Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003532 Camellia sinensis var. sinensis HOM05D025609 ORTHO05D112093 1.8e-184 649.0 307 100.0
CSS0026068 Camellia sinensis var. sinensis HOM05D025609 ORTHO05D110370 3.9e-168 594.7 313 93.3
CSS0002837 Camellia sinensis var. sinensis HOM05D000367 ORTHO05D002159 1.4e-27 127.9 126 54.8
CSS0037208 Camellia sinensis var. sinensis HOM05D000367 ORTHO05D002159 3.0e-27 126.7 122 56.6
CSS0041953 Camellia sinensis var. sinensis HOM05D000367 ORTHO05D002159 5.7e-26 122.5 126 53.2
Actinidia20687 Actinidia chinensis HOM05D000367 ORTHO05D002159 5.9e-23 112.5 126 48.4
Actinidia28305 Actinidia chinensis HOM05D000367 ORTHO05D002159 1.3e-22 111.3 120 50.0
Hma1.2p1_1011F.1_g247465 Hydrangea macrophylla HOM05D000367 ORTHO05D002159 2.4e-16 90.5 120 44.2
vmacro21169 Vaccinium macrocarpon HOM05D000367 ORTHO05D002159 3.2e-16 90.1 129 43.4
Dinv43905 Davidia involucrata HOM05D000367 ORTHO05D002159 7.0e-16 89.0 125 46.4
vmacro01203 Vaccinium macrocarpon HOM05D000367 ORTHO05D002159 1.6e-15 87.8 134 45.5
CSS0050221 Camellia sinensis var. sinensis HOM05D000367 ORTHO05D002159 1.3e-14 84.7 122 43.4
vmacro13646 Vaccinium macrocarpon HOM05D000367 ORTHO05D002159 1.3e-14 84.7 51 74.5
Nn4g26001 Nelumbo nucifera HOM05D000367 ORTHO05D002159 1.7e-14 84.3 120 40.0
MSTRG.20608 Avicennia marina HOM05D000367 ORTHO05D002159 3.9e-14 83.2 125 39.2
Lj7C567T7 Lonicera japonica HOM05D000367 ORTHO05D002159 1.1e-13 81.6 123 41.5
CSS0029625 Camellia sinensis var. sinensis HOM05D000367 ORTHO05D002159 1.5e-13 81.3 48 81.2
CSS0041280 Camellia sinensis var. sinensis HOM05D000367 ORTHO05D002159 1.5e-13 81.3 48 81.2
Ciclev10031530m.g Citrus clementina HOM05D000367 ORTHO05D002159 1.9e-13 80.9 121 42.1
Nn3g21316 Nelumbo nucifera HOM05D000367 ORTHO05D002159 2.5e-13 80.5 123 39.8
Migut.N01486 Erythranthe guttata HOM05D000367 ORTHO05D002159 5.6e-13 79.3 125 41.6
SGA_v2.0_scaffold4G02249 Striga asiatica HOM05D000367 ORTHO05D002159 1.2e-12 78.2 125 36.8
Atru.chr11.2630 Acer truncatum HOM05D000367 ORTHO05D002159 1.6e-12 77.8 121 38.8
Nitab4.5_0001542g0110 Nicotiana tabacum HOM05D000367 ORTHO05D002159 1.6e-12 77.8 130 37.7
HPP92_008358 Vanilla planifolia HOM05D000367 ORTHO05D002159 1.6e-12 77.8 121 37.2
CSS0030664 Camellia sinensis var. sinensis HOM05D025609 ORTHO05D112493 2.1e-12 77.4 36 88.9
CSS0049232 Camellia sinensis var. sinensis HOM05D025609 ORTHO05D109778 2.1e-12 77.4 36 88.9
CAN.G1393.19 Capsicum annuum HOM05D000367 ORTHO05D002159 2.1e-12 77.4 130 37.7
Migut.B01341 Erythranthe guttata HOM05D000367 ORTHO05D002159 2.8e-12 77.0 125 36.0
