Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003614 Camellia sinensis var. sinensis HOM05D002416 ORTHO05D002554 7.8e-22 106.3 56 100.0
Dinv23201 Davidia involucrata HOM05D002416 ORTHO05D002554 1.1e-15 85.9 54 81.5
Dinv11218 Davidia involucrata HOM05D002416 ORTHO05D002554 1.4e-15 85.5 54 81.5
ClCG01G009990 Citrullus lanatus HOM05D002416 ORTHO05D002554 1.2e-14 82.4 54 77.8
Hma1.2p1_0502F.1_g167893 Hydrangea macrophylla HOM05D002416 ORTHO05D002554 1.2e-14 82.4 54 79.6
Sed0004938 Sechium edule HOM05D002416 ORTHO05D002554 1.2e-14 82.4 54 79.6
CsaV3_1G018440 Cucumis sativus L. HOM05D002416 ORTHO05D002554 4.6e-14 80.5 54 74.1
Atru.chr6.1894 Acer truncatum HOM05D002416 ORTHO05D002554 7.8e-14 79.7 54 74.1
vmacro16746 Vaccinium macrocarpon HOM05D002416 ORTHO05D002554 7.8e-14 79.7 54 75.9
TWI23G0491 Tripterygium wilfordii HOM05D002416 ORTHO05D002554 1.0e-13 79.3 54 70.4
Actinidia36834 Actinidia chinensis HOM05D002416 ORTHO05D002554 1.3e-13 79.0 54 77.8
THA.LOC104821533 Tarenaya hassleriana HOM05D002416 ORTHO05D002554 1.3e-13 79.0 54 72.2
Actinidia18319 Actinidia chinensis HOM05D002416 ORTHO05D002554 2.3e-13 78.2 54 75.9
Lsat_1_v5_gn_5_10741 Lactuca sativa HOM05D002416 ORTHO05D002554 3.0e-13 77.8 54 75.9
Lj5C90T2 Lonicera japonica HOM05D002416 ORTHO05D002554 3.0e-13 77.8 54 70.4
Prupe.5G144500 Prunus persica HOM05D002416 ORTHO05D002554 3.9e-13 77.4 54 74.1
Actinidia08899 Actinidia chinensis HOM05D002416 ORTHO05D002554 1.5e-12 75.5 54 74.1
Rhsim12G0179900 Rhododendron simsii HOM05D002416 ORTHO05D002554 1.9e-12 75.1 54 72.2
CANSAT80G1361 Cannabis sativa HOM05D002416 ORTHO05D002554 3.3e-12 74.3 54 68.5
BcaB05g22984 Brassica carinata HOM05D002416 ORTHO05D002554 5.6e-12 73.6 54 66.7
Ciclev10031575m.g Citrus clementina HOM05D002416 ORTHO05D002554 5.6e-12 73.6 54 72.2
MSTRG.22882 Avicennia marina HOM05D002416 ORTHO05D002554 7.3e-12 73.2 54 72.2
HanXRQChr05g0152941 Helianthus annuus HOM05D002416 ORTHO05D002554 7.3e-12 73.2 54 72.2
ECA246G3437 Erigeron canadensis HOM05D002416 ORTHO05D002554 9.5e-12 72.8 54 68.5
Sabra12G0077200 Salix brachista HOM05D002416 ORTHO05D002554 9.5e-12 72.8 54 66.7
SGA_v2.0_scaffold74G24699 Striga asiatica HOM05D002416 ORTHO05D002554 9.5e-12 72.8 54 70.4
FvH4_5g09130 Fragaria vesca HOM05D002416 ORTHO05D002554 1.2e-11 72.4 54 68.5
FAN18G1315 Fragaria x ananassa HOM05D002416 ORTHO05D002554 1.2e-11 72.4 54 68.5
Peaxi162Scf00171g01121 Petunia axillaris HOM05D002416 ORTHO05D002554 1.2e-11 72.4 54 64.8
Sp5g13210 Schrenkiella parvula HOM05D002416 ORTHO05D002554 1.2e-11 72.4 54 64.8
FAN08G2766 Fragaria x ananassa HOM05D002416 ORTHO05D002554 2.1e-11 71.6 54 66.7
FAN13G3128 Fragaria x ananassa HOM05D002416 ORTHO05D002554 2.1e-11 71.6 54 66.7
Nn4g22183 Nelumbo nucifera HOM05D002416 ORTHO05D002554 2.1e-11 71.6 54 68.5
Gohir.A12G193000 Gossypium hirsutum HOM05D002416 ORTHO05D002554 2.8e-11 71.2 54 63.0
