153.7 89 84.3
CAN.G953.15 Capsicum annuum HOM05D007149 ORTHO05D008956 9.0e-36 153.3 89 83.1
CiPaw.04G040600 Carya illinoinensis HOM05D007149 ORTHO05D008956 9.0e-36 153.3 89 83.1
Cc07_g08920 Coffea canephora HOM05D007149 ORTHO05D008956 9.0e-36 153.3 88 85.2
Hund13727 Selenicereus undatus HOM05D007149 ORTHO05D008956 9.0e-36 153.3 88 84.1
Sabra17G0093700 Salix brachista HOM05D007149 ORTHO05D008956 1.2e-35 152.9 89 80.9
Cpa.g.sc179.16 Carica papaya HOM05D007149 ORTHO05D008956 2.0e-35 152.1 88 83.0
Aa31LG11G13550 Aethionema arabicum HOM05D007149 ORTHO05D008956 3.4e-35 151.4 87 83.9
HPP92_011090 Vanilla planifolia HOM05D007149 ORTHO05D008956 3.4e-35 151.4 89 82.0
Phvul.004G064400 Phaseolus vulgaris HOM05D007149 ORTHO05D008956 4.5e-35 151.0 87 83.9
TWI74G0718 Tripterygium wilfordii HOM05D007149 ORTHO05D008956 4.5e-35 151.0 89 79.8
Ciclev10013207m.g Citrus clementina HOM05D007149 ORTHO05D008956 7.6e-35 150.2 86 83.7
CANSAT64G1005 Cannabis sativa HOM05D007149 ORTHO05D008956 9.9e-35 149.8 88 81.8
Migut.H00206 Erythranthe guttata HOM05D007149 ORTHO05D008956 9.9e-35 149.8 89 82.0
THA.LOC104803005 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 9.9e-35 149.8 88 84.1
CDE11G0018 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 1.7e-34 149.1 86 82.6
THA.LOC104827153 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 1.7e-34 149.1 86 84.9
CiPaw.03G060400 Carya illinoinensis HOM05D007149 ORTHO05D008956 2.2e-34 148.7 89 80.9
ATR0665G039 Amborella trichopoda HOM05D007149 ORTHO05D008956 2.9e-34 148.3 88 81.8
HanXRQChr12g0376461 Helianthus annuus HOM05D007149 ORTHO05D008956 2.9e-34 148.3 88 83.0
Lj2g0020616 Lotus japonicus HOM05D007149 ORTHO05D008956 2.9e-34 148.3 89 82.0
Eucgr.J01478 Eucalyptus grandis HOM05D007149 ORTHO05D008956 3.8e-34 147.9 89 80.9
QL02p051591 Quercus lobata HOM05D007149 ORTHO05D008956 3.8e-34 147.9 86 83.7
Aqoxy3G03934 Aquilegia oxysepala HOM05D007149 ORTHO05D008956 4.9e-34 147.5 89 80.9
Glyma.19G046200 Glycine max HOM05D007149 ORTHO05D008956 6.4e-34 147.1 85 83.5
Lalb_Chr04g0257361 Lupinus albus HOM05D007149 ORTHO05D008956 6.4e-34 147.1 89 79.8
Sp6g28070 Schrenkiella parvula HOM05D007149 ORTHO05D008956 6.4e-34 147.1 85 84.7
Potri.017G113401 Populus trichocarpa HOM05D007149 ORTHO05D008956 8.4e-34 146.7 89 77.5
Atru.chr8.867 Acer truncatum HOM05D007149 ORTHO05D008956 1.1e-33 146.4 86 83.7
EL10Ac2g04594 Beta vulgaris HOM05D007149 ORTHO05D008956 1.1e-33 146.4 86 82.6
CARHR197250 Cardamine hirsuta HOM05D007149 ORTHO05D008956 1.4e-33 146.0 87 81.6
FvH4_6g45250 Fragaria vesca HOM05D007149 ORTHO05D008956 1.4e-33 146.0 89 75.3
