Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003445 Camellia sinensis var. sinensis HOM05D001304 ORTHO05D007800 6.5e-143 510.8 266 100.0
CSS0009053 Camellia sinensis var. sinensis HOM05D001304 ORTHO05D007800 5.3e-121 438.0 272 87.1
CSS0031471 Camellia sinensis var. sinensis HOM05D001304 ORTHO05D007800 1.3e-114 416.8 291 79.4
Rhsim12G0036000 Rhododendron simsii HOM05D001304 ORTHO05D007800 1.4e-92 343.6 282 67.7
Dinv11004 Davidia involucrata HOM05D001304 ORTHO05D007800 1.2e-91 340.5 286 68.2
Migut.K00684 Erythranthe guttata HOM05D001304 ORTHO05D007800 7.3e-86 321.2 284 62.3
Lj6C820G6 Lonicera japonica HOM05D001304 ORTHO05D007800 6.8e-84 314.7 285 63.5
Ciclev10033657m.g Citrus clementina HOM05D001304 ORTHO05D007800 9.9e-83 310.8 283 62.5
Prupe.1G234500 Prunus persica HOM05D001304 ORTHO05D007800 2.9e-82 309.3 286 61.5
MSTRG.532 Avicennia marina HOM05D001304 ORTHO05D007800 1.2e-80 303.9 285 60.4
TAR629G3532 Trochodendron aralioides HOM05D001304 ORTHO05D007800 1.6e-80 303.5 279 61.6
Manes.12G016550 Manihot esculenta HOM05D001304 ORTHO05D007800 2.7e-80 302.8 281 59.8
SalBow2G1645 Salvia bowleyana HOM05D001304 ORTHO05D007800 6.0e-80 301.6 285 60.0
Potri.010G054466 Populus trichocarpa HOM05D001304 ORTHO05D007800 8.6e-79 297.7 283 59.7
CiPaw.06G063200 Carya illinoinensis HOM05D001304 ORTHO05D007800 1.5e-78 297.0 289 60.9
SGA_v2.0_scaffold64G21891 Striga asiatica HOM05D001304 ORTHO05D007800 1.9e-78 296.6 285 58.9
Cfa009301 Carpinus fangiana HOM05D001304 ORTHO05D007800 2.5e-78 296.2 283 61.1
Gohir.A03G129900 Gossypium hirsutum HOM05D001304 ORTHO05D007800 2.5e-78 296.2 282 59.2
MD13G1110200 Malus domestica HOM05D001304 ORTHO05D007800 2.5e-78 296.2 287 60.6
Nn4g22445 Nelumbo nucifera HOM05D001304 ORTHO05D007800 2.5e-78 296.2 277 61.4
FAN07G2070 Fragaria x ananassa HOM05D001304 ORTHO05D007800 7.3e-78 294.7 283 58.7
VMungo1383G2972 Vigna mungo HOM05D001304 ORTHO05D007800 7.3e-78 294.7 290 58.6
QL03p055365 Quercus lobata HOM05D001304 ORTHO05D007800 9.5e-78 294.3 282 60.3
RcHm_v2.0_Chr4g0431491 Rosa chinensis HOM05D001304 ORTHO05D007800 1.6e-77 293.5 284 59.2
Thecc.02G272500 Theobroma cacao HOM05D001304 ORTHO05D007800 1.6e-77 293.5 280 58.6
Oeu041694.1 Olea europaea HOM05D001304 ORTHO05D007800 2.1e-77 293.1 311 54.0
Sabra10G0050400 Salix brachista HOM05D001304 ORTHO05D007800 3.6e-77 292.4 283 58.7
Cc11_g16440 Coffea canephora HOM05D001304 ORTHO05D007800 6.2e-77 291.6 283 58.0
FvH4_4g24570 Fragaria vesca HOM05D001304 ORTHO05D007800 8.1e-77 291.2 283 58.0
