Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003386 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.0e-159 563.5 285 100.0
CSS0007773 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-124 449.9 285 82.8
CSS0045870 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-83 313.5 299 59.9
CSS0034941 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-81 307.4 299 59.2
CSS0046748 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.4e-73 278.9 220 68.6
CSS0025416 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.4e-71 271.9 353 49.9
CSS0016107 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-45 187.2 218 54.1
Rhsim02G0101600 Rhododendron simsii HOM05D000002 ORTHO05D000001 7.4e-44 181.8 273 42.1
Rhsim05G0062600 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.7e-40 170.6 362 34.8
Rhsim04G0108900 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.6e-38 162.9 343 34.7
CSS0050038 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.4e-36 155.2 281 40.9
Rhsim09G0019300 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.3e-35 154.5 337 33.8
Lju225C4G4 Lonicera japonica HOM05D000002 ORTHO05D000001 1.4e-34 151.0 198 44.4
CSS0021158 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.9e-34 148.7 224 42.0
Rhsim06G0125700 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.6e-28 130.2 214 40.2
CSS0039702 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.7e-25 118.6 175 42.9
Lju225C0G8 Lonicera japonica HOM05D000002 ORTHO05D000001 7.2e-23 112.1 171 42.7
CSS0049708 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.7e-21 105.5 97 52.6
CSS0029429 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.8e-21 105.1 127 47.2
CSS0014430 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-19 100.5 108 46.3
MD14G1225200 Malus domestica HOM05D000002 ORTHO05D000001 2.2e-19 100.5 330 27.9
CAN.G447.8 Capsicum annuum HOM05D000002 ORTHO05D000001 5.0e-16 89.4 86 52.3
MSTRG.19383 Avicennia marina HOM05D000073 ORTHO05D000033 1.1e-15 88.2 131 40.5
TAR042G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 9.4e-15 85.1 310 26.1
SGA_v2.0_scaffold31G12742 Striga asiatica HOM05D000073 ORTHO05D000033 4.0e-13 79.7 148 35.8
MD16G1247000 Malus domestica HOM05D000002 ORTHO05D003361 5.2e-13 79.3 365 25.8
Prupe.4G199600 Prunus persica HOM05D000002 ORTHO05D000001 5.2e-13 79.3 178 32.6
Migut.E01660 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.0e-12 77.4 228 30.7
Migut.F01590 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.4e-12 76.6 207 29.5
Migut.H01198 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.4e-12 76.6 207 29.5
CSS0001687 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.7e-12 75.9 68 54.4
CSS0045539 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.7e-12 75.9 243 29.6
RcHm_v2.0_Chr3g0465981 Rosa chinensis HOM05D000002 ORTHO05D000001 9.7e-12 75.1 340 26.5
Migut.E01000 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.3e-11 74.7 177 31.6
Migut.J01067 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.3e-11 74.7 182 28.0
MD14G1189500 Malus domestica HOM05D000002 ORTHO05D000001 1.7e-11 74.3 325 24.6
CSS0007683 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.7e-11 73.2 63 58.7
Migut.G01154 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.7e-11 73.2 197 26.9
TAR650G0001 Trochodendron aralioides HOM05D000067 ORTHO05D000001 3.7e-11 73.2 248 27.8
RcHm_v2.0_Chr2g0129181 Rosa chinensis HOM05D000002 ORTHO05D000001 4.8e-11 72.8 323 27.2
Migut.G00019 Erythranthe guttata HOM05D000002 ORTHO05D000001 6.3e-11 72.4 235 27.7
MD00G1084700 Malus domestica HOM05D000002 ORTHO05D000001 6.3e-11 72.4 184 29.9
MD12G1185900 Malus domestica HOM05D000002 ORTHO05D000001 6.3e-11 72.4 332 24.4
MD02G1010600 Malus domestica HOM05D000002 ORTHO05D000001 8.3e-11 72.0 224 31.7
Peaxi162Scf00023g01122 Petunia axillaris HOM05D010760 ORTHO05D000001 1.1e-10 71.6 200 27.5
Psat1g154000 Pisum sativum HOM05D000002 ORTHO05D000001 1.8e-10 70.9 203 29.6
CSS0043017 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-10 70.5 134 41.0
