Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003695 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 6.6e-285 983.4 518 100.0
CSS0008326 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 1.6e-270 935.6 539 93.7
Rhsim06G0202700 Rhododendron simsii HOM05D005607 ORTHO05D008142 1.4e-221 773.1 554 76.4
vmacro11890 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 2.3e-216 755.7 563 73.4
vmacro23190 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 8.6e-216 753.8 563 73.2
Actinidia31524 Actinidia chinensis HOM05D005607 ORTHO05D008142 3.5e-209 731.9 539 74.6
Dinv20204 Davidia involucrata HOM05D005607 ORTHO05D008142 4.0e-205 718.4 539 72.9
GSVIVG01014288001 Vitis vinifera HOM05D005607 ORTHO05D008142 3.3e-199 698.7 537 69.8
TWI38G0301 Tripterygium wilfordii HOM05D005607 ORTHO05D008142 2.1e-193 679.5 539 67.5
Thecc.07G096400 Theobroma cacao HOM05D005607 ORTHO05D008142 3.3e-191 672.2 539 68.1
Cfa020607 Carpinus fangiana HOM05D005607 ORTHO05D008142 1.1e-189 667.2 539 67.9
CiPaw.11G167700 Carya illinoinensis HOM05D005607 ORTHO05D008142 2.6e-188 662.5 539 66.8
COL.COLO4_36717 Corchorus olitorius HOM05D005607 ORTHO05D008142 2.2e-187 659.4 539 66.6
Cc05_g11730 Coffea canephora HOM05D005607 ORTHO05D008142 1.1e-186 657.1 539 67.2
Manes.03G105800 Manihot esculenta HOM05D005607 ORTHO05D008142 4.1e-186 655.2 539 64.2
Eucgr.F01169 Eucalyptus grandis HOM05D005607 ORTHO05D008142 2.7e-185 652.5 539 64.7
Potri.001G396500 Populus trichocarpa HOM05D005607 ORTHO05D008142 3.5e-185 652.1 540 66.5
Gohir.D05G347700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 1.0e-184 650.6 539 66.0
Gohir.A04G035700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 1.3e-184 650.2 539 65.9
MD03G1232700 Malus domestica HOM05D005607 ORTHO05D008142 1.3e-184 650.2 537 65.9
Gorai.009G375500 Gossypium raimondii HOM05D005607 ORTHO05D008142 6.6e-184 647.9 539 66.0
Ciclev10007885m.g Citrus clementina HOM05D005607 ORTHO05D008142 9.6e-183 644.0 539 64.9
Cpa.g.sc131.86 Carica papaya HOM05D005607 ORTHO05D008142 1.6e-182 643.3 539 64.6
Sabra16G0259600 Salix brachista HOM05D005607 ORTHO05D008142 1.1e-181 640.6 540 65.9
Nitab4.5_0008275g0010 Nicotiana tabacum HOM05D005607 ORTHO05D008142 1.2e-180 637.1 539 64.9
Prupe.4G175900 Prunus persica HOM05D005607 ORTHO05D008142 2.0e-180 636.3 537 64.6
Nitab4.5_0002330g0110 Nicotiana tabacum HOM05D005607 ORTHO05D008142 2.6e-180 636.0 539 64.9
CsaV3_4G033450 Cucumis sativus L. HOM05D005607 ORTHO05D008142 8.4e-179 630.9 537 62.6
MSTRG.12893 Avicennia marina HOM05D005607 ORTHO05D008142 1.9e-178 629.8 539 64.6
Nn1g04204 Nelumbo nucifera HOM05D005607 ORTHO05D008142 3.2e-178 629.0 537 65.2