Gohir.D12G195100 Gossypium hirsutum HOM05D002416 ORTHO05D002554 2.8e-11 71.2 54 63.0
Gorai.008G209800 Gossypium raimondii HOM05D002416 ORTHO05D002554 2.8e-11 71.2 54 63.0
Duzib205G1373 Durio zibethinus HOM05D002416 ORTHO05D002554 3.6e-11 70.9 54 66.7
Sabra15G0123900 Salix brachista HOM05D002416 ORTHO05D002554 4.7e-11 70.5 54 64.8
Nitab4.5_0007858g0010 Nicotiana tabacum HOM05D002416 ORTHO05D002554 6.2e-11 70.1 54 63.0
RcHm_v2.0_Chr7g0189061 Rosa chinensis HOM05D002416 ORTHO05D002554 6.2e-11 70.1 54 63.0
PGSC0003DMG402019860 Solanum tuberosum HOM05D002416 ORTHO05D002554 6.2e-11 70.1 54 66.7
MD06G1133300 Malus domestica HOM05D002416 ORTHO05D002554 1.1e-10 69.3 54 64.8
Thecc.03G137900 Theobroma cacao HOM05D002416 ORTHO05D002554 1.1e-10 69.3 54 68.5
Migut.B00937 Erythranthe guttata HOM05D002416 ORTHO05D002554 1.4e-10 68.9 54 64.8
Migut.D01226 Erythranthe guttata HOM05D002416 ORTHO05D002554 1.4e-10 68.9 54 64.8
Nitab4.5_0005207g0020 Nicotiana tabacum HOM05D002416 ORTHO05D002554 1.4e-10 68.9 54 63.0
Potri.015G104100 Populus trichocarpa HOM05D002416 ORTHO05D002554 1.4e-10 68.9 54 63.0
AT3G48820 Arabidopsis thaliana HOM05D002416 ORTHO05D002554 2.3e-10 68.2 54 59.3
CiPaw.11G001900 Carya illinoinensis HOM05D002416 ORTHO05D002554 2.3e-10 68.2 54 64.8
MD14G1149700 Malus domestica HOM05D002416 ORTHO05D002554 2.3e-10 68.2 54 66.7
Cpa.g.sc4.113 Carica papaya HOM05D002416 ORTHO05D002554 3.1e-10 67.8 54 59.3
Eucgr.F04117 Eucalyptus grandis HOM05D002416 ORTHO05D002554 3.1e-10 67.8 54 59.3
FAN04G1768 Fragaria x ananassa HOM05D002416 ORTHO05D002554 3.1e-10 67.8 54 64.8
PGR119G0018 Punica granatum HOM05D002416 ORTHO05D002554 3.1e-10 67.8 54 63.0
Thhalv10010382m.g Eutrema salsugineum HOM05D002416 ORTHO05D002554 4.0e-10 67.4 54 59.3
Oeu058116.1 Olea europaea HOM05D002416 ORTHO05D002554 5.2e-10 67.0 54 63.0
Carub.0005s1499 Capsella rubella HOM05D002416 ORTHO05D002554 6.8e-10 66.6 54 59.3
GSVIVG01008625001 Vitis vinifera HOM05D002416 ORTHO05D002554 6.8e-10 66.6 54 61.1
Cfa018921 Carpinus fangiana HOM05D002416 ORTHO05D002554 8.9e-10 66.2 54 64.8
BcaC01g02378 Brassica carinata HOM05D002416 ORTHO05D002554 1.2e-09 65.9 60 56.7
A06p27960 Brassica napus HOM05D002416 ORTHO05D002554 1.2e-09 65.9 60 56.7
C03p65930 Brassica napus HOM05D002416 ORTHO05D002554 1.2e-09 65.9 60 56.7
BolC3t18851H Brassica oleracea HOM05D002416 ORTHO05D002554 1.2e-09 65.9 60 56.7
CAN.G637.55 Capsicum annuum HOM05D002416 ORTHO05D002554 1.5e-09 65.5 54 66.7
Oeu019024.1 Olea europaea HOM05D002416 ORTHO05D002554 1.5e-09 65.5 54 61.1
Sopen03g028530 Solanum pennellii HOM05D002416 ORTHO05D002554 1.5e-09 65.5 54 63.0
CARHR157640 Cardamine hirsuta HOM05D002416 ORTHO05D002554 2.0e-09 65.1 60 56.7
QL10p001052 Quercus lobata HOM05D002416 ORTHO05D002554 2.0e-09 65.1 54 59.3