Migut.C00657 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.4e-10 70.5 174 28.2
RcHm_v2.0_Chr7g0190501 Rosa chinensis HOM05D000002 ORTHO05D000001 3.1e-10 70.1 221 26.7
TAR301G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.1e-10 70.1 198 27.8
Lj2P1186T25 Lonicera japonica HOM05D000002 ORTHO05D000001 4.1e-10 69.7 51 62.7
Oeu037102.1 Olea europaea HOM05D000002 ORTHO05D000001 4.1e-10 69.7 286 25.9
RcHm_v2.0_Chr2g0117741 Rosa chinensis HOM05D000002 ORTHO05D000001 7.0e-10 68.9 346 25.1
Nitab4.5_0000164g0090 Nicotiana tabacum HOM05D002833 ORTHO05D003210 9.1e-10 68.6 327 23.9
PSO013G0223 Papaver somniferum HOM05D000002 ORTHO05D000001 9.1e-10 68.6 233 27.0
QL08p061042 Quercus lobata HOM05D000002 ORTHO05D000001 9.1e-10 68.6 307 25.1
TAR549G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 9.1e-10 68.6 177 29.4
SGA_v2.0_scaffold2G01302 Striga asiatica HOM05D000033 ORTHO05D001614 1.2e-09 68.2 214 27.6
CSS0042232 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-09 67.8 285 25.6
Migut.D01554 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.7e-09 67.0 90 38.9
Hma1.2p1_0840F.1_g226720 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.7e-09 67.0 314 24.5
Hma1.2p1_3787F.1_g337595 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.7e-09 67.0 314 24.5
CSS0039053 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.5e-09 66.6 285 25.3
MD13G1050200 Malus domestica HOM05D000002 ORTHO05D000001 3.5e-09 66.6 367 23.4
Sabra18G0120700 Salix brachista HOM05D000002 ORTHO05D000001 3.5e-09 66.6 335 23.3
SEGI_13448 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 3.5e-09 66.6 322 24.2
CSS0034832 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-09 66.2 319 25.4
Hma1.2p1_0445F.1_g154480 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.9e-09 65.9 255 25.9
Psat0s454g0080 Pisum sativum HOM05D000002 ORTHO05D000001 5.9e-09 65.9 263 27.8
CSS0034935 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.7e-09 65.5 334 25.1
CAN.G1859.1 Capsicum annuum HOM05D001133 ORTHO05D000941 7.7e-09 65.5 92 38.0
CANSAT21G1279 Cannabis sativa HOM05D000002 ORTHO05D000001 1.0e-08 65.1 131 33.6
MD12G1231800 Malus domestica HOM05D000002 ORTHO05D000001 1.0e-08 65.1 297 25.3
Cpa.g.sc188.27 Carica papaya HOM05D058748 ORTHO05D000001 1.3e-08 64.7 180 30.6
CSS0020834 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-08 63.9 330 24.8
Oeu019477.1 Olea europaea HOM05D000002 ORTHO05D000001 2.2e-08 63.9 282 24.5
Oeu057479.1 Olea europaea HOM05D000002 ORTHO05D000001 2.2e-08 63.9 284 24.3
PSO170G2197 Papaver somniferum HOM05D000002 ORTHO05D000001 2.2e-08 63.9 227 25.6
Sopen06g023490 Solanum pennellii HOM05D000002 ORTHO05D037744 2.2e-08 63.9 217 30.9
Lj2g0024035 Lotus japonicus HOM05D000002 ORTHO05D000001 3.8e-08 63.2 122 31.1
Nn1g03750 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.8e-08 63.2 127 32.3
PSO063G2914 Papaver somniferum HOM05D000002 ORTHO05D000001 5.0e-08 62.8 208 26.9
Gorai.013G092800 Gossypium raimondii HOM05D000002 ORTHO05D000001 6.5e-08 62.4 92 37.0
CAN.G134.31 Capsicum annuum HOM05D000085 ORTHO05D006184 1.1e-07 61.6 109 33.9
MELO3C013392.2 Cucumis melo HOM05D000002 ORTHO05D000001 1.1e-07 61.6 321 23.7
MD05G1320000 Malus domestica HOM05D000002 ORTHO05D000001 1.1e-07 61.6 189 29.6
MD13G1099200 Malus domestica HOM05D000002 ORTHO05D000001 1.1e-07 61.6 284 24.6
Peaxi162Scf00202g00046 Petunia axillaris HOM05D002833 ORTHO05D003210 1.1e-07 61.6 269 24.2
Sopen08g014470 Solanum pennellii HOM05D002431 ORTHO05D000001 1.1e-07 61.6 169 29.0
TAR541G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.5e-07 61.2 131 35.1
CsaV3_7G000640 Cucumis sativus L. HOM05D000002 ORTHO05D000001 1.9e-07 60.8 320 24.1
Hma1.2p1_0158F.1_g069590 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.9e-07 60.8 243 26.7
PSO339G0642 Papaver somniferum HOM05D000002 ORTHO05D000001 1.9e-07 60.8 254 24.8
Rhsim02G0160900 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.9e-07 60.8 224 25.9