FAN12G0304 Fragaria x ananassa HOM05D001304 ORTHO05D007800 8.1e-77 291.2 283 58.0
Glyma.18G010200 Glycine max HOM05D001304 ORTHO05D007800 1.4e-76 290.4 292 58.6
Gorai.005G172700 Gossypium raimondii HOM05D001304 ORTHO05D007800 1.4e-76 290.4 281 58.0
Lalb_Chr11g0075661 Lupinus albus HOM05D001304 ORTHO05D007800 1.4e-76 290.4 295 58.3
CANSAT21G0986 Cannabis sativa HOM05D001304 ORTHO05D007800 1.8e-76 290.0 285 57.2
Ca_16492_v3 Cicer arietinum L. HOM05D001304 ORTHO05D007800 1.8e-76 290.0 291 57.7
Gohir.D02G153600 Gossypium hirsutum HOM05D001304 ORTHO05D007800 2.4e-76 289.7 281 58.0
MBI11_g16648_MAGBIO Magnolia biondii HOM05D001304 ORTHO05D007800 3.1e-76 289.3 290 57.6
Phvul.001G258500 Phaseolus vulgaris HOM05D001304 ORTHO05D007800 4.0e-76 288.9 289 57.8
Aqoxy5G03558 Aquilegia oxysepala HOM05D001304 ORTHO05D007800 6.8e-76 288.1 286 57.7
Atru.chr11.2222 Acer truncatum HOM05D001304 ORTHO05D007800 1.2e-75 287.3 284 58.8
DCAR_026485 Daucus carota HOM05D001304 ORTHO05D007800 1.5e-75 287.0 284 56.7
FAN17G0228 Fragaria x ananassa HOM05D001304 ORTHO05D007800 2.0e-75 286.6 283 57.6
COL.COLO4_23601 Corchorus olitorius HOM05D001304 ORTHO05D007800 7.6e-75 284.6 290 55.9
Medtr3g086000 Medicago truncatula HOM05D001304 ORTHO05D007800 7.6e-75 284.6 292 57.2
PSO782G2509 Papaver somniferum HOM05D001304 ORTHO05D007800 7.6e-75 284.6 293 55.6
ECA233G6138 Erigeron canadensis HOM05D001304 ORTHO05D007800 1.3e-74 283.9 288 55.2
PGR102G3374 Punica granatum HOM05D001304 ORTHO05D007800 1.3e-74 283.9 284 56.7
ClCG08G017380 Citrullus lanatus HOM05D001304 ORTHO05D007800 1.7e-74 283.5 296 55.7
TWI75G0249 Tripterygium wilfordii HOM05D001304 ORTHO05D007800 1.7e-74 283.5 287 57.5
MELO3C010721.2 Cucumis melo HOM05D001304 ORTHO05D007800 2.2e-74 283.1 296 56.1
CsaV3_2G025240 Cucumis sativus L. HOM05D001304 ORTHO05D007800 3.8e-74 282.3 293 56.0
PSO063G3228 Papaver somniferum HOM05D001304 ORTHO05D007800 6.4e-74 281.6 301 53.8
Lsat_1_v5_gn_8_151441 Lactuca sativa HOM05D001304 ORTHO05D007800 8.4e-74 281.2 289 54.7
Peaxi162Scf00160g00921 Petunia axillaris HOM05D001304 ORTHO05D007800 8.4e-74 281.2 293 54.6
Psat5g093160 Pisum sativum HOM05D001304 ORTHO05D007800 8.4e-74 281.2 292 55.8
Eucgr.B03454 Eucalyptus grandis HOM05D001304 ORTHO05D007800 1.1e-73 280.8 286 54.5
TPR.G33396 Trifolium pratense HOM05D001304 ORTHO05D007800 1.1e-73 280.8 291 56.0
HanXRQChr12g0372151 Helianthus annuus HOM05D001304 ORTHO05D007800 1.9e-73 280.0 293 54.9
Solyc09g014890.3 Solanum lycopersicum HOM05D001304 ORTHO05D007800 5.4e-73 278.5 283 54.8
