Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003579 Camellia sinensis var. sinensis HOM05D004405 ORTHO05D005613 1.7e-91 339.3 170 100.0
CSS0002613 Camellia sinensis var. sinensis HOM05D004405 ORTHO05D005613 1.7e-80 302.8 163 93.3
CSS0015821 Camellia sinensis var. sinensis HOM05D004405 ORTHO05D005613 1.7e-80 302.8 163 93.3
CSS0021517 Camellia sinensis var. sinensis HOM05D004405 ORTHO05D005613 1.7e-80 302.8 163 93.3
vmacro21541 Vaccinium macrocarpon HOM05D004405 ORTHO05D005613 8.5e-72 273.9 163 81.0
Dinv35974 Davidia involucrata HOM05D004405 ORTHO05D005613 2.5e-71 272.3 163 83.4
Rhsim06G0048000 Rhododendron simsii HOM05D000235 ORTHO05D000147 2.7e-70 268.9 163 79.8
Actinidia23262 Actinidia chinensis HOM05D004405 ORTHO05D005613 4.7e-70 268.1 161 81.4
vmacro05293 Vaccinium macrocarpon HOM05D004405 ORTHO05D005613 8.8e-69 263.8 159 79.9
Hma1.2p1_0982F.1_g243850 Hydrangea macrophylla HOM05D004405 ORTHO05D005613 2.6e-68 262.3 163 78.5
CSS0001980 Camellia sinensis var. sinensis HOM05D004405 ORTHO05D005613 1.4e-66 256.5 138 92.0
Thecc.08G011300 Theobroma cacao HOM05D004405 ORTHO05D005613 4.1e-66 255.0 161 75.8
Lj5C9T2 Lonicera japonica HOM05D004405 ORTHO05D005613 2.7e-65 252.3 163 76.1
Cpa.g.sc8.57 Carica papaya HOM05D004405 ORTHO05D005613 3.5e-65 251.9 159 78.0
TAR381G0414 Trochodendron aralioides HOM05D004405 ORTHO05D005613 5.9e-65 251.1 163 74.8
Lj5C589T2 Lonicera japonica HOM05D004405 ORTHO05D005613 7.7e-65 250.8 163 75.5
Manes.18G032800 Manihot esculenta HOM05D004405 ORTHO05D005613 7.7e-65 250.8 163 76.1
Lj4A775T68 Lonicera japonica HOM05D004405 ORTHO05D005613 1.3e-64 250.0 163 74.8
CSS0018141 Camellia sinensis var. sinensis HOM05D004405 ORTHO05D005613 6.5e-64 247.7 159 81.8
Prupe.1G439200 Prunus persica HOM05D004405 ORTHO05D005613 1.5e-63 246.5 161 70.8
Nn1g05838 Nelumbo nucifera HOM05D004405 ORTHO05D005613 1.2e-62 243.4 163 73.0
Potri.014G032400 Populus trichocarpa HOM05D004405 ORTHO05D005613 1.2e-62 243.4 163 71.8
Duzib093G0211 Durio zibethinus HOM05D004405 ORTHO05D005613 1.6e-62 243.0 163 71.8
Eucgr.F00243 Eucalyptus grandis HOM05D004405 ORTHO05D005613 2.7e-62 242.3 163 68.7
GSVIVG01009527001 Vitis vinifera HOM05D004405 ORTHO05D005613 2.7e-62 242.3 163 73.0
Sabra14G0022800 Salix brachista HOM05D004405 ORTHO05D005613 1.0e-61 240.4 163 69.9
Nn5g30223 Nelumbo nucifera HOM05D004405 ORTHO05D005613 1.8e-61 239.6 163 73.6
CSS0039327 Camellia sinensis var. sinensis HOM05D004405 ORTHO05D005613 3.0e-61 238.8 131 91.6
TWI36G1713 Tripterygium wilfordii HOM05D004405 ORTHO05D005613 3.0e-61 238.8 163 69.9
Gohir.A06G016900 Gossypium hirsutum HOM05D004405 ORTHO05D005613 5.2e-61 238.0 160 71.2
