Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003517 Camellia sinensis var. sinensis HOM05D000976 ORTHO05D000847 4.1e-56 221.1 107 100.0
CSS0038793 Camellia sinensis var. sinensis HOM05D000976 ORTHO05D000847 4.1e-56 221.1 107 100.0
CSS0038350 Camellia sinensis var. sinensis HOM05D000976 ORTHO05D000847 3.5e-55 218.0 107 99.1
CSS0050151 Camellia sinensis var. sinensis HOM05D000976 ORTHO05D000847 3.5e-55 218.0 107 99.1
CSS0049464 Camellia sinensis var. sinensis HOM05D000976 ORTHO05D000847 9.0e-35 150.2 119 70.6
Dinv14557 Davidia involucrata HOM05D000976 ORTHO05D000847 2.3e-30 135.6 119 62.2
GSVIVG01029902001 Vitis vinifera HOM05D000976 ORTHO05D000847 4.3e-29 131.3 119 59.7
vmacro07621 Vaccinium macrocarpon HOM05D000976 ORTHO05D000847 6.2e-28 127.5 119 58.8
Rhsim03G0044600 Rhododendron simsii HOM05D000976 ORTHO05D000847 2.4e-27 125.6 119 59.7
Hma1.2p1_0823F.1_g224670 Hydrangea macrophylla HOM05D000976 ORTHO05D000847 3.1e-27 125.2 119 59.7
Cfa019881 Carpinus fangiana HOM05D000976 ORTHO05D000847 6.9e-27 124.0 119 58.0
CiPaw.10G124200 Carya illinoinensis HOM05D000976 ORTHO05D000847 1.7e-25 119.4 119 58.8
Prupe.7G026000 Prunus persica HOM05D000976 ORTHO05D000847 2.9e-25 118.6 119 55.5
Cc09_g05540 Coffea canephora HOM05D000976 ORTHO05D000847 6.4e-25 117.5 120 55.0
QL07p016023 Quercus lobata HOM05D000976 ORTHO05D000847 1.1e-24 116.7 120 58.3
TWI32G0779 Tripterygium wilfordii HOM05D000976 ORTHO05D000847 3.2e-24 115.2 120 55.0
Glyma.03G005000 Glycine max HOM05D000976 ORTHO05D000847 5.4e-24 114.4 118 54.2
Oeu044218.1 Olea europaea HOM05D000976 ORTHO05D000847 7.9e-23 110.5 119 52.1
Glyma.19G121000 Glycine max HOM05D000976 ORTHO05D000847 1.0e-22 110.2 118 52.5
MD14G1012400 Malus domestica HOM05D000976 ORTHO05D000847 1.0e-22 110.2 117 54.7
Oeu034907.1 Olea europaea HOM05D000976 ORTHO05D000847 1.0e-22 110.2 125 50.4
TWI34G0389 Tripterygium wilfordii HOM05D000976 ORTHO05D000847 1.0e-22 110.2 118 53.4
MD12G1014800 Malus domestica HOM05D000976 ORTHO05D000847 2.3e-22 109.0 117 53.8
PGR042G3098 Punica granatum HOM05D000976 ORTHO05D000847 3.9e-22 108.2 118 50.8
Thecc.05G236900 Theobroma cacao HOM05D000976 ORTHO05D000847 5.1e-22 107.8 119 52.9
Atru.chr2.1602 Acer truncatum HOM05D000976 ORTHO05D000847 6.7e-22 107.5 119 51.3
Lj2A413T17 Lonicera japonica HOM05D000976 ORTHO05D000847 6.7e-22 107.5 122 50.0
Potri.013G069000 Populus trichocarpa HOM05D000976 ORTHO05D000847 6.7e-22 107.5 119 50.4
Ciclev10032130m.g Citrus clementina HOM05D000976 ORTHO05D000847 1.1e-21 106.7 126 47.6
TAR623G1304 Trochodendron aralioides HOM05D000976 ORTHO05D000847 1.1e-21 106.7 119 52.9
