Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003575 Camellia sinensis var. sinensis HOM05D015447 ORTHO05D111760 7.9e-39 163.3 83 100.0
CSS0031327 Camellia sinensis var. sinensis HOM05D015447 ORTHO05D112739 4.8e-20 100.9 83 67.5
CSS0011321 Camellia sinensis var. sinensis HOM05D015447 ORTHO05D112666 7.7e-18 93.6 83 60.2
CSS0017934 Camellia sinensis var. sinensis HOM05D015447 ORTHO05D113528 1.3e-17 92.8 83 60.2
CSS0019532 Camellia sinensis var. sinensis HOM05D015447 ORTHO05D112571 6.5e-17 90.5 83 61.4
CSS0030620 Camellia sinensis var. sinensis HOM05D015447 ORTHO05D110165 2.5e-16 88.6 83 60.2
CSS0027190 Camellia sinensis var. sinensis HOM05D015447 ORTHO05D110024 6.1e-15 84.0 83 57.8
CSS0048174 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-11 72.0 110 42.7
CSS0013612 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.0e-11 70.5 108 42.6
CSS0016958 Camellia sinensis var. sinensis HOM05D015447 ORTHO05D109488 9.1e-11 70.1 84 53.6
CSS0029899 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.7e-10 68.6 112 40.2
CSS0033338 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.5e-10 68.2 108 41.7
CSS0002733 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-10 67.8 108 40.7
CSS0013933 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-09 66.2 108 39.8
CSS0014474 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-09 65.5 108 39.8
CSS0006954 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-08 62.4 108 38.9
CSS0023138 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.2e-08 60.5 108 38.9
CSS0032719 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-07 58.9 108 38.0
CSS0032084 Camellia sinensis var. sinensis HOM05D001967 ORTHO05D001929 2.7e-07 58.5 75 48.0
SHI08481 Sapria himalayana HOM05D000002 ORTHO05D000001 8.0e-07 57.0 70 42.9
CSS0041337 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-06 56.6 108 37.0
PSO675G7810 Papaver somniferum HOM05D000002 ORTHO05D000001 1.0e-06 56.6 122 32.8
CSS0040737 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-06 55.8 108 34.3
SHI18354 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-06 55.8 77 39.0
CSS0007533 Camellia sinensis var. sinensis HOM05D003147 ORTHO05D003245 3.0e-06 55.1 102 37.3
SHI17008 Sapria himalayana HOM05D000002 ORTHO05D000001 4.0e-06 54.7 88 37.5
SHI23844 Sapria himalayana HOM05D000002 ORTHO05D000001 4.0e-06 54.7 65 36.9
PSO210G1619 Papaver somniferum HOM05D000002 ORTHO05D000001 6.8e-06 53.9 122 30.3
PSO386G0241 Papaver somniferum HOM05D000002 ORTHO05D000001 8.8e-06 53.5 122 31.1
SHI18799 Sapria himalayana HOM05D000002 ORTHO05D000001 8.8e-06 53.5 81 35.8


User provided reference genes

Program Settings