Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003455 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 7.3e-147 523.9 264 100.0
CSS0047872 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 2.5e-118 429.1 274 80.3
Actinidia31918 Actinidia chinensis HOM05D006853 ORTHO05D006634 1.7e-111 406.4 252 83.7
Rhsim09G0117300 Rhododendron simsii HOM05D006853 ORTHO05D008906 1.8e-105 386.3 272 73.5
Lj6P771T55 Lonicera japonica HOM05D006853 ORTHO05D008906 5.9e-104 381.3 265 72.1
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 2.2e-103 379.4 266 73.7
Nitab4.5_0000027g0460 Nicotiana tabacum HOM05D006853 ORTHO05D008906 8.0e-101 370.9 272 71.3
Haze_23238 Corylus avellana HOM05D006853 ORTHO05D008906 1.4e-100 370.2 272 67.3
QL03p047845 Quercus lobata HOM05D006853 ORTHO05D008906 2.6e-99 365.9 267 70.0
CAN.G184.17 Capsicum annuum HOM05D006853 ORTHO05D008906 5.7e-99 364.8 266 71.8
CiPaw.06G096100 Carya illinoinensis HOM05D006853 ORTHO05D008906 9.7e-99 364.0 273 68.1
Nitab4.5_0010998g0020 Nicotiana tabacum HOM05D006853 ORTHO05D008906 9.7e-99 364.0 272 70.2
Atru.chr11.1459 Acer truncatum HOM05D006853 ORTHO05D008906 8.2e-98 360.9 266 69.2
Atru.chr11.1493 Acer truncatum HOM05D006853 ORTHO05D008906 8.2e-98 360.9 266 69.2
Manes.06G077700 Manihot esculenta HOM05D006853 ORTHO05D008906 1.1e-97 360.5 272 66.5
PGSC0003DMG400025119 Solanum tuberosum HOM05D006853 ORTHO05D008906 1.4e-97 360.1 272 68.8
Potri.010G134600 Populus trichocarpa HOM05D006853 ORTHO05D008906 5.3e-97 358.2 273 65.6
Sopen05g006060 Solanum pennellii HOM05D006853 ORTHO05D008906 5.3e-97 358.2 272 68.4
Ciclev10032464m.g Citrus clementina HOM05D006853 ORTHO05D008906 1.2e-96 357.1 266 69.2
Thecc.02G317700 Theobroma cacao HOM05D006853 ORTHO05D008906 2.0e-96 356.3 272 65.8
Solyc05g010290.3 Solanum lycopersicum HOM05D006853 ORTHO05D008906 2.7e-96 355.9 272 68.0
Peaxi162Scf00188g00063 Petunia axillaris HOM05D006853 ORTHO05D008906 4.5e-96 355.1 272 68.4
Duzib268G1722 Durio zibethinus HOM05D006853 ORTHO05D008906 8.5e-95 350.9 275 65.5
Cc11_g11200 Coffea canephora HOM05D006853 ORTHO05D008906 1.1e-94 350.5 267 70.4
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 1.9e-94 349.7 249 69.9
Cpa.g.sc53.10 Carica papaya HOM05D006853 ORTHO05D008906 2.5e-94 349.4 272 64.3
COL.COLO4_27747 Corchorus olitorius HOM05D006853 ORTHO05D008906 3.2e-94 349.0 272 64.7
MSTRG.7709 Avicennia marina HOM05D006853 ORTHO05D008906 7.2e-94 347.8 270 64.8
Oeu024136.2 Olea europaea HOM05D006853 ORTHO05D008906 9.4e-94 347.4 269 66.9
TAR624G1108 Trochodendron aralioides HOM05D006853 ORTHO05D008906 1.6e-93 346.7 266 69.9
