Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003373 Camellia sinensis var. sinensis HOM05D008002 ORTHO05D010148 1.9e-69 265.8 140 100.0
CiPaw.05G094700 Carya illinoinensis HOM05D008002 ORTHO05D010148 1.9e-37 159.5 110 67.3
Haze_01959 Corylus avellana HOM05D008002 ORTHO05D010148 2.5e-37 159.1 111 65.8
CANSAT25G0111 Cannabis sativa HOM05D008002 ORTHO05D010148 5.6e-37 157.9 111 70.3
Cfa005392 Carpinus fangiana HOM05D008002 ORTHO05D010148 2.8e-36 155.6 109 67.0
Rhsim11G0198500 Rhododendron simsii HOM05D008002 ORTHO05D010148 2.8e-36 155.6 130 62.3
QL11p056798 Quercus lobata HOM05D000114 ORTHO05D009898 3.6e-36 155.2 114 66.7
COL.COLO4_03847 Corchorus olitorius HOM05D008002 ORTHO05D010148 1.1e-35 153.7 118 62.7
MD05G1143100 Malus domestica HOM05D008002 ORTHO05D010148 1.4e-35 153.3 110 69.1
Prupe.8G181900 Prunus persica HOM05D008002 ORTHO05D010148 1.4e-35 153.3 109 67.9
Thecc.02G147800 Theobroma cacao HOM05D008002 ORTHO05D010148 1.4e-35 153.3 117 64.1
MD10G1142900 Malus domestica HOM05D008002 ORTHO05D010148 2.6e-34 149.1 110 68.2
Duzib132G1147 Durio zibethinus HOM05D008002 ORTHO05D010148 3.4e-34 148.7 117 61.5
Gohir.D04G151600 Gossypium hirsutum HOM05D008002 ORTHO05D010148 3.4e-34 148.7 114 62.3
FvH4_2g17020 Fragaria vesca HOM05D008002 ORTHO05D010148 5.8e-34 147.9 112 65.2
FAN24G1487 Fragaria x ananassa HOM05D008002 ORTHO05D010148 5.8e-34 147.9 112 65.2
FAN27G2383 Fragaria x ananassa HOM05D008002 ORTHO05D010148 5.8e-34 147.9 114 65.8
Actinidia20583 Actinidia chinensis HOM05D008002 ORTHO05D010148 7.6e-34 147.5 111 66.7
Haze_01969 Corylus avellana HOM05D008002 ORTHO05D010148 9.9e-34 147.1 109 64.2
Sed0014792 Sechium edule HOM05D008002 ORTHO05D010148 9.9e-34 147.1 110 63.6
ClCG02G003270 Citrullus lanatus HOM05D008002 ORTHO05D010148 1.3e-33 146.7 110 64.5
CsaV3_7G002100 Cucumis sativus L. HOM05D008002 ORTHO05D010148 1.3e-33 146.7 110 64.5
Gohir.A04G111300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.3e-33 146.7 114 61.4
Gorai.012G138300 Gossypium raimondii HOM05D008002 ORTHO05D010148 1.3e-33 146.7 114 60.5
Duzib248G0441 Durio zibethinus HOM05D008002 ORTHO05D010148 1.7e-33 146.4 116 61.2
MELO3C015697.2 Cucumis melo HOM05D008002 ORTHO05D010148 2.9e-33 145.6 109 62.4
RcHm_v2.0_Chr6g0281201 Rosa chinensis HOM05D008002 ORTHO05D010148 2.9e-33 145.6 114 65.8
Eucgr.I01542 Eucalyptus grandis HOM05D008002 ORTHO05D010148 3.8e-33 145.2 110 66.4
Potri.009G169400 Populus trichocarpa HOM05D008002 ORTHO05D010148 6.4e-33 144.4 109 60.6
FAN15G1289 Fragaria x ananassa HOM05D008002 ORTHO05D010148 8.4e-33 144.1 114 64.0
Gorai.013G065000 Gossypium raimondii HOM05D008002 ORTHO05D010148 8.4e-33 144.1 115 61.7
Potri.004G208200 Populus trichocarpa HOM05D008002 ORTHO05D010148 1.1e-32 143.7 110 60.0
Sabra04G0140100 Salix brachista HOM05D008002 ORTHO05D010148 1.4e-32 143.3 109 60.6
GSVIVG01023858001 Vitis vinifera HOM05D008002 ORTHO05D010148 1.9e-32 142.9 130 58.5
Actinidia17988 Actinidia chinensis HOM05D008002 ORTHO05D010148 3.2e-32 142.1 136 56.6
Gohir.D13G057750 Gossypium hirsutum HOM05D008002 ORTHO05D010148 3.2e-32 142.1 115 61.7
Dinv14183 Davidia involucrata HOM05D008002 ORTHO05D010148 4.2e-32 141.7 115 62.6
Gohir.D02G193300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 7.1e-32 141.0 113 61.9
PGR142G3621 Punica granatum HOM05D008002 ORTHO05D010148 9.3e-32 140.6 111 63.1