Gohir.D06G015000 Gossypium hirsutum HOM05D004405 ORTHO05D005613 5.2e-61 238.0 160 71.2
Gorai.010G017800 Gossypium raimondii HOM05D004405 ORTHO05D005613 5.2e-61 238.0 160 71.2
QL02p005410 Quercus lobata HOM05D004405 ORTHO05D005613 5.2e-61 238.0 163 71.2
Duzib116G0463 Durio zibethinus HOM05D004405 ORTHO05D005613 8.8e-61 237.3 159 72.3
MD15G1085100 Malus domestica HOM05D004405 ORTHO05D005613 1.5e-60 236.5 161 67.7
Cc10_g04350 Coffea canephora HOM05D004405 ORTHO05D005613 3.4e-60 235.3 163 70.6
CAN.G371.36 Capsicum annuum HOM05D004405 ORTHO05D005613 5.7e-60 234.6 164 68.3
FAN15G0428 Fragaria x ananassa HOM05D004405 ORTHO05D005613 1.7e-59 233.0 162 66.7
COL.COLO4_26473 Corchorus olitorius HOM05D004405 ORTHO05D005613 2.2e-59 232.6 163 69.3
Lalb_Chr14g0368801 Lupinus albus HOM05D004405 ORTHO05D005613 2.2e-59 232.6 162 66.0
MD08G1103900 Malus domestica HOM05D004405 ORTHO05D005613 2.2e-59 232.6 161 67.7
Aa31sc924G10 Aethionema arabicum HOM05D004405 ORTHO05D005613 3.7e-59 231.9 163 68.7
Ca_13303_v3 Cicer arietinum L. HOM05D004405 ORTHO05D005613 3.7e-59 231.9 163 66.9
Aqoxy5G01271 Aquilegia oxysepala HOM05D004405 ORTHO05D005613 4.9e-59 231.5 163 67.5
FvH4_2g34650 Fragaria vesca HOM05D004405 ORTHO05D005613 4.9e-59 231.5 162 66.0
FAN27G0612 Fragaria x ananassa HOM05D004405 ORTHO05D005613 4.9e-59 231.5 162 66.0
TWI36G1445 Tripterygium wilfordii HOM05D004405 ORTHO05D005613 4.9e-59 231.5 163 68.7
CAN.G1422.6 Capsicum annuum HOM05D004405 ORTHO05D005613 6.3e-59 231.1 163 67.5
FAN20G0125 Fragaria x ananassa HOM05D004405 ORTHO05D005613 6.3e-59 231.1 162 66.0
Sc15g0006290 Simmondsia chinensis HOM05D004405 ORTHO05D005613 8.3e-59 230.7 159 68.6
Nitab4.5_0000686g0020 Nicotiana tabacum HOM05D004405 ORTHO05D005613 1.1e-58 230.3 163 68.1
Solyc04g079180.3 Solanum lycopersicum HOM05D004405 ORTHO05D005613 1.1e-58 230.3 163 68.1
THA.LOC104813205 Tarenaya hassleriana HOM05D004405 ORTHO05D005613 1.4e-58 229.9 161 68.9
Lalb_Chr24g0399241 Lupinus albus HOM05D004405 ORTHO05D005613 1.8e-58 229.6 163 65.6
Medtr1g019810 Medicago truncatula HOM05D004405 ORTHO05D005613 2.4e-58 229.2 161 67.7
arahy.Tifrunner.gnm1.ann1.G214E9 Arachis hypogaea HOM05D004405 ORTHO05D005613 3.1e-58 228.8 163 65.6
arahy.Tifrunner.gnm1.ann1.P974E5 Arachis hypogaea HOM05D004405 ORTHO05D005613 3.1e-58 228.8 163 65.6
BcaB04g17525 Brassica carinata HOM05D004405 ORTHO05D005613 4.1e-58 228.4 163 67.5
CiPaw.15G061900 Carya illinoinensis HOM05D004405 ORTHO05D005613 4.1e-58 228.4 163 67.5
Glyma.14G081700 Glycine max HOM05D004405 ORTHO05D005613 4.1e-58 228.4 163 65.6
Lj5g0011335 Lotus japonicus HOM05D004405 ORTHO05D005613 5.4e-58 228.0 163 63.8