Sopen07g031060 Solanum pennellii HOM05D005607 ORTHO05D008142 1.2e-177 627.1 539 63.3
MELO3C025610.2 Cucumis melo HOM05D005607 ORTHO05D008142 1.6e-177 626.7 537 62.0
Duzib213G0871 Durio zibethinus HOM05D005607 ORTHO05D008142 2.7e-177 625.9 510 66.9
CAN.G162.36 Capsicum annuum HOM05D005607 ORTHO05D008142 3.5e-177 625.5 539 63.8
RcHm_v2.0_Chr5g0032701 Rosa chinensis HOM05D005607 ORTHO05D008142 3.5e-177 625.5 539 64.9
Lj3g0025006 Lotus japonicus HOM05D005607 ORTHO05D008142 6.0e-177 624.8 536 64.0
Sed0013999 Sechium edule HOM05D005607 ORTHO05D008142 5.1e-176 621.7 537 61.5
PGR083G1887 Punica granatum HOM05D005607 ORTHO05D008142 1.9e-175 619.8 539 63.3
Oeu005401.4 Olea europaea HOM05D005607 ORTHO05D008142 7.3e-175 617.8 657 56.6
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 9.6e-175 617.5 581 60.6
Eucgr.F01141 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.6e-174 616.7 525 63.0
ClCG11G017810 Citrullus lanatus HOM05D005607 ORTHO05D008142 3.6e-174 615.5 551 61.0
arahy.Tifrunner.gnm1.ann1.K8QLTQ Arachis hypogaea HOM05D005607 ORTHO05D008142 4.8e-174 615.1 542 62.4
Glyma.06G236100 Glycine max HOM05D005607 ORTHO05D008142 3.4e-172 609.0 538 62.1
Ca_23036_v3 Cicer arietinum L. HOM05D005607 ORTHO05D008142 4.5e-172 608.6 530 62.8
Lsat_1_v5_gn_7_104480 Lactuca sativa HOM05D005607 ORTHO05D008142 1.3e-171 607.1 541 62.5
FvH4_3g19420 Fragaria vesca HOM05D005607 ORTHO05D008142 4.9e-171 605.1 539 62.9
arahy.Tifrunner.gnm1.ann1.3D346W Arachis hypogaea HOM05D005607 ORTHO05D008142 8.4e-171 604.4 542 61.3
HanXRQChr15g0495421 Helianthus annuus HOM05D005607 ORTHO05D008142 3.2e-170 602.4 540 62.0
Atru.chr2.2407 Acer truncatum HOM05D005607 ORTHO05D008142 5.4e-170 601.7 539 62.7
Sc16g0007180 Simmondsia chinensis HOM05D005607 ORTHO05D008142 2.7e-169 599.4 539 60.7
CANSAT35G0745 Cannabis sativa HOM05D005607 ORTHO05D008142 1.8e-168 596.7 537 61.1
ECA236G2999 Erigeron canadensis HOM05D005607 ORTHO05D008142 1.8e-168 596.7 540 61.1
Lalb_Chr19g0134061 Lupinus albus HOM05D005607 ORTHO05D008142 6.7e-168 594.7 537 61.6
MD11G1253400 Malus domestica HOM05D005607 ORTHO05D008142 2.5e-167 592.8 463 68.5
FAN16G0865 Fragaria x ananassa HOM05D005607 ORTHO05D008142 2.8e-166 589.3 553 61.5
DCAR_017123 Daucus carota HOM05D005607 ORTHO05D008142 8.1e-166 587.8 576 59.2
Medtr8g058790 Medicago truncatula HOM05D005607 ORTHO05D008142 2.4e-165 586.3 531 61.2
Medtr8g061280 Medicago truncatula HOM05D005607 ORTHO05D008142 2.4e-165 586.3 531 61.2
PSO832G0774 Papaver somniferum HOM05D005607 ORTHO05D008142 2.4e-165 586.3 535 59.4
PSO210G5410 Papaver somniferum HOM05D005607 ORTHO05D008142 2.0e-164 583.2 535 60.0
TPR.G28174 Trifolium pratense HOM05D005607 ORTHO05D008142 5.5e-162 575.1 537 59.8
