Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003565 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 8.0e-250 866.7 455 100.0
CSS0028019 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 2.6e-248 861.7 455 99.6
Actinidia23029 Actinidia chinensis HOM05D004969 ORTHO05D006085 1.7e-175 619.8 471 73.9
Dinv41780 Davidia involucrata HOM05D004969 ORTHO05D006085 7.9e-157 557.8 420 73.6
TAR381G0816 Trochodendron aralioides HOM05D004969 ORTHO05D006085 1.1e-153 547.4 455 68.8
GSVIVG01025999001 Vitis vinifera HOM05D004969 ORTHO05D006085 7.7e-152 541.2 453 67.8
Rhsim12G0005600 Rhododendron simsii HOM05D004969 ORTHO05D006085 1.6e-149 533.5 509 61.9
Migut.N03359 Erythranthe guttata HOM05D004969 ORTHO05D006085 4.7e-141 505.4 454 64.8
MSTRG.22462 Avicennia marina HOM05D004969 ORTHO05D006085 2.6e-139 499.6 457 63.9
Peaxi162Scf00391g00434 Petunia axillaris HOM05D004969 ORTHO05D006085 3.3e-139 499.2 456 63.4
Lj6g0017586 Lotus japonicus HOM05D004969 ORTHO05D006085 1.8e-137 493.4 456 63.6
Prupe.2G102700 Prunus persica HOM05D004969 ORTHO05D006085 2.4e-137 493.0 464 62.7
MBI06_g36481_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 2.9e-135 486.1 454 63.9
CAN.G2.7 Capsicum annuum HOM05D004969 ORTHO05D006085 1.1e-134 484.2 459 63.2
Nitab4.5_0003818g0050 Nicotiana tabacum HOM05D004969 ORTHO05D006085 1.5e-134 483.8 478 59.8
MD07G1079600 Malus domestica HOM05D004969 ORTHO05D006085 1.2e-133 480.7 463 60.5
Cc10_g11320 Coffea canephora HOM05D004969 ORTHO05D006085 2.7e-133 479.6 456 62.5
Nitab4.5_0000365g0150 Nicotiana tabacum HOM05D004969 ORTHO05D006085 4.7e-133 478.8 475 59.8
Solyc11g020300.2 Solanum lycopersicum HOM05D004969 ORTHO05D006085 8.0e-133 478.0 456 62.1
MD02G1235900 Malus domestica HOM05D004969 ORTHO05D006085 2.6e-131 473.0 408 65.7
HanXRQChr02g0036761 Helianthus annuus HOM05D004969 ORTHO05D006085 5.7e-131 471.9 464 59.5
Phvul.006G083300 Phaseolus vulgaris HOM05D004969 ORTHO05D006085 1.3e-130 470.7 452 62.2
Gorai.001G088300 Gossypium raimondii HOM05D004969 ORTHO05D006085 4.8e-130 468.8 458 63.1
Lalb_Chr18g0053961 Lupinus albus HOM05D004969 ORTHO05D006085 6.3e-130 468.4 460 61.7
Potri.004G087100 Populus trichocarpa HOM05D004969 ORTHO05D006085 8.2e-130 468.0 467 59.7
Gohir.A07G077900 Gossypium hirsutum HOM05D004969 ORTHO05D006085 7.0e-129 464.9 458 60.9
Aqoxy2G02250 Aquilegia oxysepala HOM05D004969 ORTHO05D006085 1.2e-128 464.2 466 58.6
VMungo0540G2242 Vigna mungo HOM05D004969 ORTHO05D006085 1.2e-128 464.2 452 61.1
Duzib133G0278 Durio zibethinus HOM05D004969 ORTHO05D006085 2.0e-128 463.4 460 61.3
Cpa.g.sc116.57 Carica papaya HOM05D004969 ORTHO05D006085 2.7e-128 463.0 457 60.6
PGR042G0690 Punica granatum HOM05D004969 ORTHO05D006085 3.5e-128 462.6 449 62.1
Sopen11g010590 Solanum pennellii HOM05D004969 ORTHO05D006085 3.5e-128 462.6 446 61.9
RcHm_v2.0_Chr1g0339281 Rosa chinensis HOM05D004969 ORTHO05D006085 5.9e-128 461.8 450 60.4
Lalb_Chr15g0085491 Lupinus albus HOM05D004969 ORTHO05D006085 1.3e-127 460.7 458 62.2
Glyma.11G202700 Glycine max HOM05D004969 ORTHO05D006085 8.5e-127 458.0 449 61.9
Manes.02G076800 Manihot esculenta HOM05D004969 ORTHO05D006085 1.9e-126 456.8 462 60.0
Ca_15098_v3 Cicer arietinum L. HOM05D004969 ORTHO05D006085 4.2e-126 455.7 464 59.5
