Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003449 Camellia sinensis var. sinensis HOM05D009245 ORTHO05D011414 8.9e-43 176.4 82 100.0
Dinv10969 Davidia involucrata HOM05D009245 ORTHO05D011414 1.6e-28 129.0 85 75.3
CSS0013160 Camellia sinensis var. sinensis HOM05D009245 ORTHO05D011414 2.8e-28 128.3 85 75.3
CSS0041114 Camellia sinensis var. sinensis HOM05D009245 ORTHO05D011414 2.8e-28 128.3 85 75.3
Actinidia20700 Actinidia chinensis HOM05D009245 ORTHO05D011414 2.8e-20 101.7 83 63.9
GSVIVG01010444001 Vitis vinifera HOM05D009245 ORTHO05D011414 3.7e-20 101.3 84 61.9
CiPaw.06G101300 Carya illinoinensis HOM05D009245 ORTHO05D011414 2.6e-18 95.1 84 61.9
CiPaw.05G111800 Carya illinoinensis HOM05D009245 ORTHO05D011414 7.6e-18 93.6 82 57.3
Glyma.11G249400 Glycine max HOM05D009245 ORTHO05D011414 4.9e-17 90.9 85 58.8
Glyma.08G103500 Glycine max HOM05D009245 ORTHO05D011414 8.4e-17 90.1 85 55.3
Manes.12G012951 Manihot esculenta HOM05D009245 ORTHO05D011414 1.4e-16 89.4 85 55.3
Cc11_g16810 Coffea canephora HOM05D009245 ORTHO05D011414 5.5e-16 87.4 86 58.1
arahy.Tifrunner.gnm1.ann1.6N96FM Arachis hypogaea HOM05D009245 ORTHO05D011414 7.1e-16 87.0 84 52.4
Glyma.18G008000 Glycine max HOM05D009245 ORTHO05D011414 1.8e-14 82.4 73 61.6
Gohir.A01G155200 Gossypium hirsutum HOM05D009245 ORTHO05D011414 1.8e-14 82.4 82 52.4
Prupe.1G228500 Prunus persica HOM05D009245 ORTHO05D011414 1.8e-14 82.4 79 57.0
Atru.chr11.2306 Acer truncatum HOM05D009245 ORTHO05D011414 1.1e-13 79.7 82 53.7
ClCG08G010130 Citrullus lanatus HOM05D009245 ORTHO05D011414 1.1e-13 79.7 45 77.8
Migut.K00714 Erythranthe guttata HOM05D009245 ORTHO05D011414 1.1e-13 79.7 85 50.6
Gohir.D01G154750 Gossypium hirsutum HOM05D009245 ORTHO05D011414 1.1e-13 79.7 82 51.2
Thecc.02G212200 Theobroma cacao HOM05D009245 ORTHO05D011414 1.1e-13 79.7 85 50.6
Phvul.001G260700 Phaseolus vulgaris HOM05D009245 ORTHO05D011414 1.5e-13 79.3 85 51.8
Potri.013G104350 Populus trichocarpa HOM05D009245 ORTHO05D011414 1.3e-12 76.3 61 62.3
CsaV3_6G032310 Cucumis sativus L. HOM05D009245 ORTHO05D011414 1.6e-12 75.9 60 61.7
EL10Ac6g13482 Beta vulgaris HOM05D009245 ORTHO05D011414 6.2e-12 73.9 84 48.8
Manes.13G018350 Manihot esculenta HOM05D009245 ORTHO05D011414 1.1e-11 73.2 82 47.6
Phvul.002G174500 Phaseolus vulgaris HOM05D009245 ORTHO05D011414 1.1e-11 73.2 48 66.7
Lalb_Chr11g0075731 Lupinus albus HOM05D009245 ORTHO05D011414 5.3e-11 70.9 76 48.7
Lj4g0004409 Lotus japonicus HOM05D009245 ORTHO05D011414 6.9e-11 70.5 48 64.6
Potri.008G175950 Populus trichocarpa HOM05D009245 ORTHO05D011414 4.5e-10 67.8 82 47.6
TAR629G3142 Trochodendron aralioides HOM05D009245 ORTHO05D011414 3.8e-09 64.7 81 46.9
CAN.G550.3 Capsicum annuum HOM05D009245 ORTHO05D011414 1.1e-08 63.2 79 45.6
Psat5g094920 Pisum sativum HOM05D000667 ORTHO05D003843 1.4e-08 62.8 73 49.3


User provided reference genes

Program Settings