Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003388 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 3.1e-162 575.1 295 100.0
CSS0043436 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 1.2e-161 573.2 295 99.7
Actinidia34241 Actinidia chinensis HOM05D006582 ORTHO05D008313 2.2e-152 542.3 295 93.6
Rhsim03G0211600 Rhododendron simsii HOM05D006582 ORTHO05D008313 1.7e-147 526.2 295 90.2
Dinv29249 Davidia involucrata HOM05D006582 ORTHO05D008313 6.5e-144 514.2 295 88.8
Hma1.2p1_0415F.1_g148010 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 6.1e-142 507.7 295 86.1
vmacro06405 Vaccinium macrocarpon HOM05D006582 ORTHO05D008313 1.4e-138 496.5 341 76.8
Migut.F00182 Erythranthe guttata HOM05D006582 ORTHO05D008313 6.5e-136 487.6 295 83.1
SGA_v2.0_scaffold18G08434 Striga asiatica HOM05D006582 ORTHO05D008313 2.5e-135 485.7 295 81.7
GSVIVG01038593001 Vitis vinifera HOM05D006582 ORTHO05D008313 4.2e-135 485.0 299 82.6
SalBow4G1606 Salvia bowleyana HOM05D006582 ORTHO05D008313 9.4e-135 483.8 295 81.7
Lj3A900T44 Lonicera japonica HOM05D006582 ORTHO05D008313 6.1e-134 481.1 297 82.8
Sopen03g022560 Solanum pennellii HOM05D006582 ORTHO05D008313 6.1e-134 481.1 295 81.4
Lsat_1_v5_gn_2_135281 Lactuca sativa HOM05D006582 ORTHO05D008313 4.0e-133 478.4 300 81.3
PGSC0003DMG402018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 6.7e-133 477.6 295 81.4
Solyc03g082820.3 Solanum lycopersicum HOM05D006582 ORTHO05D008313 2.6e-132 475.7 295 80.3
Peaxi162Scf00740g00331 Petunia axillaris HOM05D006582 ORTHO05D008313 1.7e-131 473.0 295 80.3
CsaV3_5G000310 Cucumis sativus L. HOM05D006582 ORTHO05D008313 3.1e-130 468.8 305 78.0
Cfa016201 Carpinus fangiana HOM05D006582 ORTHO05D008313 4.1e-130 468.4 303 78.9
MELO3C005901.2 Cucumis melo HOM05D006582 ORTHO05D008313 9.1e-130 467.2 305 78.4
RcHm_v2.0_Chr1g0355871 Rosa chinensis HOM05D006582 ORTHO05D008313 9.1e-130 467.2 300 80.7
unitig_747.g21740 Utricularia gibba HOM05D006582 ORTHO05D008313 3.5e-129 465.3 295 76.9
Sed0002968 Sechium edule HOM05D006582 ORTHO05D008313 4.5e-129 464.9 306 77.5
FAN03G0584 Fragaria x ananassa HOM05D006582 ORTHO05D008313 1.0e-128 463.8 300 80.7
FAN06G3963 Fragaria x ananassa HOM05D006582 ORTHO05D008313 1.0e-128 463.8 300 80.3
FvH4_7g14460 Fragaria vesca HOM05D006582 ORTHO05D008313 1.7e-128 463.0 300 80.3
FAN06G2233 Fragaria x ananassa HOM05D006582 ORTHO05D008313 1.7e-128 463.0 300 80.3
FAN01G0099 Fragaria x ananassa HOM05D006582 ORTHO05D008313 2.2e-128 462.6 300 80.0
Cc04_g16300 Coffea canephora HOM05D006582 ORTHO05D008313 3.8e-128 461.8 295 79.3
MD07G1135900 Malus domestica HOM05D006582 ORTHO05D008313 3.8e-128 461.8 300 79.7