Cfa005580 Carpinus fangiana HOM05D004969 ORTHO05D006085 5.5e-126 455.3 399 65.4
Potri.017G129800 Populus trichocarpa HOM05D004969 ORTHO05D006085 7.2e-126 454.9 456 59.0
Glyma.18G048200 Glycine max HOM05D004969 ORTHO05D006085 4.7e-125 452.2 454 61.9
TWI53G0342 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 1.4e-124 450.7 471 57.7
HanXRQChr04g0102091 Helianthus annuus HOM05D004969 ORTHO05D006085 2.3e-124 449.9 462 58.2
Duzib211G0057 Durio zibethinus HOM05D004969 ORTHO05D006085 5.2e-124 448.7 416 62.7
FvH4_7g07530 Fragaria vesca HOM05D004969 ORTHO05D006085 5.2e-124 448.7 386 64.0
Thecc.04G114600 Theobroma cacao HOM05D004969 ORTHO05D006085 5.2e-124 448.7 459 59.9
CiPaw.06G151300 Carya illinoinensis HOM05D004969 ORTHO05D006085 1.2e-123 447.6 387 64.3
TWI77G0063 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 3.4e-123 446.0 471 58.2
CDE04G1977 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 2.8e-122 443.0 384 65.4
CsaV3_5G020190 Cucumis sativus L. HOM05D004969 ORTHO05D006085 4.8e-122 442.2 417 60.0
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 1.4e-121 440.7 390 67.2
Nn5g27434 Nelumbo nucifera HOM05D004969 ORTHO05D006085 1.0e-119 434.5 454 60.4
Medtr3g063200 Medicago truncatula HOM05D004969 ORTHO05D006085 1.3e-119 434.1 455 58.7
PSO170G6732 Papaver somniferum HOM05D004969 ORTHO05D006085 1.7e-119 433.7 462 58.7
CANSAT78G2392 Cannabis sativa HOM05D004969 ORTHO05D006085 2.3e-119 433.3 425 61.6
MELO3C025065.2 Cucumis melo HOM05D004969 ORTHO05D006085 3.8e-119 432.6 417 59.2
PSO017G0293 Papaver somniferum HOM05D004969 ORTHO05D006085 3.8e-119 432.6 461 58.1
ECA247G1475 Erigeron canadensis HOM05D004969 ORTHO05D006085 8.6e-119 431.4 420 60.2
Lsat_1_v5_gn_1_25461 Lactuca sativa HOM05D004969 ORTHO05D006085 4.2e-118 429.1 455 56.7
Eucgr.A02100 Eucalyptus grandis HOM05D004969 ORTHO05D006085 1.2e-117 427.6 377 65.5
Psat5g144880 Pisum sativum HOM05D004969 ORTHO05D006085 2.1e-117 426.8 456 57.7
Sabra17G0108000 Salix brachista HOM05D004969 ORTHO05D006085 6.1e-117 425.2 409 60.6
FAN03G1223 Fragaria x ananassa HOM05D004969 ORTHO05D006085 8.0e-117 424.9 435 57.7
Sed0015915 Sechium edule HOM05D004969 ORTHO05D006085 1.8e-116 423.7 435 56.3
Carub.0006s1483 Capsella rubella HOM05D004969 ORTHO05D006085 6.8e-116 421.8 477 54.7
Ciclev10011792m.g Citrus clementina HOM05D004969 ORTHO05D006085 3.4e-115 419.5 462 55.2
ATR1136G165 Amborella trichopoda HOM05D004969 ORTHO05D006085 2.4e-113 413.3 369 64.8
Sc23g0001560 Simmondsia chinensis HOM05D004969 ORTHO05D006085 1.2e-112 411.0 455 56.5
Thhalv10013528m.g Eutrema salsugineum HOM05D004969 ORTHO05D006085 3.5e-112 409.5 463 55.9
A10p22590 Brassica napus HOM05D004969 ORTHO05D006085 6.6e-111 405.2 483 54.2
BraA10t44321Z Brassica rapa HOM05D004969 ORTHO05D006085 6.6e-111 405.2 483 54.2
BolC2t06766H Brassica oleracea HOM05D004969 ORTHO05D006085 4.7e-109 399.1 475 52.8
Sp6g27550 Schrenkiella parvula HOM05D004969 ORTHO05D006085 4.7e-109 399.1 466 54.5
BraA02t05337Z Brassica rapa HOM05D004969 ORTHO05D006085 1.8e-108 397.1 470 54.0
HPP92_004464 Vanilla planifolia HOM05D004969 ORTHO05D006085 2.3e-108 396.7 456 54.6
THA.LOC104827189 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 6.8e-108 395.2 479 50.1