RcHm_v2.0_Chr3g0495561 Rosa chinensis HOM05D000976 ORTHO05D000847 1.5e-21 106.3 120 50.0
Lalb_Chr24g0401221 Lupinus albus HOM05D000976 ORTHO05D000847 1.9e-21 105.9 118 51.7
Phvul.001G103100 Phaseolus vulgaris HOM05D000976 ORTHO05D000847 1.9e-21 105.9 118 50.0
Eucgr.A02161 Eucalyptus grandis HOM05D000976 ORTHO05D000847 4.3e-21 104.8 117 51.3
VMungo1383G3548 Vigna mungo HOM05D000976 ORTHO05D000847 7.4e-21 104.0 118 49.2
Ca_03433_v3 Cicer arietinum L. HOM05D000976 ORTHO05D000847 9.6e-21 103.6 118 50.0
Hund13308 Selenicereus undatus HOM05D000976 ORTHO05D000847 9.6e-21 103.6 120 52.5
FAN28G2590 Fragaria x ananassa HOM05D000976 ORTHO05D000847 1.3e-20 103.2 119 52.1
Lalb_Chr14g0365061 Lupinus albus HOM05D000976 ORTHO05D000847 1.3e-20 103.2 118 50.8
Sabra13G0059900 Salix brachista HOM05D000976 ORTHO05D000847 4.8e-20 101.3 121 48.8
ClCG04G006020 Citrullus lanatus HOM05D000976 ORTHO05D000847 6.2e-20 100.9 119 49.6
Psat3g084600 Pisum sativum HOM05D000976 ORTHO05D000847 6.2e-20 100.9 118 49.2
FvH4_1g29390 Fragaria vesca HOM05D000976 ORTHO05D000847 8.1e-20 100.5 119 51.3
MELO3C019155.2 Cucumis melo HOM05D000976 ORTHO05D000847 1.1e-19 100.1 119 48.7
MBI19_g13595_MAGBIO Magnolia biondii HOM05D000976 ORTHO05D000847 1.1e-19 100.1 123 47.2
CsaV3_4G029090 Cucumis sativus L. HOM05D000976 ORTHO05D000847 1.4e-19 99.8 119 48.7
Duzib177G1033 Durio zibethinus HOM05D000976 ORTHO05D000847 1.4e-19 99.8 119 46.2
Manes.08G155500 Manihot esculenta HOM05D000976 ORTHO05D000847 1.8e-19 99.4 119 48.7
Nitab4.5_0010533g0020 Nicotiana tabacum HOM05D000976 ORTHO05D000847 1.8e-19 99.4 119 47.9
Sc07g0007730 Simmondsia chinensis HOM05D000976 ORTHO05D000847 1.8e-19 99.4 120 48.3
FAN19G3159 Fragaria x ananassa HOM05D000976 ORTHO05D000847 2.4e-19 99.0 119 50.4
FAN26G3358 Fragaria x ananassa HOM05D000976 ORTHO05D000847 2.4e-19 99.0 119 51.3
Lj1g0011034 Lotus japonicus HOM05D000976 ORTHO05D000847 2.4e-19 99.0 118 50.0
Medtr7g087440 Medicago truncatula HOM05D000976 ORTHO05D000847 3.1e-19 98.6 118 46.6
Nitab4.5_0000062g0580 Nicotiana tabacum HOM05D000976 ORTHO05D000847 6.9e-19 97.4 119 46.2
PSO384G1114 Papaver somniferum HOM05D000976 ORTHO05D000847 6.9e-19 97.4 124 47.6
DCAR_013501 Daucus carota HOM05D000976 ORTHO05D000847 2.0e-18 95.9 119 46.2
SalBow1G0965 Salvia bowleyana HOM05D000976 ORTHO05D000847 2.0e-18 95.9 126 43.7
MSTRG.26198 Avicennia marina HOM05D000976 ORTHO05D000847 2.6e-18 95.5 120 45.8
TPR.G20662 Trifolium pratense HOM05D000976 ORTHO05D000847 3.4e-18 95.1 118 45.8
Nn3g19395 Nelumbo nucifera HOM05D000976 ORTHO05D000847 4.5e-18 94.7 119 45.4