Nitab4.5_0001101g0090 Nicotiana tabacum HOM05D004405 ORTHO05D005613 5.4e-58 228.0 163 66.9
PGSC0003DMG400008025 Solanum tuberosum HOM05D004405 ORTHO05D005613 5.4e-58 228.0 163 68.1
THA.LOC104806948 Tarenaya hassleriana HOM05D004405 ORTHO05D005613 5.4e-58 228.0 163 68.1
TPR.G13673 Trifolium pratense HOM05D004405 ORTHO05D005613 7.0e-58 227.6 161 67.1
SGA_v2.0_scaffold114G31897 Striga asiatica HOM05D004405 ORTHO05D005613 9.2e-58 227.3 163 66.9
Glyma.17G243600 Glycine max HOM05D004405 ORTHO05D005613 1.2e-57 226.9 163 64.4
Sopen04g032790 Solanum pennellii HOM05D004405 ORTHO05D005613 1.2e-57 226.9 163 66.9
Peaxi162Scf00528g00045 Petunia axillaris HOM05D004405 ORTHO05D005613 1.6e-57 226.5 163 66.3
PGR083G0008 Punica granatum HOM05D004405 ORTHO05D005613 1.6e-57 226.5 163 64.4
RcHm_v2.0_Chr6g0307421 Rosa chinensis HOM05D004405 ORTHO05D005613 2.0e-57 226.1 162 65.4
Thhalv10011700m.g Eutrema salsugineum HOM05D004405 ORTHO05D005613 2.7e-57 225.7 163 66.3
Nitab4.5_0000453g0210 Nicotiana tabacum HOM05D004405 ORTHO05D005613 2.7e-57 225.7 163 66.3
Aa31sc213G20 Aethionema arabicum HOM05D004405 ORTHO05D005613 3.5e-57 225.3 163 66.3
ATR0824G121 Amborella trichopoda HOM05D004405 ORTHO05D005613 3.5e-57 225.3 163 67.5
A08p05640 Brassica napus HOM05D004405 ORTHO05D005613 3.5e-57 225.3 163 66.3
Manes.05G171800 Manihot esculenta HOM05D004405 ORTHO05D005613 4.5e-57 224.9 159 71.1
Haze_17546 Corylus avellana HOM05D004405 ORTHO05D005613 5.9e-57 224.6 163 66.9
Haze_17555 Corylus avellana HOM05D004405 ORTHO05D005613 5.9e-57 224.6 163 66.9
Sopen12g030800 Solanum pennellii HOM05D004405 ORTHO05D005613 1.0e-56 223.8 162 67.3
PGSC0003DMG400015445 Solanum tuberosum HOM05D004405 ORTHO05D005613 1.0e-56 223.8 162 67.3
BcaC07g37214 Brassica carinata HOM05D004405 ORTHO05D005613 1.3e-56 223.4 163 65.6
C08p06290 Brassica napus HOM05D004405 ORTHO05D005613 1.3e-56 223.4 163 65.6
BolC8t47475H Brassica oleracea HOM05D004405 ORTHO05D005613 1.3e-56 223.4 163 65.6
Peaxi162Scf00064g00017 Petunia axillaris HOM05D004405 ORTHO05D005613 2.3e-56 222.6 163 66.3
Sp1g34510 Schrenkiella parvula HOM05D004405 ORTHO05D005613 2.3e-56 222.6 163 65.6
SpUn0102_0010 Schrenkiella parvula HOM05D004405 ORTHO05D005613 2.3e-56 222.6 163 65.6
AT1G47420 Arabidopsis thaliana HOM05D004405 ORTHO05D005613 2.9e-56 222.2 163 64.4
CARHR037030 Cardamine hirsuta HOM05D004405 ORTHO05D005613 2.9e-56 222.2 163 65.0
HanXRQChr04g0103551 Helianthus annuus HOM05D004405 ORTHO05D005613 2.9e-56 222.2 163 64.4
Solyc12g088900.2 Solanum lycopersicum HOM05D004405 ORTHO05D005613 2.9e-56 222.2 162 67.3
A10p06390 Brassica napus HOM05D004405 ORTHO05D005613 3.8e-56 221.9 163 65.6
BraA08t32566Z Brassica rapa HOM05D004405 ORTHO05D005613 3.8e-56 221.9 163 65.0