FAN09G4869 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.4e-33 146.0 89 75.3
FAN14G5255 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.4e-33 146.0 89 75.3
BcaC04g18912 Brassica carinata HOM05D007149 ORTHO05D008956 1.9e-33 145.6 85 83.5
A10p23000 Brassica napus HOM05D007149 ORTHO05D008956 1.9e-33 145.6 85 83.5
C09p60970 Brassica napus HOM05D007149 ORTHO05D008956 1.9e-33 145.6 85 83.5
BolC9t58944H Brassica oleracea HOM05D007149 ORTHO05D008956 1.9e-33 145.6 85 83.5
BraA10t44369Z Brassica rapa HOM05D007149 ORTHO05D008956 1.9e-33 145.6 85 83.5
PGR004G0481 Punica granatum HOM05D007149 ORTHO05D008956 1.9e-33 145.6 87 81.6
Sc11g0008240 Simmondsia chinensis HOM05D007149 ORTHO05D008956 1.9e-33 145.6 88 80.7
unitig_899.g14509 Utricularia gibba HOM05D007149 ORTHO05D008956 1.9e-33 145.6 88 81.8
AL6G26940 Arabidopsis lyrata HOM05D007149 ORTHO05D008956 2.4e-33 145.2 85 83.5
DCAR_017207 Daucus carota HOM05D007149 ORTHO05D008956 2.4e-33 145.2 89 78.7
Thhalv10015129m.g Eutrema salsugineum HOM05D007149 ORTHO05D008956 2.4e-33 145.2 85 83.5
Os03g0257900 Oryza sativa ssp. japonica HOM05D007149 ORTHO05D008956 3.2e-33 144.8 88 79.5
BcaB08g36883 Brassica carinata HOM05D007149 ORTHO05D008956 4.2e-33 144.4 85 83.5
Lsat_1_v5_gn_3_78860 Lactuca sativa HOM05D007149 ORTHO05D008956 4.2e-33 144.4 88 79.5
Zm00001eb011230 Zea mays HOM05D007149 ORTHO05D008956 5.5e-33 144.1 88 77.3
RcHm_v2.0_Chr2g0162971 Rosa chinensis HOM05D007149 ORTHO05D008956 1.6e-32 142.5 88 73.9
Carub.0006s1425 Capsella rubella HOM05D007149 ORTHO05D008956 2.1e-32 142.1 85 81.2
GSVIVG01031069001 Vitis vinifera HOM05D007149 ORTHO05D008956 2.1e-32 142.1 89 74.2
Medtr0024s0060 Medicago truncatula HOM05D007149 ORTHO05D008956 2.7e-32 141.7 83 84.3
PSO782G5258 Papaver somniferum HOM05D007149 ORTHO05D008956 2.7e-32 141.7 86 80.2
Psat1g079040 Pisum sativum HOM05D007149 ORTHO05D008956 3.5e-32 141.4 85 81.2
AT5G16060 Arabidopsis thaliana HOM05D007149 ORTHO05D008956 6.0e-32 140.6 85 80.0
CsaV3_5G039180 Cucumis sativus L. HOM05D007149 ORTHO05D008956 7.9e-32 140.2 86 77.9
PSO063G3907 Papaver somniferum HOM05D007149 ORTHO05D008956 2.3e-31 138.7 86 79.1
MELO3C022093.2 Cucumis melo HOM05D007149 ORTHO05D008956 3.0e-31 138.3 86 77.9
FAN09G3419 Fragaria x ananassa HOM05D007149 ORTHO05D008956 5.1e-31 137.5 100 67.0
MD17G1105000 Malus domestica HOM05D007149 ORTHO05D008956 8.7e-31 136.7 88 72.7
Sed0025185 Sechium edule HOM05D007149 ORTHO05D008956 1.9e-30 135.6 85 77.6
MD07G1095900 Malus domestica HOM05D007149 ORTHO05D008956 2.5e-30 135.2 86 74.4
Duzib133G0440 Durio zibethinus HOM05D007149 ORTHO05D008956 7.4e-30 133.7 126 57.1