CiPaw.06G044200 Carya illinoinensis HOM05D006582 ORTHO05D008313 5.0e-128 461.5 302 77.5
Thecc.03G203200 Theobroma cacao HOM05D006582 ORTHO05D008313 5.0e-128 461.5 312 77.2
PGR142G1628 Punica granatum HOM05D006582 ORTHO05D008313 5.5e-127 458.0 303 77.6
TAR374G0762 Trochodendron aralioides HOM05D006582 ORTHO05D008313 2.1e-126 456.1 298 77.9
Ciclev10021376m.g Citrus clementina HOM05D006582 ORTHO05D008313 2.7e-126 455.7 300 76.3
Prupe.2G171600 Prunus persica HOM05D006582 ORTHO05D008313 4.7e-126 454.9 301 78.4
TWI60G0746 Tripterygium wilfordii HOM05D006582 ORTHO05D008313 4.7e-126 454.9 314 77.1
HanXRQChr07g0206401 Helianthus annuus HOM05D006582 ORTHO05D008313 2.3e-125 452.6 294 79.3
CAN.G481.47 Capsicum annuum HOM05D006582 ORTHO05D008313 3.0e-125 452.2 297 77.4
Duzib068G0295 Durio zibethinus HOM05D006582 ORTHO05D008313 3.0e-125 452.2 312 76.0
Haze_00249 Corylus avellana HOM05D006582 ORTHO05D008313 4.4e-124 448.4 331 71.6
Haze_00255 Corylus avellana HOM05D006582 ORTHO05D008313 4.4e-124 448.4 331 71.6
Sabra15G0024300 Salix brachista HOM05D006582 ORTHO05D008313 9.8e-124 447.2 309 75.4
Gorai.004G122700 Gossypium raimondii HOM05D006582 ORTHO05D008313 1.3e-123 446.8 274 82.5
Manes.01G148600 Manihot esculenta HOM05D006582 ORTHO05D008313 2.2e-123 446.0 301 77.1
QL09p007748 Quercus lobata HOM05D006582 ORTHO05D008313 2.2e-123 446.0 308 74.0
Gohir.D08G113800 Gossypium hirsutum HOM05D006582 ORTHO05D008313 2.8e-123 445.7 274 81.8
Nn6g34389 Nelumbo nucifera HOM05D006582 ORTHO05D008313 2.8e-123 445.7 299 76.6
THA.LOC104811904 Tarenaya hassleriana HOM05D006582 ORTHO05D008313 4.8e-123 444.9 304 73.7
Ah.07g205040 Amaranthus hybridus HOM05D006582 ORTHO05D008313 2.4e-122 442.6 273 79.9
CANSAT21G1996 Cannabis sativa HOM05D006582 ORTHO05D008313 3.1e-122 442.2 302 76.8
Phvul.011G018800 Phaseolus vulgaris HOM05D006582 ORTHO05D008313 5.4e-122 441.4 301 75.7
AUR62035580 Chenopodium quinoa HOM05D006582 ORTHO05D008313 7.0e-122 441.0 286 76.9
EL10Ac3g05224 Beta vulgaris HOM05D006582 ORTHO05D008313 1.6e-121 439.9 273 78.8
AUR62006048 Chenopodium quinoa HOM05D006582 ORTHO05D008313 3.5e-121 438.7 269 79.9
VMungo1127G0470 Vigna mungo HOM05D006582 ORTHO05D008313 3.5e-121 438.7 300 75.3
COL.COLO4_16812 Corchorus olitorius HOM05D006582 ORTHO05D008313 1.3e-120 436.8 312 73.4
arahy.Tifrunner.gnm1.ann1.AV4C6H Arachis hypogaea HOM05D006582 ORTHO05D008313 1.7e-120 436.4 302 74.8
arahy.Tifrunner.gnm1.ann1.D33ADG Arachis hypogaea HOM05D006582 ORTHO05D008313 1.7e-120 436.4 302 74.8
Aqoxy7G00041 Aquilegia oxysepala HOM05D006582 ORTHO05D008313 2.3e-120 436.0 296 74.3
Lj3g0025694 Lotus japonicus HOM05D006582 ORTHO05D008313 5.0e-120 434.9 301 76.7