BcaB07g33838 Brassica carinata HOM05D004405 ORTHO05D005613 5.0e-56 221.5 163 65.6
BcaC08g42948 Brassica carinata HOM05D004405 ORTHO05D005613 6.6e-56 221.1 163 65.6
C06p01920 Brassica napus HOM05D004405 ORTHO05D005613 6.6e-56 221.1 163 65.6
Cfa018524 Carpinus fangiana HOM05D004405 ORTHO05D005613 6.6e-56 221.1 161 65.8
AL1G53710 Arabidopsis lyrata HOM05D004405 ORTHO05D005613 8.6e-56 220.7 163 63.8
Phvul.001G020600 Phaseolus vulgaris HOM05D004405 ORTHO05D005613 8.6e-56 220.7 163 63.2
VMungo0647G1810 Vigna mungo HOM05D004405 ORTHO05D005613 8.6e-56 220.7 163 62.6
Atru.chr7.31 Acer truncatum HOM05D004405 ORTHO05D005613 1.5e-55 219.9 163 65.6
MSTRG.4418 Avicennia marina HOM05D004405 ORTHO05D005613 1.5e-55 219.9 160 66.2
Ciclev10002311m.g Citrus clementina HOM05D004405 ORTHO05D005613 1.5e-55 219.9 163 65.0
Psat6g012760 Pisum sativum HOM05D004405 ORTHO05D005613 1.5e-55 219.9 161 64.6
SGA_v2.0_scaffold7G04073 Striga asiatica HOM05D004405 ORTHO05D005613 1.9e-55 219.5 163 64.4
Nitab4.5_0004184g0030 Nicotiana tabacum HOM05D004405 ORTHO05D005613 3.3e-55 218.8 163 64.4
Carub.0001s3623 Capsella rubella HOM05D004405 ORTHO05D005613 5.6e-55 218.0 163 64.4
PSO063G4876 Papaver somniferum HOM05D004405 ORTHO05D005613 5.6e-55 218.0 162 64.2
CsaV3_2G028080 Cucumis sativus L. HOM05D004405 ORTHO05D005613 1.2e-54 216.9 161 65.2
PSO782G1589 Papaver somniferum HOM05D004405 ORTHO05D005613 1.2e-54 216.9 162 63.0
ECA247G2210 Erigeron canadensis HOM05D004405 ORTHO05D005613 1.6e-54 216.5 163 62.6
CiPaw.16G046000 Carya illinoinensis HOM05D004405 ORTHO05D005613 2.1e-54 216.1 147 71.4
DCAR_015085 Daucus carota HOM05D004405 ORTHO05D005613 6.1e-54 214.5 163 65.0
MBI06_g04501_MAGBIO Magnolia biondii HOM05D004405 ORTHO05D005613 6.1e-54 214.5 161 66.5
CANSAT54G1019 Cannabis sativa HOM05D004405 ORTHO05D005613 2.3e-53 212.6 163 58.9
ECA233G0805 Erigeron canadensis HOM05D004405 ORTHO05D005613 3.0e-53 212.2 163 61.3
MELO3C010886.2 Cucumis melo HOM05D004405 ORTHO05D005613 4.0e-53 211.8 161 64.0
MSTRG.9635 Avicennia marina HOM05D004405 ORTHO05D005613 5.2e-53 211.5 163 61.3
BolSC99t61278H Brassica oleracea HOM05D004405 ORTHO05D005613 5.2e-53 211.5 159 65.4
Zm00001eb217160 Zea mays HOM05D004405 ORTHO05D005613 5.2e-53 211.5 157 66.9
Zm00001eb053470 Zea mays HOM05D004405 ORTHO05D005613 8.9e-53 210.7 157 66.9
Migut.D01835 Erythranthe guttata HOM05D004405 ORTHO05D005613 1.2e-52 210.3 160 61.9
PGR031G1065 Punica granatum HOM05D004405 ORTHO05D005613 1.5e-52 209.9 160 62.5
Ah.01g019210 Amaranthus hybridus HOM05D004405 ORTHO05D005613 5.7e-52 208.0 162 61.7
Nn7g38185 Nelumbo nucifera HOM05D004405 ORTHO05D005613 2.2e-51 206.1 136 73.5
