Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003418 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 6.0e-114 414.1 193 100.0
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 4.6e-90 334.7 196 82.7
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 1.4e-86 323.2 196 78.1
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 1.4e-86 323.2 196 78.1
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 6.9e-86 320.9 196 78.6
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 6.9e-86 320.9 196 77.6
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 2.0e-85 319.3 196 77.6
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 2.6e-85 318.9 189 78.8
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 4.5e-85 318.2 196 77.0
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 4.5e-85 318.2 189 79.4
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 5.8e-85 317.8 196 78.1
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 7.6e-85 317.4 196 76.5
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 7.6e-85 317.4 196 77.0
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 1.0e-84 317.0 196 77.0
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 1.7e-84 316.2 196 77.0
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 1.7e-84 316.2 196 77.0
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 2.2e-84 315.8 196 77.6
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 2.2e-84 315.8 185 78.9
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 2.9e-84 315.5 196 76.5
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 3.8e-84 315.1 196 76.5
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 3.8e-84 315.1 196 76.5
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 6.5e-84 314.3 196 76.5
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 8.4e-84 313.9 196 77.0
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 1.1e-83 313.5 196 76.0
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 1.4e-83 313.2 166 83.1
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 1.4e-83 313.2 196 75.5
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 1.9e-83 312.8 197 75.1
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 2.5e-83 312.4 189 77.8
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 2.5e-83 312.4 196 74.5
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 2.5e-83 312.4 196 76.5
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 3.2e-83 312.0 196 76.0
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 3.2e-83 312.0 196 74.5
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 3.2e-83 312.0 196 75.5
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 3.2e-83 312.0 189 76.7
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 3.2e-83 312.0 196 77.0
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 4.2e-83 311.6 196 76.0
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 4.2e-83 311.6 196 74.5
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 4.2e-83 311.6 196 74.5
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 4.2e-83 311.6 196 74.5
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 5.5e-83 311.2 189 78.3
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 5.5e-83 311.2 196 75.5
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 7.1e-83 310.8 189 77.2
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 7.1e-83 310.8 196 76.0
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 9.3e-83 310.5 189 76.7
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 1.2e-82 310.1 189 76.7
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 1.6e-82 309.7 196 76.0
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 2.7e-82 308.9 196 76.0
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 4.6e-82 308.1 196 75.0
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 4.6e-82 308.1 189 76.2
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 6.1e-82 307.8 196 74.0
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 6.1e-82 307.8 189 76.2
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 1.0e-81 307.0 194 74.2
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 1.3e-81 306.6 196 75.0
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 1.3e-81 306.6 189 75.7
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 1.3e-81 306.6 189 77.2
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 1.3e-81 306.6 196 75.5
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 2.3e-81 305.8 196 75.0
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 2.3e-81 305.8 196 75.0
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 3.0e-81 305.4 189 76.7
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 3.9e-81 305.1 210 70.0
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 3.9e-81 305.1 189 76.2
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 3.9e-81 305.1 189 76.2
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 5.1e-81 304.7 198 74.2
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 5.1e-81 304.7 196 74.5
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 1.1e-80 303.5 189 76.2
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 1.1e-80 303.5 189 76.2
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 1.5e-80 303.1 203 72.9
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 1.5e-80 303.1 189 75.1
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 1.5e-80 303.1 196 74.5
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 1.5e-80 303.1 209 70.8
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.9e-80 302.8 202 70.3
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 2.5e-80 302.4 196 73.5
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 2.5e-80 302.4 196 74.5
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 3.3e-80 302.0 196 73.0
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 3.3e-80 302.0 193 73.6
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 5.7e-80 301.2 196 73.5
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 5.7e-80 301.2 189 75.1
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 7.4e-80 300.8 196 74.0
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 9.7e-80 300.4 189 74.1
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 1.6e-79 299.7 189 74.6
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 1.6e-79 299.7 196 74.0
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 2.2e-79 299.3 196 72.4
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 2.2e-79 299.3 196 73.0
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 2.2e-79 299.3 196 73.0
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 2.2e-79 299.3 196 73.0
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 2.2e-79 299.3 196 74.0
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 4.8e-79 298.1 217 66.8
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 6.3e-79 297.7 203 71.9
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 6.3e-79 297.7 196 73.0
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 1.1e-78 297.0 197 71.6
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 1.4e-78 296.6 189 73.5
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 4.1e-78 295.0 196 73.0
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 5.3e-78 294.7 189 73.0
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 5.3e-78 294.7 196 72.4
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 9.0e-78 293.9 223 65.9
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 1.2e-77 293.5 196 71.9
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 1.2e-77 293.5 196 71.9
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 4.2e-75 285.0 186 72.6
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 6.1e-74 281.2 193 68.4
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 3.7e-71 271.9 176 72.2
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 7.7e-69 264.2 196 63.8
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 5.0e-68 261.5 196 61.7
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 1.1e-64 250.4 198 61.6
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 3.8e-60 235.3 196 61.7
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 3.8e-60 235.3 194 58.2
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 5.2e-57 224.9 166 67.5
Glyma.06G234050 Glycine max HOM05D006017 ORTHO05D007821 1.2e-50 203.8 107 86.0
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 3.6e-50 202.2 107 85.0
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 2.3e-49 199.5 174 59.2
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 4.0e-49 198.7 190 54.2
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 2.0e-48 196.4 222 45.9
FAN25G2436 Fragaria x ananassa HOM05D006017 ORTHO05D007821 3.7e-47 192.2 132 68.9
TWI38G1497 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 2.7e-45 186.0 112 77.7
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 3.9e-28 129.0 120 58.3
TWI38G0821 Tripterygium wilfordii HOM05D006017 ORTHO05D413584 3.1e-25 119.4 59 88.1
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 5.8e-24 115.2 165 47.3
Nitab4.5_0004022g0010 Nicotiana tabacum HOM05D006017 ORTHO05D007821 3.7e-23 112.5 51 92.2
Rhsim07G0153900 Rhododendron simsii HOM05D006017 ORTHO05D000252 3.3e-19 99.4 56 82.1
arahy.Tifrunner.gnm1.ann1.EZ2Q4B Arachis hypogaea HOM05D006004 ORTHO05D006976 1.8e-17 93.6 51 80.4
A10p11370 Brassica napus HOM05D006017 ORTHO05D007821 1.7e-12 77.0 169 37.3
BolC9t57289H Brassica oleracea HOM05D006017 ORTHO05D104628 1.8e-09 67.0 95 41.1


User provided reference genes

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