Glyma.11G108800 Glycine max HOM05D006582 ORTHO05D008313 6.6e-120 434.5 310 73.9
Hund11634 Selenicereus undatus HOM05D006582 ORTHO05D008313 6.6e-120 434.5 271 78.2
Sc19g0000750 Simmondsia chinensis HOM05D006582 ORTHO05D008313 1.1e-119 433.7 295 74.9
DCAR_008960 Daucus carota HOM05D006582 ORTHO05D008313 1.6e-118 429.9 284 77.1
Aa31LG3G9690 Aethionema arabicum HOM05D006582 ORTHO05D008313 8.0e-118 427.6 306 70.3
Glyma.12G016600 Glycine max HOM05D006582 ORTHO05D008313 8.0e-118 427.6 302 74.5
AT4G27750 Arabidopsis thaliana HOM05D006582 ORTHO05D008313 5.2e-117 424.9 306 71.2
Ca_18952_v3 Cicer arietinum L. HOM05D006582 ORTHO05D008313 5.2e-117 424.9 305 72.5
BcaNung01623 Brassica carinata HOM05D006582 ORTHO05D008313 8.9e-117 424.1 306 70.9
Thhalv10025816m.g Eutrema salsugineum HOM05D006582 ORTHO05D008313 1.2e-116 423.7 306 70.3
TPR.G19615 Trifolium pratense HOM05D006582 ORTHO05D008313 1.2e-116 423.7 305 71.8
Medtr4g078140 Medicago truncatula HOM05D006582 ORTHO05D008313 1.5e-116 423.3 307 71.7
BcaC09g50542 Brassica carinata HOM05D006582 ORTHO05D008313 2.6e-116 422.5 306 70.3
Sp7g25720 Schrenkiella parvula HOM05D006582 ORTHO05D008313 3.4e-116 422.2 306 69.9
A01p19210 Brassica napus HOM05D006582 ORTHO05D008313 5.7e-116 421.4 306 70.3
C01p24110 Brassica napus HOM05D006582 ORTHO05D008313 5.7e-116 421.4 306 70.3
BraA01t01863Z Brassica rapa HOM05D006582 ORTHO05D008313 9.8e-116 420.6 306 70.3
CARHR235480 Cardamine hirsuta HOM05D006582 ORTHO05D008313 9.8e-116 420.6 306 69.6
Lalb_Chr03g0024361 Lupinus albus HOM05D006582 ORTHO05D008313 1.7e-115 419.9 304 72.0
Carub.0007s1306 Capsella rubella HOM05D006582 ORTHO05D008313 2.8e-115 419.1 306 69.0
SGA_v2.0_scaffold44G16825 Striga asiatica HOM05D006582 ORTHO05D008313 6.3e-115 417.9 295 70.8
AL7G24900 Arabidopsis lyrata HOM05D006582 ORTHO05D008313 8.3e-115 417.5 307 69.1
PSO782G4269 Papaver somniferum HOM05D006582 ORTHO05D008313 1.1e-114 417.2 296 70.9
Psat7g170040 Pisum sativum HOM05D006582 ORTHO05D008313 1.1e-114 417.2 305 71.5
Nitab4.5_0002780g0150 Nicotiana tabacum HOM05D006582 ORTHO05D008313 2.9e-112 409.1 314 69.4
BolC1t02368H Brassica oleracea HOM05D006582 ORTHO05D008313 5.0e-112 408.3 335 64.5
MD01G1064000 Malus domestica HOM05D006582 ORTHO05D008313 8.6e-112 407.5 319 69.9
ECA238G3804 Erigeron canadensis HOM05D006582 ORTHO05D008313 1.9e-111 406.4 273 77.7
Hund21029 Selenicereus undatus HOM05D006582 ORTHO05D008313 1.6e-110 403.3 288 70.8
Nitab4.5_0007755g0010 Nicotiana tabacum HOM05D006582 ORTHO05D008313 1.8e-109 399.8 336 64.9
BcaNung01628 Brassica carinata HOM05D006582 ORTHO05D008313 1.9e-103 379.8 306 65.7
MBI04_g35986_MAGBIO Magnolia biondii HOM05D006582 ORTHO05D008313 2.1e-102 376.3 297 68.0