Nitab4.5_0004883g0010 Nicotiana tabacum HOM05D000367 ORTHO05D002159 2.8e-12 77.0 130 36.9
Lsat_1_v5_gn_7_36181 Lactuca sativa HOM05D000367 ORTHO05D002159 3.6e-12 76.6 122 41.0
PGSC0003DMG400025245 Solanum tuberosum HOM05D000367 ORTHO05D002159 3.6e-12 76.6 124 37.9
Manes.07G003050 Manihot esculenta HOM05D000367 ORTHO05D002159 6.2e-12 75.9 124 38.7
ECA234G3345 Erigeron canadensis HOM05D000367 ORTHO05D002159 8.0e-12 75.5 124 36.3
Manes.10G147900 Manihot esculenta HOM05D000367 ORTHO05D002159 1.0e-11 75.1 123 38.2
Sopen01g033740 Solanum pennellii HOM05D000367 ORTHO05D002159 1.0e-11 75.1 125 36.8
Solyc01g086740.3 Solanum lycopersicum HOM05D000367 ORTHO05D002159 1.4e-11 74.7 124 37.1
HanXRQChr17g0563481 Helianthus annuus HOM05D000367 ORTHO05D002159 1.8e-11 74.3 124 37.1
Hma1.2p1_1745F.1_g300300 Hydrangea macrophylla HOM05D000367 ORTHO05D002159 1.8e-11 74.3 37 89.2
Lsat_1_v5_gn_4_46221 Lactuca sativa HOM05D000367 ORTHO05D002159 1.8e-11 74.3 125 39.2
Cpa.g.sc27.174 Carica papaya HOM05D000367 ORTHO05D002159 3.1e-11 73.6 120 35.8
Cpa.g.sc444.1 Carica papaya HOM05D000367 ORTHO05D002159 5.2e-11 72.8 120 35.8
GSVIVG01032045001 Vitis vinifera HOM05D000367 ORTHO05D002159 5.2e-11 72.8 39 82.1
SHI04061 Sapria himalayana HOM05D000367 ORTHO05D002159 6.8e-11 72.4 123 39.8
Dinv43472 Davidia involucrata HOM05D000367 ORTHO05D002159 8.9e-11 72.0 124 37.9
Glyma.12G239500 Glycine max HOM05D000367 ORTHO05D002159 8.9e-11 72.0 128 37.5
Potri.001G271300 Populus trichocarpa HOM05D000367 ORTHO05D002159 1.2e-10 71.6 44 72.7
Sabra16G0166700 Salix brachista HOM05D000367 ORTHO05D002159 1.2e-10 71.6 44 72.7
THA.LOC104819058 Tarenaya hassleriana HOM05D000367 ORTHO05D002159 1.2e-10 71.6 120 37.5
Rhsim07G0053700 Rhododendron simsii HOM05D000367 ORTHO05D002159 1.5e-10 71.2 38 84.2
PSO541G2823 Papaver somniferum HOM05D000367 ORTHO05D002159 2.0e-10 70.9 124 37.1
Eucgr.G03399 Eucalyptus grandis HOM05D000367 ORTHO05D002159 2.6e-10 70.5 134 37.3
Glyma.09G003500 Glycine max HOM05D000367 ORTHO05D002159 2.6e-10 70.5 128 37.5
Phvul.011G214000 Phaseolus vulgaris HOM05D000367 ORTHO05D002159 2.6e-10 70.5 40 75.0
Sp2g18480 Schrenkiella parvula HOM05D000367 ORTHO05D002159 2.6e-10 70.5 120 35.0
TWI53G1193 Tripterygium wilfordii HOM05D000367 ORTHO05D002159 2.6e-10 70.5 37 78.4
C07p38870 Brassica napus HOM05D000367 ORTHO05D002159 3.4e-10 70.1 121 38.0
BolC7t44406H Brassica oleracea HOM05D000367 ORTHO05D002159 3.4e-10 70.1 121 38.0
Oeu043588.1 Olea europaea HOM05D000367 ORTHO05D002159 3.4e-10 70.1 37 83.8
PSO675G1741 Papaver somniferum HOM05D000367 ORTHO05D002159 4.4e-10 69.7 130 35.4
Potri.009G065500 Populus trichocarpa HOM05D000367 ORTHO05D002159 4.4e-10 69.7 44 70.5