COL.COLO4_33465 Corchorus olitorius HOM05D000976 ORTHO05D000847 5.8e-18 94.4 120 45.0
PSO339G5356 Papaver somniferum HOM05D000976 ORTHO05D000847 7.6e-18 94.0 125 45.6
Peaxi162Scf00153g00079 Petunia axillaris HOM05D000976 ORTHO05D000847 7.6e-18 94.0 119 44.5
Duzib106G0936 Durio zibethinus HOM05D000976 ORTHO05D000847 1.7e-17 92.8 119 47.1
Sed0015567 Sechium edule HOM05D000976 ORTHO05D000847 1.7e-17 92.8 120 47.5
THA.LOC104802887 Tarenaya hassleriana HOM05D000976 ORTHO05D000847 2.9e-17 92.0 121 43.8
CAN.G128.117 Capsicum annuum HOM05D000976 ORTHO05D000847 3.8e-17 91.7 119 46.2
PGSC0003DMG400028206 Solanum tuberosum HOM05D000976 ORTHO05D000847 4.9e-17 91.3 119 46.2
Lsat_1_v5_gn_5_154440 Lactuca sativa HOM05D000976 ORTHO05D000847 6.4e-17 90.9 120 42.5
Solyc10g081270.2 Solanum lycopersicum HOM05D000976 ORTHO05D000847 6.4e-17 90.9 119 46.2
arahy.Tifrunner.gnm1.ann1.QWRQ1F Arachis hypogaea HOM05D000976 ORTHO05D000847 2.4e-16 89.0 118 44.9
Sopen10g031770 Solanum pennellii HOM05D000976 ORTHO05D000847 2.4e-16 89.0 119 45.4
Gohir.D13G165300 Gossypium hirsutum HOM05D000976 ORTHO05D000847 3.2e-16 88.6 114 46.5
Gorai.013G197400 Gossypium raimondii HOM05D000976 ORTHO05D000847 3.2e-16 88.6 114 46.5
HanXRQChr13g0406461 Helianthus annuus HOM05D000976 ORTHO05D000847 3.2e-16 88.6 120 43.3
arahy.Tifrunner.gnm1.ann1.2J433J Arachis hypogaea HOM05D000976 ORTHO05D000847 7.1e-16 87.4 118 44.9
Gohir.A13G160100 Gossypium hirsutum HOM05D000976 ORTHO05D000847 3.5e-15 85.1 114 45.6
THA.LOC104820808 Tarenaya hassleriana HOM05D000976 ORTHO05D000847 3.5e-15 85.1 122 41.0
Migut.K00187 Erythranthe guttata HOM05D000976 ORTHO05D000847 1.0e-14 83.6 126 41.3
CANSAT01G0258 Cannabis sativa HOM05D000976 ORTHO05D000847 1.3e-14 83.2 119 44.5
Os03g0322800 Oryza sativa ssp. japonica HOM05D000976 ORTHO05D000847 2.3e-14 82.4 121 41.3
ECA248G1781 Erigeron canadensis HOM05D000976 ORTHO05D000847 3.9e-14 81.6 120 40.8
Aa31LG5G14120 Aethionema arabicum HOM05D000976 ORTHO05D000847 8.7e-14 80.5 129 38.0
AT3G03610 Arabidopsis thaliana HOM05D000976 ORTHO05D000847 8.7e-14 80.5 122 39.3
Carub.0003s0277 Capsella rubella HOM05D000976 ORTHO05D000847 1.5e-13 79.7 122 39.3
Thhalv10021157m.g Eutrema salsugineum HOM05D000976 ORTHO05D000847 9.6e-13 77.0 120 40.8
Gohir.D11G238300 Gossypium hirsutum HOM05D000976 ORTHO05D000847 1.3e-12 76.6 120 40.8
Gorai.007G252300 Gossypium raimondii HOM05D000976 ORTHO05D000847 1.3e-12 76.6 120 40.8
BcaC09g47720 Brassica carinata HOM05D000976 ORTHO05D000847 2.1e-12 75.9 122 39.3
BNapus_Darmor_BZH_scaffold_162p00230 Brassica napus HOM05D000976 ORTHO05D000847 2.1e-12 75.9 122 39.3