SGA_v2.0_scaffold400G50849 Striga asiatica HOM05D000002 ORTHO05D000001 1.9e-07 60.8 87 37.9
MD17G1248200 Malus domestica HOM05D000002 ORTHO05D000001 3.2e-07 60.1 341 22.9
QL08p052300 Quercus lobata HOM05D000002 ORTHO05D000001 3.2e-07 60.1 87 40.2
PSO478G3075 Papaver somniferum HOM05D000002 ORTHO05D000001 4.2e-07 59.7 163 29.4
TAR180G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.2e-07 59.7 242 24.4
CSS0041353 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.5e-07 59.3 337 23.4
PSO384G4937 Papaver somniferum HOM05D000002 ORTHO05D000001 5.5e-07 59.3 155 29.0
Atru.chr2.2580 Acer truncatum HOM05D000002 ORTHO05D000001 7.2e-07 58.9 313 25.2
Migut.F01917 Erythranthe guttata HOM05D000002 ORTHO05D000001 7.2e-07 58.9 173 27.7
Hma1.2p1_1307F.1_g274730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.2e-07 58.9 216 24.1
PSO339G3901 Papaver somniferum HOM05D000002 ORTHO05D000001 7.2e-07 58.9 123 35.0
Peaxi162Scf00031g00297 Petunia axillaris HOM05D010760 ORTHO05D003210 7.2e-07 58.9 195 25.6
HanXRQChr03g0078371 Helianthus annuus HOM05D000002 ORTHO05D000001 9.4e-07 58.5 342 25.1
VMungo1309G1660 Vigna mungo HOM05D000002 ORTHO05D000001 9.4e-07 58.5 243 28.8
HanXRQChr15g0476521 Helianthus annuus HOM05D000002 ORTHO05D000001 1.2e-06 58.2 191 26.7
Hma1.2p1_0018F.1_g012350 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.2e-06 58.2 112 27.7
Peaxi162Scf00153g01013 Petunia axillaris HOM05D000002 ORTHO05D000001 1.2e-06 58.2 135 32.6
Prupe.8G080900 Prunus persica HOM05D000002 ORTHO05D000001 1.2e-06 58.2 165 27.9
Hma1.2p1_2469F.1_g322690 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.6e-06 57.8 243 26.3
Rhsim05G0026100 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.6e-06 57.8 336 22.6
Hma1.2p1_0006F.1_g004720 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.1e-06 57.4 94 36.2
Sabra13G0070400 Salix brachista HOM05D000002 ORTHO05D000001 2.1e-06 57.4 234 23.9
Gorai.008G092500 Gossypium raimondii HOM05D000002 ORTHO05D000001 2.7e-06 57.0 197 25.4
Nn1g06783 Nelumbo nucifera HOM05D023713 ORTHO05D000001 2.7e-06 57.0 102 34.3
Nitab4.5_0005846g0030 Nicotiana tabacum HOM05D002833 ORTHO05D003210 2.7e-06 57.0 207 23.7
CSS0011950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.6e-06 56.6 225 24.9
FvH4_2g23291 Fragaria vesca HOM05D000002 ORTHO05D000001 3.6e-06 56.6 175 30.3
Hma1.2p1_0951F.1_g240790 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.6e-06 56.6 120 32.5
Nitab4.5_0003362g0070 Nicotiana tabacum HOM05D002833 ORTHO05D000001 3.6e-06 56.6 259 24.7
Sabra15G0028100 Salix brachista HOM05D000002 ORTHO05D000001 3.6e-06 56.6 335 22.4
Aqoxy5G02395 Aquilegia oxysepala HOM05D000002 ORTHO05D000001 4.7e-06 56.2 158 27.8
MD00G1024600 Malus domestica HOM05D000002 ORTHO05D000001 4.7e-06 56.2 346 22.3
TPR.G7779 Trifolium pratense HOM05D000002 ORTHO05D000001 4.7e-06 56.2 90 32.2
TWI77G0605 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 4.7e-06 56.2 99 33.3
CSS0025925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.1e-06 55.8 345 24.1
Migut.J01156 Erythranthe guttata HOM05D000002 ORTHO05D000001 6.1e-06 55.8 111 27.0
Eucgr.H00940 Eucalyptus grandis HOM05D000002 ORTHO05D000001 6.1e-06 55.8 90 32.2
Nn8g39601 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.1e-06 55.8 90 34.4
Prupe.8G084200 Prunus persica HOM05D000002 ORTHO05D000001 6.1e-06 55.8 305 25.6
Sabra01G0007200 Salix brachista HOM05D003064 ORTHO05D000001 6.1e-06 55.8 205 25.9
Sopen02g010030 Solanum pennellii HOM05D000002 ORTHO05D000001 6.1e-06 55.8 79 34.2
ECA247G1458 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.0e-06 55.5 221 24.9
HanXRQChr17g0541481 Helianthus annuus HOM05D000002 ORTHO05D000001 8.0e-06 55.5 217 23.0
PSO832G3798 Papaver somniferum HOM05D000002 ORTHO05D000001 8.0e-06 55.5 201 28.4
Peaxi162Scf00063g00071 Petunia axillaris HOM05D000002 ORTHO05D000001 8.0e-06 55.5 90 32.2
Peaxi162Scf00168g01729 Petunia axillaris HOM05D000002 ORTHO05D000001 8.0e-06 55.5 90 32.2


User provided reference genes

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