THA.LOC104815562 Tarenaya hassleriana HOM05D005607 ORTHO05D008142 1.1e-159 567.4 539 58.4
VMungo1127G0827 Vigna mungo HOM05D005607 ORTHO05D008142 4.2e-154 548.9 535 57.8
Eucgr.F00890 Eucalyptus grandis HOM05D005607 ORTHO05D008142 5.5e-154 548.5 523 57.9
SGA_v2.0_scaffold130G34350 Striga asiatica HOM05D005607 ORTHO05D008142 3.0e-152 542.7 587 55.5
Aqoxy4G00691 Aquilegia oxysepala HOM05D005607 ORTHO05D008142 1.1e-149 534.3 463 62.0
AT3G15180 Arabidopsis thaliana HOM05D005607 ORTHO05D008142 3.1e-149 532.7 533 54.8
Duzib170G0139 Durio zibethinus HOM05D005607 ORTHO05D008142 5.3e-149 531.9 539 58.6
ATR0737G117 Amborella trichopoda HOM05D005607 ORTHO05D008142 1.5e-148 530.4 531 55.2
AL3G27570 Arabidopsis lyrata HOM05D005607 ORTHO05D008142 1.5e-148 530.4 533 54.8
Carub.0003s1483 Capsella rubella HOM05D005607 ORTHO05D008142 3.4e-148 529.3 533 54.6
Sp3g13390 Schrenkiella parvula HOM05D005607 ORTHO05D008142 7.9e-145 518.1 538 52.8
EL10Ac4g08241 Beta vulgaris HOM05D005607 ORTHO05D008142 1.1e-143 514.2 532 54.7
Ah.06g184600 Amaranthus hybridus HOM05D005607 ORTHO05D008142 4.8e-142 508.8 538 53.9
Thhalv10020515m.g Eutrema salsugineum HOM05D005607 ORTHO05D008142 8.2e-142 508.1 533 52.7
BraA05t22250Z Brassica rapa HOM05D005607 ORTHO05D008142 6.9e-141 505.0 533 52.5
CDE10G0361 Ceratophyllum demersum HOM05D005607 ORTHO05D008142 9.1e-141 504.6 541 54.2
Migut.H01958 Erythranthe guttata HOM05D005607 ORTHO05D008142 4.5e-140 502.3 459 61.0
BolC5t33890H Brassica oleracea HOM05D005607 ORTHO05D008142 6.5e-139 498.4 547 51.6
C05p52050 Brassica napus HOM05D005607 ORTHO05D008142 1.4e-138 497.3 515 54.0
Aa31LG8G2380 Aethionema arabicum HOM05D005607 ORTHO05D008142 9.4e-138 494.6 544 52.4
A05p34290 Brassica napus HOM05D005607 ORTHO05D008142 1.6e-137 493.8 515 53.2
Psat7g207160 Pisum sativum HOM05D005607 ORTHO05D008142 1.6e-137 493.8 417 64.0
Lj1A839T37 Lonicera japonica HOM05D005607 ORTHO05D008142 4.4e-135 485.7 401 68.3
BcaB06g29542 Brassica carinata HOM05D005607 ORTHO05D008142 9.7e-135 484.6 533 51.6
Phvul.011G160300 Phaseolus vulgaris HOM05D005607 ORTHO05D008142 3.0e-128 463.0 461 56.4
Peaxi162Scf00069g01839 Petunia axillaris HOM05D005607 ORTHO05D008142 8.0e-121 438.3 330 70.3
Lj1A839T35 Lonicera japonica HOM05D005607 ORTHO05D008142 4.0e-120 436.0 417 61.9
Os05g0557200 Oryza sativa ssp. japonica HOM05D005607 ORTHO05D008142 2.2e-118 430.3 528 46.2
Solyc07g062860.3 Solanum lycopersicum HOM05D005607 ORTHO05D008142 2.4e-117 426.8 338 66.9
Zm00001eb295460 Zea mays HOM05D005607 ORTHO05D008142 6.5e-115 418.7 540 44.6
Hund02235 Selenicereus undatus HOM05D005607 ORTHO05D008142 1.4e-109 401.0 401 57.6
AUR62036159 Chenopodium quinoa HOM05D005607 ORTHO05D008142 5.2e-104 382.5 538 45.0