FAN02G3200 Fragaria x ananassa HOM05D007149 ORTHO05D008956 2.1e-29 132.1 101 63.4
PGSC0003DMG400024179 Solanum tuberosum HOM05D007149 ORTHO05D008956 3.7e-29 131.3 73 84.9
Nn3g17784 Nelumbo nucifera HOM05D007149 ORTHO05D008956 8.2e-29 130.2 90 72.2
Haze_14138 Corylus avellana HOM05D007149 ORTHO05D008956 4.0e-28 127.9 69 88.4
Nitab4.5_0001569g0020 Nicotiana tabacum HOM05D007149 ORTHO05D008956 5.8e-27 124.0 67 88.1
TPR.G32450 Trifolium pratense HOM05D007149 ORTHO05D008956 2.9e-26 121.7 140 52.9
arahy.Tifrunner.gnm1.ann1.2T9F1Z Arachis hypogaea HOM05D007149 ORTHO05D008956 3.8e-26 121.3 72 79.2
arahy.Tifrunner.gnm1.ann1.HVR4ZG Arachis hypogaea HOM05D007149 ORTHO05D008956 3.8e-26 121.3 72 79.2
Aa31LG2G17140 Aethionema arabicum HOM05D007149 ORTHO05D008956 4.9e-26 120.9 70 80.0
CDE05G2183 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 4.9e-26 120.9 67 86.6
SalBow3G3356 Salvia bowleyana HOM05D007149 ORTHO05D008956 6.5e-26 120.6 68 85.3
Sopen02g014160 Solanum pennellii HOM05D007149 ORTHO05D008956 8.4e-26 120.2 66 83.3
SalBow6G3599 Salvia bowleyana HOM05D007149 ORTHO05D008956 1.2e-24 116.3 66 81.8
HPP92_011107 Vanilla planifolia HOM05D007149 ORTHO05D008956 2.1e-24 115.5 71 77.5
AagrBONN_evm.TU.Sc2ySwM_228.1220 Anthoceros agrestis HOM05D007149 ORTHO05D008956 3.0e-23 111.7 79 64.6
AUR62014527 Chenopodium quinoa HOM05D007149 ORTHO05D008956 3.0e-23 111.7 65 80.0
ClCG11G005400 Citrullus lanatus HOM05D007149 ORTHO05D008956 3.9e-23 111.3 66 81.8
SHI30170 Sapria himalayana HOM05D007149 ORTHO05D008956 5.1e-23 110.9 67 76.1
Carub.0055s0008 Capsella rubella HOM05D007149 ORTHO05D008956 8.7e-23 110.2 66 80.3
ECA246G4376 Erigeron canadensis HOM05D007149 ORTHO05D008956 1.5e-22 109.4 65 78.5
Prupe.3G238900 Prunus persica HOM05D007149 ORTHO05D008956 3.1e-20 101.7 63 71.4
Pp3c20_17910 Physcomitrium patens HOM05D007149 ORTHO05D008956 6.9e-20 100.5 81 60.5
SMO356G0237 Selaginella moellendorffii HOM05D007149 ORTHO05D008956 9.0e-20 100.1 81 60.5
Mapoly0073s0075 Marchantia polymorpha HOM05D007149 ORTHO05D008956 1.8e-15 85.9 63 60.3
SGA_v2.0_scaffold33G13472 Striga asiatica HOM05D007149 ORTHO05D008956 2.3e-15 85.5 45 82.2
Nitab4.5_0002288g0070 Nicotiana tabacum HOM05D007149 ORTHO05D008956 1.9e-14 82.4 89 55.1
RcHm_v2.0_Chr2g0163021 Rosa chinensis HOM05D007149 ORTHO05D008956 5.7e-14 80.9 67 61.2
PRCOL_00003753 Prasinoderma coloniale HOM05D007149 ORTHO05D008956 1.7e-10 69.3 79 45.6
MCO15G246 Micromonas commoda HOM05D007149 ORTHO05D008956 2.2e-10 68.9 71 45.1


User provided reference genes

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