unitig_0.g1374 Utricularia gibba HOM05D000367 ORTHO05D002159 4.4e-10 69.7 125 35.2
Cc02_g27440 Coffea canephora HOM05D000367 ORTHO05D002159 5.8e-10 69.3 41 70.7
Migut.O00892 Erythranthe guttata HOM05D000367 ORTHO05D002159 7.5e-10 68.9 37 81.1
VMungo1127G0263 Vigna mungo HOM05D000367 ORTHO05D002159 7.5e-10 68.9 128 35.9
CDE02G4723 Ceratophyllum demersum HOM05D000367 ORTHO05D002159 9.8e-10 68.6 124 37.1
CARHR258390 Cardamine hirsuta HOM05D000367 ORTHO05D002159 1.3e-09 68.2 120 35.8
Lj3g0008595 Lotus japonicus HOM05D000367 ORTHO05D002159 1.3e-09 68.2 126 34.9
Medtr4g023470 Medicago truncatula HOM05D000367 ORTHO05D002159 1.3e-09 68.2 125 35.2
A06p39400 Brassica napus HOM05D000367 ORTHO05D002159 1.7e-09 67.8 122 36.9
BraA06t26855Z Brassica rapa HOM05D000367 ORTHO05D002159 1.7e-09 67.8 122 36.9
HanXRQChr04g0117371 Helianthus annuus HOM05D000367 ORTHO05D002159 1.7e-09 67.8 121 37.2
SGA_v2.0_scaffold260G45867 Striga asiatica HOM05D000367 ORTHO05D002159 1.7e-09 67.8 39 76.9
BcaC03g17626 Brassica carinata HOM05D000367 ORTHO05D002159 2.2e-09 67.4 121 38.8
A02p37200 Brassica napus HOM05D000367 ORTHO05D002159 2.2e-09 67.4 121 38.8
C02p56230 Brassica napus HOM05D001393 ORTHO05D002159 2.2e-09 67.4 121 38.8
BolC2t11681H Brassica oleracea HOM05D000367 ORTHO05D002159 2.2e-09 67.4 121 38.8
BraA02t08707Z Brassica rapa HOM05D000367 ORTHO05D002159 2.2e-09 67.4 121 38.8
DCAR_029634 Daucus carota HOM05D000367 ORTHO05D002159 2.2e-09 67.4 35 82.9
Lalb_Chr20g0108121 Lupinus albus HOM05D000367 ORTHO05D002159 2.2e-09 67.4 40 72.5
THA.LOC104826668 Tarenaya hassleriana HOM05D000367 ORTHO05D002159 2.2e-09 67.4 37 78.4
AL8G20290 Arabidopsis lyrata HOM05D000367 ORTHO05D002159 2.9e-09 67.0 125 36.8
CANSAT21G1269 Cannabis sativa HOM05D000367 ORTHO05D002159 2.9e-09 67.0 39 71.8
CiPaw.13G002000 Carya illinoinensis HOM05D000367 ORTHO05D002159 2.9e-09 67.0 40 75.0
Haze_03249 Corylus avellana HOM05D000367 ORTHO05D002159 2.9e-09 67.0 40 72.5
Psat5g198600 Pisum sativum HOM05D000367 ORTHO05D002159 2.9e-09 67.0 126 34.9
CARHR184280 Cardamine hirsuta HOM05D000367 ORTHO05D002159 3.7e-09 66.6 120 35.0
SHI46074 Sapria himalayana HOM05D000024 ORTHO05D000006 3.7e-09 66.6 36 77.8
Ca_26435_v3 Cicer arietinum L. HOM05D000367 ORTHO05D002159 4.9e-09 66.2 44 65.9
Lalb_Chr01g0015241 Lupinus albus HOM05D000367 ORTHO05D002159 4.9e-09 66.2 40 70.0
PGR031G3372 Punica granatum HOM05D000367 ORTHO05D002159 4.9e-09 66.2 120 36.7
Hund03677 Selenicereus undatus HOM05D000367 ORTHO05D002159 4.9e-09 66.2 35 82.9
CDE08G0747 Ceratophyllum demersum HOM05D000367 ORTHO05D002159 6.4e-09 65.9 42 71.4