ClCG08G015700 Citrullus lanatus HOM05D004405 ORTHO05D005613 3.7e-51 205.3 161 62.1
Manes.05G171801 Manihot esculenta HOM05D004405 ORTHO05D005613 6.4e-51 204.5 159 67.3
Os04g0418000 Oryza sativa ssp. japonica HOM05D004405 ORTHO05D005613 1.1e-50 203.8 157 63.7
AUR62019554 Chenopodium quinoa HOM05D004405 ORTHO05D005613 1.4e-50 203.4 159 61.0
SalBow7G1402 Salvia bowleyana HOM05D004405 ORTHO05D005613 7.0e-50 201.1 163 57.7
EL10Ac7g16991 Beta vulgaris HOM05D004405 ORTHO05D005613 9.2e-50 200.7 161 61.5
Lsat_1_v5_gn_1_20160 Lactuca sativa HOM05D004405 ORTHO05D005613 1.2e-49 200.3 164 58.5
AUR62037877 Chenopodium quinoa HOM05D004405 ORTHO05D005613 2.7e-49 199.1 163 58.3
unitig_21.g20460 Utricularia gibba HOM05D004405 ORTHO05D005613 2.7e-49 199.1 163 57.7
CSS0025487 Camellia sinensis var. sinensis HOM05D004405 ORTHO05D005613 1.1e-47 193.7 121 84.3
HPP92_014066 Vanilla planifolia HOM05D004405 ORTHO05D005613 3.3e-47 192.2 163 58.3
Sed0012636 Sechium edule HOM05D004405 ORTHO05D005613 2.1e-46 189.5 161 57.8
SEGI_20825 Sequoiadendron giganteum HOM05D004405 ORTHO05D005613 2.1e-46 189.5 157 59.2
SEGI_22288 Sequoiadendron giganteum HOM05D004405 ORTHO05D005613 1.4e-45 186.8 157 58.6
Aqoxy6G01363 Aquilegia oxysepala HOM05D004405 ORTHO05D005613 5.2e-45 184.9 159 58.5
CDE01G0147 Ceratophyllum demersum HOM05D004405 ORTHO05D005613 4.1e-42 175.3 157 55.4
BolC6t35323H Brassica oleracea HOM05D004405 ORTHO05D005613 3.0e-40 169.1 145 60.7
CSS0003400 Camellia sinensis var. sinensis HOM05D004405 ORTHO05D005613 8.9e-37 157.5 85 88.2
MD04G1229600 Malus domestica HOM05D004405 ORTHO05D005613 7.5e-36 154.5 110 65.5
FvH4_2g34710 Fragaria vesca HOM05D004405 ORTHO05D005613 2.1e-33 146.4 97 68.0
SGA_v2.0_scaffold7G04074 Striga asiatica HOM05D004405 ORTHO05D005613 1.6e-30 136.7 149 51.0
Pp3c21_1560 Physcomitrium patens HOM05D004405 ORTHO05D005613 1.1e-26 124.0 158 41.1
Mapoly0033s0094 Marchantia polymorpha HOM05D004405 ORTHO05D005613 3.1e-21 105.9 157 35.0
AagrBONN_evm.TU.Sc2ySwM_344.3923 Anthoceros agrestis HOM05D004405 ORTHO05D005613 5.2e-21 105.1 156 35.3
CBR_g38490 Chara braunii HOM05D004405 ORTHO05D005613 4.9e-19 98.6 155 36.1
SMO351G0505 Selaginella moellendorffii HOM05D004405 ORTHO05D005613 1.1e-18 97.4 142 38.0
Lsat_1_v5_gn_2_117301 Lactuca sativa HOM05D004405 ORTHO05D005613 2.7e-17 92.8 85 54.1
Lsat_1_v5_gn_0_36860 Lactuca sativa HOM05D004405 ORTHO05D005613 1.3e-14 84.0 87 44.8
Actinidia22615 Actinidia chinensis HOM05D004405 ORTHO05D005613 1.3e-11 73.9 43 79.1
PRCOL_00004317 Prasinoderma coloniale HOM05D004405 ORTHO05D005613 4.2e-10 68.9 130 32.3


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