Gohir.D07G082700 Gossypium hirsutum HOM05D004969 ORTHO05D006085 3.7e-106 389.4 319 67.7
Hma1.2p1_0342F.1_g130660 Hydrangea macrophylla HOM05D004969 ORTHO05D006085 8.3e-106 388.3 323 69.3
DCAR_014392 Daucus carota HOM05D004969 ORTHO05D006085 5.4e-105 385.6 384 59.1
BolC9t58883H Brassica oleracea HOM05D004969 ORTHO05D006085 7.8e-104 381.7 480 51.9
BcaB08g36833 Brassica carinata HOM05D004969 ORTHO05D006085 4.3e-102 375.9 481 51.1
vmacro00973 Vaccinium macrocarpon HOM05D004969 ORTHO05D006085 8.0e-101 371.7 652 42.2
C09p60500 Brassica napus HOM05D004969 ORTHO05D006085 1.8e-100 370.5 482 51.2
ClCG01G008270 Citrullus lanatus HOM05D004969 ORTHO05D006085 3.1e-100 369.8 417 54.2
THA.LOC104802933 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 1.2e-99 367.9 463 50.5
BcaC03g18507 Brassica carinata HOM05D006375 ORTHO05D008188 5.8e-99 365.5 445 53.7
A02p03690 Brassica napus HOM05D006375 ORTHO05D008188 7.5e-99 365.2 461 52.1
C02p08510 Brassica napus HOM05D006375 ORTHO05D008188 4.9e-98 362.5 454 53.1
HPP92_004490 Vanilla planifolia HOM05D004969 ORTHO05D006085 1.4e-97 360.9 470 51.5
CiPaw.05G038800 Carya illinoinensis HOM05D004969 ORTHO05D006085 4.1e-97 359.4 394 56.9
MSTRG.1535 Avicennia marina HOM05D004969 ORTHO05D006085 5.4e-97 359.0 455 49.7
AT5G16620 Arabidopsis thaliana HOM05D004969 ORTHO05D006085 9.2e-97 358.2 461 51.2
AL6G27590 Arabidopsis lyrata HOM05D004969 ORTHO05D006085 2.1e-96 357.1 461 51.2
Os04g0439900 Oryza sativa ssp. japonica HOM05D004969 ORTHO05D006085 2.7e-96 356.7 385 54.3
FAN06G2886 Fragaria x ananassa HOM05D004969 ORTHO05D006085 4.6e-96 355.9 392 55.9
FAN10G2597 Fragaria x ananassa HOM05D004969 ORTHO05D006085 4.6e-96 355.9 392 55.9
PGSC0003DMG400023281 Solanum tuberosum HOM05D004969 ORTHO05D006085 6.6e-95 352.1 306 67.0
arahy.Tifrunner.gnm1.ann1.70N71I Arachis hypogaea HOM05D004969 ORTHO05D006085 1.2e-93 347.8 336 60.7
unitig_8.g3641 Utricularia gibba HOM05D004969 ORTHO05D006085 2.8e-93 346.7 375 58.4
SGA_v2.0_scaffold25G11066 Striga asiatica HOM05D004969 ORTHO05D007712 8.9e-92 341.7 304 65.5
Zm00001eb082230 Zea mays HOM05D004969 ORTHO05D006085 8.9e-92 341.7 386 51.6
Aa31LG11G13030 Aethionema arabicum HOM05D004969 ORTHO05D006085 1.4e-89 334.3 469 49.9
Atru.chr1.1922 Acer truncatum HOM05D004969 ORTHO05D006085 1.6e-88 330.9 320 60.6
SEGI_27085 Sequoiadendron giganteum HOM05D004969 ORTHO05D006085 1.6e-88 330.9 365 54.5
Hund27125 Selenicereus undatus HOM05D004969 ORTHO05D006085 8.6e-87 325.1 599 40.6
Hund27130 Selenicereus undatus HOM05D004969 ORTHO05D006085 8.6e-87 325.1 599 40.6
Oeu064082.1 Olea europaea HOM05D004969 ORTHO05D006085 3.3e-86 323.2 312 60.6
CARHR196580 Cardamine hirsuta HOM05D004969 ORTHO05D006085 1.1e-84 318.2 328 58.2
Mapoly0007s0079 Marchantia polymorpha HOM05D004969 ORTHO05D006085 2.0e-83 313.9 400 52.2
CDE07G1303 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 5.8e-83 312.4 318 57.5
Pp3c4_25740 Physcomitrium patens HOM05D004969 ORTHO05D006085 3.5e-80 303.1 363 53.2
QL11p019695 Quercus lobata HOM05D004969 ORTHO05D006085 5.1e-79 299.3 496 42.1
Pp3c26_4000 Physcomitrium patens HOM05D004969 ORTHO05D006085 4.0e-76 289.7 370 51.6