TPR.G9851 Trifolium pratense HOM05D000367 ORTHO05D002159 6.4e-09 65.9 44 63.6
ATR0620G062 Amborella trichopoda HOM05D000367 ORTHO05D002159 8.3e-09 65.5 38 71.1
ATR0810G214 Amborella trichopoda HOM05D000367 ORTHO05D002159 8.3e-09 65.5 38 71.1
Carub.0008s0758 Capsella rubella HOM05D000367 ORTHO05D002159 8.3e-09 65.5 125 36.0
QL04p003543 Quercus lobata HOM05D000367 ORTHO05D002159 8.3e-09 65.5 39 76.9
QL04p004749 Quercus lobata HOM05D000367 ORTHO05D002159 8.3e-09 65.5 39 76.9
TWI73G1149 Tripterygium wilfordii HOM05D000367 ORTHO05D002159 8.3e-09 65.5 124 33.1
arahy.Tifrunner.gnm1.ann1.SY6123 Arachis hypogaea HOM05D000367 ORTHO05D002159 1.1e-08 65.1 40 67.5
arahy.Tifrunner.gnm1.ann1.XHNB7E Arachis hypogaea HOM05D000367 ORTHO05D002159 1.1e-08 65.1 40 67.5
RcHm_v2.0_Chr1g0314781 Rosa chinensis HOM05D000367 ORTHO05D002159 1.1e-08 65.1 39 69.2
Cfa010724 Carpinus fangiana HOM05D000367 ORTHO05D002159 1.4e-08 64.7 40 70.0
MD02G1316500 Malus domestica HOM05D000367 ORTHO05D002159 1.4e-08 64.7 126 33.3
Aa31LG11G7470 Aethionema arabicum HOM05D000367 ORTHO05D002159 1.9e-08 64.3 120 35.0
AT5G48030 Arabidopsis thaliana HOM05D000367 ORTHO05D002159 1.9e-08 64.3 125 36.0
BcaC06g30829 Brassica carinata HOM05D000367 ORTHO05D002159 1.9e-08 64.3 124 36.3
ECA236G3999 Erigeron canadensis HOM05D000367 ORTHO05D002159 2.4e-08 63.9 122 36.1
arahy.Tifrunner.gnm1.ann1.A4UTJD Arachis hypogaea HOM05D000367 ORTHO05D002159 3.2e-08 63.5 40 62.5
Ca_19893_v3 Cicer arietinum L. HOM05D000367 ORTHO05D002159 3.2e-08 63.5 40 67.5
Glyma.15G271500 Glycine max HOM05D000367 ORTHO05D002159 3.2e-08 63.5 126 31.7
Gohir.A08G053500 Gossypium hirsutum HOM05D000367 ORTHO05D002159 3.2e-08 63.5 121 33.9
Gohir.D08G063000 Gossypium hirsutum HOM05D000367 ORTHO05D002159 3.2e-08 63.5 121 33.9
Gorai.004G065200 Gossypium raimondii HOM05D000367 ORTHO05D002159 3.2e-08 63.5 121 33.9
Medtr3g027580 Medicago truncatula HOM05D000367 ORTHO05D002159 3.2e-08 63.5 51 58.8
Sc14g0005160 Simmondsia chinensis HOM05D000367 ORTHO05D002159 3.2e-08 63.5 120 33.3
Zm00001eb269180 Zea mays HOM05D000367 ORTHO05D002159 3.2e-08 63.5 126 35.7
Thhalv10004199m.g Eutrema salsugineum HOM05D000367 ORTHO05D002159 4.1e-08 63.2 45 62.2
Thecc.01G414700 Theobroma cacao HOM05D000367 ORTHO05D002159 4.1e-08 63.2 120 33.3
Duzib133G0442 Durio zibethinus HOM05D000367 ORTHO05D002159 5.4e-08 62.8 37 67.6
Lj3g0011204 Lotus japonicus HOM05D000367 ORTHO05D002159 5.4e-08 62.8 36 75.0
Zm00001eb269190 Zea mays HOM05D000367 ORTHO05D002159 5.4e-08 62.8 127 35.4
Aqoxy5G02083 Aquilegia oxysepala HOM05D000367 ORTHO05D002159 7.0e-08 62.4 36 75.0
EL10Ac3g05078 Beta vulgaris HOM05D000367 ORTHO05D002159 7.0e-08 62.4 35 74.3