AUR62019473 Chenopodium quinoa HOM05D005607 ORTHO05D008142 2.7e-100 370.2 568 42.8
SalBow7G3213 Salvia bowleyana HOM05D005607 ORTHO05D008142 2.2e-86 323.9 302 60.3
SalBow7G3521 Salvia bowleyana HOM05D005607 ORTHO05D008142 2.2e-86 323.9 302 60.3
QL08p023962 Quercus lobata HOM05D005607 ORTHO05D008142 2.1e-81 307.4 241 69.3
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 1.1e-80 305.1 399 49.1
MBI06_g04182_MAGBIO Magnolia biondii HOM05D005607 ORTHO05D008142 1.7e-78 297.7 370 52.4
AagrBONN_evm.TU.Sc2ySwM_344.1287 Anthoceros agrestis HOM05D005607 ORTHO05D008142 8.6e-75 285.4 525 37.0
FAN11G3919 Fragaria x ananassa HOM05D005607 ORTHO05D008142 2.6e-71 273.9 270 58.5
Pp3c1_12630 Physcomitrium patens HOM05D005607 ORTHO05D008142 6.4e-70 269.2 550 34.2
SMO139G0024 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 8.4e-70 268.9 535 35.7
MD11G1279000 Malus domestica HOM05D005607 ORTHO05D008142 1.2e-68 265.0 288 56.9
PGSC0003DMG400012404 Solanum tuberosum HOM05D005607 ORTHO05D008142 6.0e-60 236.1 215 59.1
QL08p023973 Quercus lobata HOM05D005607 ORTHO05D008142 4.3e-58 229.9 210 61.4
CARHR090160 Cardamine hirsuta HOM05D005607 ORTHO05D008142 4.5e-55 219.9 227 52.4
SMO145G0057 Selaginella moellendorffii HOM05D005607 ORTHO05D008142 1.4e-45 188.3 474 31.4
Glyma.12G162201 Glycine max HOM05D005607 ORTHO05D008142 4.3e-42 176.8 176 56.8
QL08p023949 Quercus lobata HOM05D005607 ORTHO05D008142 9.0e-40 169.1 106 78.3
Peaxi162Scf00069g01838 Petunia axillaris HOM05D005607 ORTHO05D008142 1.5e-39 168.3 175 57.1
FAN25G1444 Fragaria x ananassa HOM05D005607 ORTHO05D008142 3.0e-35 154.1 113 68.1
CBR_g2884 Chara braunii HOM05D005607 ORTHO05D008142 6.1e-28 129.8 289 34.9
SEGI_17376 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 2.2e-22 111.3 135 43.0
MELO3C033904.2 Cucumis melo HOM05D005607 ORTHO05D008142 1.0e-19 102.4 90 60.0
SEGI_34734 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 1.2e-15 89.0 138 42.8
HanXRQChr10g0304121 Helianthus annuus HOM05D005607 ORTHO05D008142 1.2e-12 79.0 63 68.3
EL10Ac6g14983 Beta vulgaris HOM05D005607 ORTHO05D008142 1.6e-12 78.6 100 45.0
CBR_g2888 Chara braunii HOM05D000019 ORTHO05D000002 3.6e-12 77.4 77 49.4
SEGI_12563 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 7.4e-10 69.7 73 50.7
MELO3C030698.2 Cucumis melo HOM05D005607 ORTHO05D169846 4.1e-08 63.9 138 38.4
MELO3C033981.2 Cucumis melo HOM05D005607 ORTHO05D166899 9.1e-08 62.8 69 53.6
RcHm_v2.0_Chr1g0340011 Rosa chinensis HOM05D005607 ORTHO05D008142 1.7e-06 58.5 55 56.4
Cre05.g246300 Chlamydomonas reinhardtii HOM05D005607 ORTHO05D008142 6.5e-06 56.6 172 27.9


User provided reference genes

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