Gohir.D02G132900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 3.6e-93 345.5 272 63.2
Sabra10G0103400 Salix brachista HOM05D006853 ORTHO05D008906 3.6e-93 345.5 273 64.1
Gohir.A03G107900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 1.0e-92 344.0 272 62.9
SalBow8G0220 Salvia bowleyana HOM05D006853 ORTHO05D008906 6.8e-92 341.3 269 64.3
Oeu054577.1 Olea europaea HOM05D006853 ORTHO05D008906 5.7e-91 338.2 270 65.2
SalBow8G1387 Salvia bowleyana HOM05D006853 ORTHO05D008906 5.7e-91 338.2 269 63.9
CANSAT64G2393 Cannabis sativa HOM05D006853 ORTHO05D008906 2.2e-90 336.3 268 64.9
HanXRQChr08g0214781 Helianthus annuus HOM05D006853 ORTHO05D008906 4.8e-90 335.1 265 64.2
Sc11g0002760 Simmondsia chinensis HOM05D006853 ORTHO05D008906 8.3e-90 334.3 272 65.4
Oeu054573.1 Olea europaea HOM05D006853 ORTHO05D008906 7.0e-89 331.3 270 64.4
Oeu054575.1 Olea europaea HOM05D006853 ORTHO05D008906 7.0e-89 331.3 270 64.4
TWI31G0390 Tripterygium wilfordii HOM05D006853 ORTHO05D008906 7.0e-89 331.3 252 67.1
Sed0015072 Sechium edule HOM05D006853 ORTHO05D008906 7.7e-88 327.8 274 61.7
Potri.008G110700 Populus trichocarpa HOM05D006853 ORTHO05D008906 8.5e-87 324.3 273 62.3
Lsat_1_v5_gn_8_37640 Lactuca sativa HOM05D006853 ORTHO05D008906 1.5e-86 323.6 265 64.2
Eucgr.B03092 Eucalyptus grandis HOM05D006853 ORTHO05D008906 2.1e-85 319.7 272 59.9
Migut.L01132 Erythranthe guttata HOM05D006853 ORTHO05D006634 4.7e-85 318.5 249 64.3
Dinv16569 Davidia involucrata HOM05D000044 ORTHO05D006634 1.8e-84 316.6 214 75.7
ClCG01G007410 Citrullus lanatus HOM05D006853 ORTHO05D008906 2.3e-84 316.2 274 60.6
PGR102G0342 Punica granatum HOM05D006853 ORTHO05D008906 1.2e-83 313.9 272 59.2
Aa31LG2G6790 Aethionema arabicum HOM05D006853 ORTHO05D008906 2.0e-83 313.2 273 59.0
Carub.0005s0328 Capsella rubella HOM05D006853 ORTHO05D008906 2.0e-83 313.2 267 61.0
Thhalv10004778m.g Eutrema salsugineum HOM05D006853 ORTHO05D008906 2.0e-83 313.2 266 60.5
PSO541G5551 Papaver somniferum HOM05D006853 ORTHO05D008906 2.6e-83 312.8 267 62.5
MELO3C005171.2 Cucumis melo HOM05D006853 ORTHO05D008906 3.4e-83 312.4 253 64.0
Hund25134 Selenicereus undatus HOM05D006853 ORTHO05D008906 3.4e-83 312.4 270 60.7
ECA233G2927 Erigeron canadensis HOM05D006853 ORTHO05D006634 4.4e-83 312.0 244 62.7
Sp2g14810 Schrenkiella parvula HOM05D006853 ORTHO05D008906 4.4e-83 312.0 266 60.5
MD13G1053100 Malus domestica HOM05D006853 ORTHO05D008906 9.8e-83 310.8 272 62.5
AL5G14010 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 1.3e-82 310.5 269 60.2
CsaV3_5G018880 Cucumis sativus L. HOM05D006853 ORTHO05D008906 3.7e-82 308.9 234 67.1