TAR629G3032 Trochodendron aralioides HOM05D002416 ORTHO05D002554 2.6e-09 64.7 54 64.8
BraA06t25736Z Brassica rapa HOM05D002416 ORTHO05D002554 4.4e-09 63.9 60 55.0
TAR622G1255 Trochodendron aralioides HOM05D002416 ORTHO05D002554 5.8e-09 63.5 54 64.8
AL5G28330 Arabidopsis lyrata HOM05D002416 ORTHO05D002554 7.5e-09 63.2 60 55.0
BcaB02g09567 Brassica carinata HOM05D002416 ORTHO05D002554 9.8e-09 62.8 61 54.1
CiPaw.03G154500 Carya illinoinensis HOM05D002416 ORTHO05D002554 9.8e-09 62.8 54 59.3
Solyc03g097780.3 Solanum lycopersicum HOM05D002416 ORTHO05D002554 1.3e-08 62.4 54 59.3
HPP92_022382 Vanilla planifolia HOM05D002416 ORTHO05D002554 1.7e-08 62.0 54 55.6
Aa31LG4G17350 Aethionema arabicum HOM05D002416 ORTHO05D002554 2.9e-08 61.2 61 54.1
Sc22g0003520 Simmondsia chinensis HOM05D002416 ORTHO05D002554 2.9e-08 61.2 54 55.6
Phvul.002G327200 Phaseolus vulgaris HOM05D002416 ORTHO05D002554 1.4e-07 58.9 56 58.9
Glyma.08G051300 Glycine max HOM05D002416 ORTHO05D002554 1.9e-07 58.5 56 57.1
VMungo0251G1339 Vigna mungo HOM05D002416 ORTHO05D002554 1.9e-07 58.5 56 58.9
Glyma.05G243500 Glycine max HOM05D002416 ORTHO05D002554 2.4e-07 58.2 56 57.1
Medtr8g099840 Medicago truncatula HOM05D002416 ORTHO05D002554 2.4e-07 58.2 56 55.4
ATR0691G177 Amborella trichopoda HOM05D002416 ORTHO05D002554 3.2e-07 57.8 54 53.7
TPR.G12748 Trifolium pratense HOM05D002416 ORTHO05D002554 3.2e-07 57.8 56 55.4
CDE09G0993 Ceratophyllum demersum HOM05D002416 ORTHO05D002554 4.1e-07 57.4 54 55.6
arahy.Tifrunner.gnm1.ann1.U25A6K Arachis hypogaea HOM05D002416 ORTHO05D002554 5.4e-07 57.0 56 55.4
AUR62029524 Chenopodium quinoa HOM05D002416 ORTHO05D002554 5.4e-07 57.0 54 51.9
PSO017G0289 Papaver somniferum HOM05D002416 ORTHO05D002554 5.4e-07 57.0 54 57.4
Psat7g038520 Pisum sativum HOM05D002416 ORTHO05D002554 5.4e-07 57.0 56 53.6
Hund10069 Selenicereus undatus HOM05D002416 ORTHO05D002554 5.4e-07 57.0 54 53.7
EL10Ac5g11330 Beta vulgaris HOM05D002416 ORTHO05D002554 7.0e-07 56.6 54 51.9
Lalb_Chr07g0183721 Lupinus albus HOM05D002416 ORTHO05D002554 9.2e-07 56.2 56 53.6
Lalb_Chr13g0297061 Lupinus albus HOM05D002416 ORTHO05D002554 9.2e-07 56.2 56 55.4
MBI11_g08160_MAGBIO Magnolia biondii HOM05D002416 ORTHO05D002554 1.2e-06 55.8 54 53.7
AUR62034783 Chenopodium quinoa HOM05D002416 ORTHO05D002554 2.1e-06 55.1 54 50.0
PSO063G4485 Papaver somniferum HOM05D002416 ORTHO05D002554 2.7e-06 54.7 55 56.4
Ah.07g203590 Amaranthus hybridus HOM05D002416 ORTHO05D002554 3.5e-06 54.3 54 50.0
Cc04_g09440 Coffea canephora HOM05D002416 ORTHO05D002554 4.6e-06 53.9 60 51.7
Duzib084G1062 Durio zibethinus HOM05D002416 ORTHO05D002554 4.6e-06 53.9 54 55.6
ATR1145G070 Amborella trichopoda HOM05D002416 ORTHO05D002554 6.0e-06 53.5 54 48.1
PSO170G5695 Papaver somniferum HOM05D002416 ORTHO05D002554 7.8e-06 53.1 55 54.5


User provided reference genes

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