Sopen09g007800 Solanum pennellii HOM05D001304 ORTHO05D007800 1.6e-72 276.9 283 54.4
arahy.Tifrunner.gnm1.ann1.D3J7CW Arachis hypogaea HOM05D001304 ORTHO05D007800 2.7e-72 276.2 294 55.1
arahy.Tifrunner.gnm1.ann1.J2BJ93 Arachis hypogaea HOM05D001304 ORTHO05D007800 1.0e-71 274.2 294 54.4
Sed0013965 Sechium edule HOM05D001304 ORTHO05D007800 1.0e-71 274.2 297 55.2
Haze_12334 Corylus avellana HOM05D001304 ORTHO05D007800 2.5e-70 269.6 245 62.9
Lj6g0014976 Lotus japonicus HOM05D001304 ORTHO05D007800 2.5e-70 269.6 293 52.6
unitig_747.g21137 Utricularia gibba HOM05D001304 ORTHO05D007800 3.3e-70 269.2 274 55.8
GSVIVG01010319001 Vitis vinifera HOM05D001304 ORTHO05D007800 2.6e-67 259.6 283 53.7
Atru.BG.281.p Acer truncatum HOM05D001304 ORTHO05D007800 4.4e-67 258.8 231 63.6
ATR0824G247 Amborella trichopoda HOM05D001304 ORTHO05D007800 1.7e-66 256.9 284 51.8
Ah.03g133760 Amaranthus hybridus HOM05D001304 ORTHO05D007800 2.4e-65 253.1 285 53.7
THA.LOC104825527 Tarenaya hassleriana HOM05D001304 ORTHO05D007800 2.7e-64 249.6 288 50.0
Actinidia30684 Actinidia chinensis HOM05D001304 ORTHO05D007800 1.9e-62 243.4 199 68.8
AUR62024175 Chenopodium quinoa HOM05D001304 ORTHO05D007800 7.3e-62 241.5 277 53.1
AUR62005559 Chenopodium quinoa HOM05D001304 ORTHO05D007800 8.1e-61 238.0 331 46.8
Os01g0902200 Oryza sativa ssp. japonica HOM05D001304 ORTHO05D007800 9.0e-60 234.6 285 48.8
BcaB03g15176 Brassica carinata HOM05D001304 ORTHO05D007800 2.0e-59 233.4 287 50.2
Hund25432 Selenicereus undatus HOM05D001304 ORTHO05D007800 4.5e-59 232.3 299 48.2
BolC6t39193H Brassica oleracea HOM05D001304 ORTHO05D007800 7.6e-59 231.5 276 50.0
CARHR060280 Cardamine hirsuta HOM05D001304 ORTHO05D007800 2.2e-58 229.9 284 48.6
BcaB03g15369 Brassica carinata HOM05D001304 ORTHO05D007800 2.9e-58 229.6 279 49.1
BcaC08g46186 Brassica carinata HOM05D001304 ORTHO05D007800 4.9e-58 228.8 276 49.6
BraA07t31049Z Brassica rapa HOM05D001304 ORTHO05D007800 1.1e-57 227.6 287 48.4
Thhalv10018203m.g Eutrema salsugineum HOM05D001304 ORTHO05D007800 2.4e-57 226.5 281 48.0
AT1G67690 Arabidopsis thaliana HOM05D001304 ORTHO05D007800 5.4e-57 225.3 280 48.6
C06p38530 Brassica napus HOM05D001304 ORTHO05D007800 1.2e-56 224.2 280 48.2
Carub.0002s1412 Capsella rubella HOM05D001304 ORTHO05D007800 1.2e-56 224.2 280 49.3
Sp5g22680 Schrenkiella parvula HOM05D001304 ORTHO05D007800 1.2e-56 224.2 286 47.6
A07p34200 Brassica napus HOM05D001304 ORTHO05D007800 3.5e-56 222.6 314 44.9