BolC1t05823H Brassica oleracea HOM05D000976 ORTHO05D000847 2.1e-12 75.9 122 39.3
Zm00001eb015380 Zea mays HOM05D000976 ORTHO05D000847 2.8e-12 75.5 126 37.3
AL3G13380 Arabidopsis lyrata HOM05D000976 ORTHO05D000847 3.7e-12 75.1 122 39.3
CARHR077650 Cardamine hirsuta HOM05D000976 ORTHO05D000847 6.2e-12 74.3 122 39.3
Dinv37042 Davidia involucrata HOM05D000976 ORTHO05D000847 6.2e-12 74.3 80 53.8
BcaC05g30263 Brassica carinata HOM05D000976 ORTHO05D000847 8.2e-12 73.9 120 39.2
BcaNung05457 Brassica carinata HOM05D000976 ORTHO05D000847 1.1e-11 73.6 122 38.5
Ah.12g062090 Amaranthus hybridus HOM05D000976 ORTHO05D000847 1.8e-11 72.8 115 40.9
unitig_748.g7219 Utricularia gibba HOM05D000976 ORTHO05D000847 1.8e-11 72.8 127 35.4
BraA01t04573Z Brassica rapa HOM05D000976 ORTHO05D000847 3.1e-11 72.0 125 36.8
AUR62036495 Chenopodium quinoa HOM05D000976 ORTHO05D000847 4.0e-11 71.6 118 39.8
AUR62037075 Chenopodium quinoa HOM05D000976 ORTHO05D000847 4.0e-11 71.6 118 39.8
A01p41500 Brassica napus HOM05D000976 ORTHO05D000847 5.3e-11 71.2 123 36.6
BNapus_Darmor_BZH_scaffold_78p00210 Brassica napus HOM05D000976 ORTHO05D000847 5.3e-11 71.2 123 36.6
SGA_v2.0_scaffold240G44155 Striga asiatica HOM05D000976 ORTHO05D000847 1.2e-10 70.1 167 31.7
EL10Ac5g11647 Beta vulgaris HOM05D000976 ORTHO05D000847 2.0e-10 69.3 120 39.2
Manes.09G134700 Manihot esculenta HOM05D000976 ORTHO05D000847 2.6e-10 68.9 121 38.0
SEGI_04579 Sequoiadendron giganteum HOM05D000976 ORTHO05D000847 3.4e-10 68.6 119 35.3
A05p43700 Brassica napus HOM05D000976 ORTHO05D000847 5.8e-10 67.8 120 36.7
BraA05t23109Z Brassica rapa HOM05D000976 ORTHO05D000847 5.8e-10 67.8 120 36.7
C05p63280 Brassica napus HOM05D000976 ORTHO05D000847 1.3e-09 66.6 120 35.8
BolC5t34991H Brassica oleracea HOM05D000976 ORTHO05D000847 1.3e-09 66.6 120 35.8
unitig_0.g2670 Utricularia gibba HOM05D000976 ORTHO05D000847 2.9e-09 65.5 119 37.8
BcaC05g29866 Brassica carinata HOM05D000976 ORTHO05D000847 4.9e-09 64.7 120 35.8
Sp3g02600 Schrenkiella parvula HOM05D000976 ORTHO05D000847 5.5e-08 61.2 92 39.1
Mapoly0037s0066 Marchantia polymorpha HOM05D000976 ORTHO05D000847 2.1e-07 59.3 141 28.4
SMO364G0853 Selaginella moellendorffii HOM05D000976 ORTHO05D000847 4.6e-07 58.2 89 37.1
Aqoxy2G00013 Aquilegia oxysepala HOM05D000976 ORTHO05D000847 1.0e-06 57.0 51 58.8
Sc07g0007760 Simmondsia chinensis HOM05D000976 ORTHO05D000847 1.3e-06 56.6 81 43.2
CDE04G2741 Ceratophyllum demersum HOM05D000976 ORTHO05D000847 3.0e-06 55.5 99 32.3
ATR0307G076 Amborella trichopoda HOM05D000976 ORTHO05D000847 5.1e-06 54.7 152 30.9


User provided reference genes

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