AT3G25545 Arabidopsis thaliana HOM05D006853 ORTHO05D008906 8.3e-82 307.8 269 59.9
Prupe.1G299000 Prunus persica HOM05D006853 ORTHO05D006634 1.8e-81 306.6 232 69.4
MD16G1052100 Malus domestica HOM05D006853 ORTHO05D008906 5.4e-81 305.1 272 61.8
PSO675G5986 Papaver somniferum HOM05D006853 ORTHO05D008906 5.4e-81 305.1 267 61.8
BcaB07g30639 Brassica carinata HOM05D006853 ORTHO05D008906 7.0e-81 304.7 268 59.0
BcaB07g30269 Brassica carinata HOM05D006853 ORTHO05D008906 9.2e-81 304.3 267 59.6
BcaC03g17267 Brassica carinata HOM05D006853 ORTHO05D008906 9.2e-81 304.3 270 60.0
BcaC03g17268 Brassica carinata HOM05D006853 ORTHO05D008906 9.2e-81 304.3 270 60.0
AUR62007823 Chenopodium quinoa HOM05D006853 ORTHO05D008906 9.2e-81 304.3 272 57.4
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 1.6e-80 303.5 198 78.3
C02p52120 Brassica napus HOM05D006853 ORTHO05D008906 2.7e-80 302.8 272 58.8
BolC2t11296H Brassica oleracea HOM05D006853 ORTHO05D008906 2.7e-80 302.8 272 58.8
THA.LOC104801842 Tarenaya hassleriana HOM05D006853 ORTHO05D008906 2.7e-80 302.8 272 58.5
Ah.02g127470 Amaranthus hybridus HOM05D001046 ORTHO05D002934 7.7e-80 301.2 248 62.9
FvH4_4g28700 Fragaria vesca HOM05D006853 ORTHO05D008906 4.3e-78 295.4 270 59.3
CARHR146460 Cardamine hirsuta HOM05D006853 ORTHO05D008906 1.2e-77 293.9 268 58.6
FAN12G0570 Fragaria x ananassa HOM05D006853 ORTHO05D008906 2.1e-77 293.1 270 58.5
RcHm_v2.0_Chr4g0436821 Rosa chinensis HOM05D006853 ORTHO05D008906 4.7e-77 292.0 266 58.3
SGA_v2.0_scaffold16G07849 Striga asiatica HOM05D006853 ORTHO05D008906 5.2e-76 288.5 267 58.1
FAN07G1226 Fragaria x ananassa HOM05D006853 ORTHO05D006634 8.3e-74 281.2 247 60.3
HanXRQChr15g0469081 Helianthus annuus HOM05D006853 ORTHO05D008906 8.3e-74 281.2 212 65.1
Nn7g37287 Nelumbo nucifera HOM05D006853 ORTHO05D008906 1.6e-72 276.9 267 59.2
A02p33840 Brassica napus HOM05D006853 ORTHO05D008906 1.0e-71 274.2 271 55.7
BraA02t08402Z Brassica rapa HOM05D006853 ORTHO05D008906 1.7e-71 273.5 271 55.7
unitig_8.g3212 Utricularia gibba HOM05D006853 ORTHO05D008906 5.0e-63 245.4 249 55.0
Aqoxy5G01341 Aquilegia oxysepala HOM05D006853 ORTHO05D008906 1.5e-62 243.8 230 60.0
SHI15728 Sapria himalayana HOM05D006853 ORTHO05D008906 3.6e-61 239.2 267 51.3
Ca_05156_v3 Cicer arietinum L. HOM05D006853 ORTHO05D008906 4.9e-58 228.8 268 48.1
Medtr5g049260 Medicago truncatula HOM05D006853 ORTHO05D008906 2.7e-56 223.0 268 49.3
Medtr5g049270 Medicago truncatula HOM05D006853 ORTHO05D008906 2.7e-56 223.0 268 49.3
ATR0721G025 Amborella trichopoda HOM05D006853 ORTHO05D008906 4.6e-56 222.2 273 46.5