AL2G26390 Arabidopsis lyrata HOM05D001304 ORTHO05D007800 6.0e-56 221.9 279 48.7
C06p42370 Brassica napus HOM05D001304 ORTHO05D007800 7.9e-56 221.5 302 45.0
A07p32460 Brassica napus HOM05D001304 ORTHO05D007800 6.7e-55 218.4 280 46.4
Aa31LG11G12080 Aethionema arabicum HOM05D001304 ORTHO05D007800 1.9e-54 216.9 281 48.4
BraA07t30870Z Brassica rapa HOM05D001304 ORTHO05D007800 1.8e-52 210.3 315 42.9
BolC6t38946H Brassica oleracea HOM05D001304 ORTHO05D007800 6.9e-52 208.4 318 42.5
EL10Ac6g13421 Beta vulgaris HOM05D001304 ORTHO05D007800 1.1e-49 201.1 354 41.8
Sc11g0000750 Simmondsia chinensis HOM05D001304 ORTHO05D007800 9.6e-46 188.0 195 57.4
vmacro01092 Vaccinium macrocarpon HOM05D001304 ORTHO05D007800 6.2e-45 185.3 125 76.8
Nitab4.5_0000139g0030 Nicotiana tabacum HOM05D001304 ORTHO05D007800 1.1e-44 184.5 205 52.2
AagrBONN_evm.TU.Sc2ySwM_368.2332 Anthoceros agrestis HOM05D002380 ORTHO05D008286 1.5e-43 180.6 287 41.5
Mapoly0080s0066 Marchantia polymorpha HOM05D001304 ORTHO05D007800 1.5e-43 180.6 292 40.1
Pp3c19_17580 Physcomitrium patens HOM05D001304 ORTHO05D007800 7.6e-43 178.3 282 41.1
vmacro01093 Vaccinium macrocarpon HOM05D001304 ORTHO05D007800 7.6e-43 178.3 174 60.3
FAN22G1988 Fragaria x ananassa HOM05D001304 ORTHO05D007800 1.8e-39 167.2 170 57.6
CDE09G0141 Ceratophyllum demersum HOM05D001304 ORTHO05D007800 8.7e-39 164.9 224 43.8
Cpa.g.sc86.3 Carica papaya HOM05D001304 ORTHO05D007800 2.3e-31 140.2 175 48.6
Pp3c18_20030 Physcomitrium patens HOM05D001304 ORTHO05D007800 2.2e-29 133.7 285 34.0
CAN.G1220.1 Capsicum annuum HOM05D001304 ORTHO05D007800 3.4e-27 126.3 145 47.6
MD16G1110100 Malus domestica HOM05D001304 ORTHO05D007800 2.9e-26 123.2 93 71.0
Glyma.11G247133 Glycine max HOM05D001304 ORTHO05D007800 3.8e-26 122.9 121 54.5
MD16G1110200 Malus domestica HOM05D001304 ORTHO05D007800 6.1e-24 115.5 94 66.0
SMO364G0683 Selaginella moellendorffii HOM05D001304 ORTHO05D007800 4.5e-19 99.4 182 39.0
Zm00001eb144370 Zea mays HOM05D001304 ORTHO05D007800 6.7e-15 85.5 94 50.0
Nitab4.5_0002483g0020 Nicotiana tabacum HOM05D001304 ORTHO05D007800 1.4e-12 77.8 54 59.3
C06p27360 Brassica napus HOM05D001304 ORTHO05D040989 2.6e-11 73.6 93 44.1
BolC6t37906H Brassica oleracea HOM05D001304 ORTHO05D040989 2.6e-11 73.6 93 44.1
HPP92_008946 Vanilla planifolia HOM05D001304 ORTHO05D007800 2.5e-09 67.0 76 50.0
MD02G1151800 Malus domestica HOM05D001304 ORTHO05D007800 1.6e-08 64.3 117 40.2
SEGI_20923 Sequoiadendron giganteum HOM05D001304 ORTHO05D007800 8.8e-07 58.5 55 54.5


User provided reference genes

Program Settings