TWI75G0824 Tripterygium wilfordii HOM05D008002 ORTHO05D010148 9.3e-32 140.6 109 61.5
TAR376G1088 Trochodendron aralioides HOM05D008002 ORTHO05D010148 9.3e-32 140.6 112 64.3
Gohir.A03G170200 Gossypium hirsutum HOM05D008002 ORTHO05D010148 3.5e-31 138.7 114 60.5
Gorai.005G216100 Gossypium raimondii HOM05D008002 ORTHO05D010148 3.5e-31 138.7 114 60.5
Nn8g40377 Nelumbo nucifera HOM05D008002 ORTHO05D010148 6.0e-31 137.9 117 59.8
CiPaw.06G114200 Carya illinoinensis HOM05D008002 ORTHO05D010148 7.9e-31 137.5 110 60.0
Nn2g12628 Nelumbo nucifera HOM05D008002 ORTHO05D010148 2.3e-30 136.0 117 59.8
Hund00100 Selenicereus undatus HOM05D008002 ORTHO05D010148 6.7e-30 134.4 109 63.3
Atru.chr5.3576 Acer truncatum HOM05D008002 ORTHO05D010148 3.3e-29 132.1 111 60.4
Lsat_1_v5_gn_3_48401 Lactuca sativa HOM05D008002 ORTHO05D010148 3.3e-29 132.1 111 57.7
Sc08g0002060 Simmondsia chinensis HOM05D008002 ORTHO05D010148 1.1e-27 127.1 109 56.0
MBI17_g13390_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 1.5e-26 123.2 105 57.1
HanXRQChr15g0490081 Helianthus annuus HOM05D008002 ORTHO05D010148 2.6e-26 122.5 109 52.3
PSO675G9248 Papaver somniferum HOM05D008002 ORTHO05D010148 5.8e-26 121.3 126 50.8
PSO541G1248 Papaver somniferum HOM05D008002 ORTHO05D010148 1.3e-25 120.2 126 50.0
Thhalv10027398m.g Eutrema salsugineum HOM05D008002 ORTHO05D010148 1.7e-25 119.8 109 58.7
Ciclev10029829m.g Citrus clementina HOM05D008002 ORTHO05D010148 2.4e-24 115.9 116 53.4
Oeu006116.1 Olea europaea HOM05D008002 ORTHO05D010148 4.2e-24 115.2 127 48.8
Sp7g37530 Schrenkiella parvula HOM05D008002 ORTHO05D010148 9.3e-24 114.0 107 55.1
HanXRQChr15g0479771 Helianthus annuus HOM05D008002 ORTHO05D010148 2.7e-23 112.5 116 47.4
MBI01_g17256_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 3.5e-23 112.1 86 64.0
TAR628G1479 Trochodendron aralioides HOM05D008002 ORTHO05D010148 3.9e-22 108.6 101 56.4
Eucgr.H05000 Eucalyptus grandis HOM05D008002 ORTHO05D010148 5.1e-22 108.2 111 49.5
Aqoxy6G02976 Aquilegia oxysepala HOM05D008002 ORTHO05D010148 6.7e-22 107.8 138 41.3
ATR0763G180 Amborella trichopoda HOM05D008002 ORTHO05D010148 4.3e-21 105.1 109 52.3
MBI12_g13710_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 4.3e-21 105.1 96 54.2
SEGI_35818 Sequoiadendron giganteum HOM05D008002 ORTHO05D010148 7.4e-21 104.4 109 47.7
MBI03_g24838_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 9.6e-21 104.0 94 55.3
AT4G38213 Arabidopsis thaliana HOM05D008002 ORTHO05D010148 2.1e-20 102.8 109 49.5
Zm00001eb035270 Zea mays HOM05D008002 ORTHO05D010148 4.8e-20 101.7 116 44.8
Carub.0007s0013 Capsella rubella HOM05D008002 ORTHO05D010148 6.2e-20 101.3 109 53.2
MBI18_g48147_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 8.1e-20 100.9 97 53.6
Os08g0512100 Oryza sativa ssp. japonica HOM05D008002 ORTHO05D010148 2.4e-19 99.4 128 40.6
HPP92_007470 Vanilla planifolia HOM05D008002 ORTHO05D010148 4.9e-17 91.7 119 42.0
CDE10G0941 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 8.4e-17 90.9 97 48.5
CDE10G0514 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 9.3e-16 87.4 96 46.9
Gohir.A13G064166 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.0e-14 84.0 75 53.3
AL7G10120 Arabidopsis lyrata HOM05D008002 ORTHO05D010148 3.7e-12 75.5 93 44.1
CARHR293990 Cardamine hirsuta HOM05D008002 ORTHO05D010148 6.5e-09 64.7 86 41.9


User provided reference genes

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