Hma1.2p1_0125F.1_g058490 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 6.6e-55 218.4 155 72.9
Glyma.02G127200 Glycine max HOM05D006853 ORTHO05D008906 3.3e-54 216.1 269 48.3
GSVIVG01010168001 Vitis vinifera HOM05D000044 ORTHO05D006634 1.2e-53 214.2 238 52.1
VMungo1215G2951 Vigna mungo HOM05D006853 ORTHO05D008906 2.8e-53 213.0 266 45.1
Glyma.01G070150 Glycine max HOM05D006853 ORTHO05D008906 6.2e-53 211.8 269 48.7
Lalb_Chr17g0341651 Lupinus albus HOM05D006853 ORTHO05D008906 5.8e-51 205.3 267 46.1
HPP92_020023 Vanilla planifolia HOM05D006853 ORTHO05D008906 3.2e-49 199.5 230 52.6
Lj2g0007836 Lotus japonicus HOM05D000044 ORTHO05D006634 5.4e-49 198.7 258 44.2
Phvul.002G082000 Phaseolus vulgaris HOM05D006853 ORTHO05D008906 1.2e-48 197.6 266 42.9
SEGI_13208 Sequoiadendron giganteum HOM05D006853 ORTHO05D008906 6.6e-47 191.8 268 44.0
C09p31840 Brassica napus HOM05D006853 ORTHO05D008906 1.6e-45 187.2 195 51.8
BcaC04g21430 Brassica carinata HOM05D006853 ORTHO05D008906 3.6e-45 186.0 195 51.3
arahy.Tifrunner.gnm1.ann1.N8UYM2 Arachis hypogaea HOM05D006853 ORTHO05D008906 2.0e-43 180.3 269 42.4
arahy.Tifrunner.gnm1.ann1.QR8D6Y Arachis hypogaea HOM05D006853 ORTHO05D008906 2.1e-40 170.2 241 43.2
Pp3c1_39830 Physcomitrium patens HOM05D006853 ORTHO05D008906 3.2e-33 146.4 232 39.7
HanXRQChr12g0364531 Helianthus annuus HOM05D006853 ORTHO05D008906 1.3e-29 134.4 103 69.9
CDE03G0412 Ceratophyllum demersum HOM05D001926 ORTHO05D002121 1.4e-28 131.0 151 48.3
SMO164G0046 Selaginella moellendorffii HOM05D006853 ORTHO05D008906 1.2e-27 127.9 237 37.6
Os01g0219000 Oryza sativa ssp. japonica HOM05D006853 ORTHO05D008906 1.1e-25 121.3 218 41.7
AagrBONN_evm.TU.Sc2ySwM_368.2648 Anthoceros agrestis HOM05D006853 ORTHO05D008906 4.2e-25 119.4 242 36.8
AL5G13960 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 1.6e-24 117.5 93 63.4
Psat2g098640 Pisum sativum HOM05D006853 ORTHO05D008906 5.6e-22 109.0 118 49.2
Zm00001eb119820 Zea mays HOM05D006853 ORTHO05D008906 1.6e-21 107.5 216 38.4
Mapoly0008s0082 Marchantia polymorpha HOM05D006853 ORTHO05D008906 3.7e-21 106.3 245 33.1
ATR0737G064 Amborella trichopoda HOM05D006853 ORTHO05D008906 9.0e-20 101.7 103 50.5
Psat1g127240 Pisum sativum HOM05D002500 ORTHO05D002587 6.5e-18 95.5 82 58.5
GSVIVG01017445001 Vitis vinifera HOM05D000518 ORTHO05D001974 2.4e-12 77.0 62 58.1
Cre01.g037650 Chlamydomonas reinhardtii HOM05D006853 ORTHO05D008906 4.1e-12 76.3 169 32.0
PSO478G3347 Papaver somniferum HOM05D006853 ORTHO05D008906 2.6e-11 73.6 49 65.3


User provided reference genes

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