BcaB07g30000 Brassica carinata HOM05D000367 ORTHO05D002159 7.0e-08 62.4 36 75.0
Duzib138G0929 Durio zibethinus HOM05D000367 ORTHO05D002159 7.0e-08 62.4 121 32.2
Glyma.08G152100 Glycine max HOM05D000367 ORTHO05D002159 7.0e-08 62.4 126 31.0
Medtr4g023490 Medicago truncatula HOM05D000367 ORTHO05D002159 1.2e-07 61.6 36 72.2
Aqoxy5G02082 Aquilegia oxysepala HOM05D000367 ORTHO05D002159 1.6e-07 61.2 120 34.2
FvH4_7g00600 Fragaria vesca HOM05D000367 ORTHO05D002159 1.6e-07 61.2 39 66.7
Phvul.005G037400 Phaseolus vulgaris HOM05D000367 ORTHO05D002159 1.6e-07 61.2 40 62.5
Prupe.2G007700 Prunus persica HOM05D000367 ORTHO05D002159 1.6e-07 61.2 39 66.7
VMungo1080G1644 Vigna mungo HOM05D000367 ORTHO05D002159 1.6e-07 61.2 40 62.5
PSO384G2829 Papaver somniferum HOM05D000367 ORTHO05D002159 2.0e-07 60.8 36 72.2
unitig_61.g26445 Utricularia gibba HOM05D000367 ORTHO05D002159 2.0e-07 60.8 37 67.6
Os06g0116800 Oryza sativa ssp. japonica HOM05D000367 ORTHO05D002159 2.7e-07 60.5 119 33.6
Sabra09G0048700 Salix brachista HOM05D000367 ORTHO05D002159 2.7e-07 60.5 30 86.7
TPR.G12203 Trifolium pratense HOM05D000009 ORTHO05D002159 2.7e-07 60.5 39 64.1
ClCG09G003900 Citrullus lanatus HOM05D000367 ORTHO05D002159 3.5e-07 60.1 125 28.8
Ah.04g166050 Amaranthus hybridus HOM05D000120 ORTHO05D002159 4.6e-07 59.7 35 68.6
arahy.Tifrunner.gnm1.ann1.U3IRLW Arachis hypogaea HOM05D000367 ORTHO05D002159 4.6e-07 59.7 40 57.5
MELO3C023526.2 Cucumis melo HOM05D000367 ORTHO05D002159 4.6e-07 59.7 128 30.5
PSO339G6027 Papaver somniferum HOM05D000367 ORTHO05D002159 6.0e-07 59.3 37 64.9
CsaV3_7G031320 Cucumis sativus L. HOM05D000367 ORTHO05D002159 1.0e-06 58.5 125 29.6
Sed0023878 Sechium edule HOM05D000367 ORTHO05D002159 1.0e-06 58.5 45 53.3
TAR369G0787 Trochodendron aralioides HOM05D000367 ORTHO05D002159 1.0e-06 58.5 30 86.7
TAR623G0541 Trochodendron aralioides HOM05D000367 ORTHO05D002159 1.0e-06 58.5 30 86.7
AUR62033187 Chenopodium quinoa HOM05D000367 ORTHO05D002159 1.3e-06 58.2 35 71.4
AUR62043122 Chenopodium quinoa HOM05D000367 ORTHO05D002159 1.3e-06 58.2 35 71.4
Psat7g233360 Pisum sativum HOM05D000367 ORTHO05D002159 1.7e-06 57.8 33 75.8
Zm00001eb054940 Zea mays HOM05D006749 ORTHO05D008352 1.7e-06 57.8 41 61.0
Zm00001eb407790 Zea mays HOM05D000367 ORTHO05D002159 5.0e-06 56.2 35 71.4
Aqoxy4G02746 Aquilegia oxysepala HOM05D000367 ORTHO05D002159 8.6e-06 55.5 35 68.6
Lj9A628G60 Lonicera japonica HOM05D000367 ORTHO05D002159 8.6e-06 55.5 30 76.7
SEGI_20977 Sequoiadendron giganteum HOM05D000367 ORTHO05D002159 8.6e-06 55.5 38 60.5


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