Zm00001eb422870 Zea mays HOM05D004969 ORTHO05D006085 5.3e-76 289.3 452 45.1
AUR62023559 Chenopodium quinoa HOM05D004969 ORTHO05D006085 4.9e-74 282.7 461 45.6
arahy.Tifrunner.gnm1.ann1.247CUK Arachis hypogaea HOM05D004969 ORTHO05D006085 8.4e-74 282.0 319 57.1
Sabra04G0058000 Salix brachista HOM05D004969 ORTHO05D006085 3.3e-70 270.0 214 67.3
AagrBONN_evm.TU.Sc2ySwM_362.1764 Anthoceros agrestis HOM05D004969 ORTHO05D006085 6.9e-68 262.3 371 49.6
SMO367G0370 Selaginella moellendorffii HOM05D004969 ORTHO05D006085 4.6e-64 249.6 387 44.7
Hund16770 Selenicereus undatus HOM05D004969 ORTHO05D006085 1.0e-63 248.4 202 63.4
TPR.G37348 Trifolium pratense HOM05D004969 ORTHO05D006085 3.4e-59 233.4 355 50.1
CBR_g49427 Chara braunii HOM05D004969 ORTHO05D006085 1.4e-57 228.0 327 47.4
HanXRQChr02g0036751 Helianthus annuus HOM05D004969 ORTHO05D006085 3.5e-56 223.4 289 47.4
MBI06_g45016_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 7.9e-56 222.2 328 50.0
Gohir.A07G173560 Gossypium hirsutum HOM05D004969 ORTHO05D006085 5.3e-52 209.5 116 90.5
HanXRQChr02g0036561 Helianthus annuus HOM05D004969 ORTHO05D006085 2.0e-51 207.6 456 38.2
TPR.G14671 Trifolium pratense HOM05D004969 ORTHO05D006085 3.7e-45 186.8 99 88.9
FAN01G1532 Fragaria x ananassa HOM05D004969 ORTHO05D006085 7.7e-43 179.1 287 44.3
EL10Ac1g00146 Beta vulgaris HOM05D004969 ORTHO05D006085 7.2e-41 172.6 401 39.4
Cre12.g508000 Chlamydomonas reinhardtii HOM05D004969 ORTHO05D006085 1.2e-35 155.2 161 46.6
Sabra04G0057900 Salix brachista HOM05D004969 ORTHO05D006085 2.6e-35 154.1 265 44.2
Hund31138 Selenicereus undatus HOM05D004969 ORTHO05D006085 7.9e-32 142.5 282 39.4
THA.LOC104802935 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 1.0e-31 142.1 335 38.2
Hund16636 Selenicereus undatus HOM05D004969 ORTHO05D006085 5.7e-30 136.3 282 38.3
CDE07G1829 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 1.1e-28 132.1 67 97.0
FvH4_2g09382 Fragaria vesca HOM05D004969 ORTHO05D006085 4.5e-27 126.7 157 48.4
MCO11G221 Micromonas commoda HOM05D004969 ORTHO05D006085 1.9e-25 121.3 347 33.4
FAN15G1524 Fragaria x ananassa HOM05D004969 ORTHO05D006085 6.1e-24 116.3 74 81.1
MELO3C025953.2 Cucumis melo HOM05D004969 ORTHO05D006085 4.8e-21 106.7 64 79.7
Oeu000537.1 Olea europaea HOM05D004969 ORTHO05D006085 1.8e-20 104.8 69 78.3
AUR62004590 Chenopodium quinoa HOM05D004969 ORTHO05D006085 1.7e-18 98.2 198 40.9
MD02G1236200 Malus domestica HOM05D005192 ORTHO05D006023 1.8e-15 88.2 94 52.1
FvH4_2g09383 Fragaria vesca HOM05D004969 ORTHO05D006085 1.2e-14 85.5 46 84.8
Hund14746 Selenicereus undatus HOM05D004969 ORTHO05D006085 9.7e-14 82.4 51 72.5
CARHR196590 Cardamine hirsuta HOM05D004969 ORTHO05D006085 4.1e-12 77.0 145 41.4
Haze_10772 Corylus avellana HOM05D004969 ORTHO05D006085 7.0e-12 76.3 105 49.5
Gohir.A07G173840 Gossypium hirsutum HOM05D004969 ORTHO05D006085 7.7e-11 72.8 157 38.2
HPP92_017745 Vanilla planifolia HOM05D004969 ORTHO05D006085 1.7e-10 71.6 83 49.4
SHI30104 Sapria himalayana HOM05D007291 ORTHO05D009038 2.9e-10 70.9 65 49.2
Cre12.g490650 Chlamydomonas reinhardtii HOM05D004969 ORTHO05D006085 2.5e-09 67.8 138 26.8
MELO3C033346.2 Cucumis melo HOM05D004969 ORTHO05D044988 2.7e-08 64.3 52 65.4


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