Hma1.2p1_0415F.1_g148020 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 4.0e-101 372.1 220 84.5
BcaNung01632 Brassica carinata HOM05D006582 ORTHO05D008313 7.0e-98 361.3 320 61.9
ATR0933G001 Amborella trichopoda HOM05D006582 ORTHO05D008313 9.5e-95 350.9 309 61.2
Os06g0129300 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 5.2e-93 345.1 272 65.1
Zm00001eb378450 Zea mays HOM05D006582 ORTHO05D008313 1.3e-88 330.5 272 62.1
Eucgr.K00407 Eucalyptus grandis HOM05D006582 ORTHO05D008313 1.1e-87 327.4 233 75.1
Gohir.A08G102500 Gossypium hirsutum HOM05D006582 ORTHO05D008313 5.8e-84 315.1 199 80.4
HPP92_007389 Vanilla planifolia HOM05D006582 ORTHO05D008313 6.4e-83 311.6 278 59.0
MD01G1064500 Malus domestica HOM05D006582 ORTHO05D008313 1.6e-81 307.0 202 78.7
MD01G1063600 Malus domestica HOM05D006582 ORTHO05D008313 5.3e-77 292.0 254 63.8
CDE04G1908 Ceratophyllum demersum HOM05D006582 ORTHO05D008313 7.8e-73 278.1 295 50.8
Potri.015G029300 Populus trichocarpa HOM05D006582 ORTHO05D008313 3.9e-72 275.8 209 71.3
Os10g0520900 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 4.3e-63 245.7 263 47.9
Zm00001eb021230 Zea mays HOM05D006582 ORTHO05D008313 1.0e-56 224.6 281 42.3
Cpa.g.sc3.116 Carica papaya HOM05D006582 ORTHO05D008313 5.1e-56 222.2 192 63.5
PGSC0003DMG401018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 3.4e-52 209.5 155 72.9
Mapoly0081s0017 Marchantia polymorpha HOM05D006582 ORTHO05D008313 3.2e-50 203.0 312 38.8
SMO356G0114 Selaginella moellendorffii HOM05D001613 ORTHO05D001556 3.9e-48 196.1 299 37.5
Hma1.2p1_0512F.1_g169380 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 2.8e-46 189.9 289 46.0
Pp3c14_24810 Physcomitrium patens HOM05D006582 ORTHO05D008313 6.5e-43 178.7 219 44.3
AagrBONN_evm.TU.Sc2ySwM_228.4673 Anthoceros agrestis HOM05D006582 ORTHO05D008313 1.2e-41 174.5 228 43.0
CiPaw.05G199600 Carya illinoinensis HOM05D006582 ORTHO05D008313 1.0e-35 154.8 116 69.0
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 5.7e-31 139.0 285 35.1
Hma1.2p1_0415F.1_g148000 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 1.5e-28 131.0 88 77.3
Rhsim03G0115100 Rhododendron simsii HOM05D006582 ORTHO05D023108 7.4e-23 112.1 135 51.9
SHI19113 Sapria himalayana HOM05D006582 ORTHO05D008313 4.1e-21 106.3 74 68.9
SHI19111 Sapria himalayana HOM05D006582 ORTHO05D008313 2.0e-20 104.0 93 59.1
SEGI_26283 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 3.0e-16 90.1 78 59.0
MD07G1135700 Malus domestica HOM05D006582 ORTHO05D008313 1.9e-10 70.9 79 57.0
SEGI_35321 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 2.0e-07 60.8 57 45.6


User provided reference genes

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