Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003354 Camellia sinensis var. sinensis HOM05D000767 ORTHO05D000635 1.5e-66 256.5 180 100.0
CSS0031258 Camellia sinensis var. sinensis HOM05D000767 ORTHO05D000635 1.4e-35 153.7 125 91.2
Rhsim09G0111400 Rhododendron simsii HOM05D000767 ORTHO05D000635 8.9e-19 97.8 98 57.1
Potri.008G117500 Populus trichocarpa HOM05D000767 ORTHO05D000635 7.5e-18 94.7 70 70.0
Cc11_g10520 Coffea canephora HOM05D000767 ORTHO05D000635 1.3e-17 94.0 92 58.7
GSVIVG01011942001 Vitis vinifera HOM05D000767 ORTHO05D000635 8.3e-17 91.3 70 65.7
Atru.chr11.1341 Acer truncatum HOM05D000767 ORTHO05D000635 1.8e-16 90.1 72 66.7
PGSC0003DMG400000828 Solanum tuberosum HOM05D000767 ORTHO05D000635 1.8e-16 90.1 72 68.1
Potri.010G128900 Populus trichocarpa HOM05D000767 ORTHO05D000635 4.1e-16 89.0 70 65.7
Oeu004596.1 Olea europaea HOM05D000767 ORTHO05D000635 1.2e-15 87.4 91 57.1
Sabra08G0089100 Salix brachista HOM05D000767 ORTHO05D000635 1.6e-15 87.0 76 65.8
Dinv21124 Davidia involucrata HOM05D000767 ORTHO05D000635 4.6e-15 85.5 68 66.2
TWI79G0305 Tripterygium wilfordii HOM05D000767 ORTHO05D000635 4.6e-15 85.5 72 58.3
Thecc.02G360000 Theobroma cacao HOM05D000767 ORTHO05D000635 1.0e-14 84.3 72 59.7
CiPaw.16G003500 Carya illinoinensis HOM05D000767 ORTHO05D000635 1.3e-14 84.0 70 62.9
MSTRG.2256 Avicennia marina HOM05D000767 ORTHO05D000635 2.3e-14 83.2 71 63.4
Nn4g23748 Nelumbo nucifera HOM05D000767 ORTHO05D000635 3.0e-14 82.8 70 60.0
SalBow8G1915 Salvia bowleyana HOM05D000767 ORTHO05D000635 3.0e-14 82.8 71 64.8
Ciclev10031793m.g Citrus clementina HOM05D000767 ORTHO05D000635 3.9e-14 82.4 70 60.0
COL.COLO4_07878 Corchorus olitorius HOM05D000767 ORTHO05D000635 3.9e-14 82.4 96 49.0
Lj3A1019T28 Lonicera japonica HOM05D000767 ORTHO05D000635 3.9e-14 82.4 71 62.0
Prupe.1G306300 Prunus persica HOM05D000767 ORTHO05D000635 8.6e-14 81.3 74 59.5
PGR119G0636 Punica granatum HOM05D000767 ORTHO05D000635 1.1e-13 80.9 70 60.0
TWI31G1259 Tripterygium wilfordii HOM05D000767 ORTHO05D000635 1.1e-13 80.9 72 55.6
Gorai.013G080200 Gossypium raimondii HOM05D000767 ORTHO05D000635 1.5e-13 80.5 71 62.0
Manes.14G098400 Manihot esculenta HOM05D000767 ORTHO05D000635 1.5e-13 80.5 71 56.3
Gohir.A13G053414 Gossypium hirsutum HOM05D000767 ORTHO05D000635 2.5e-13 79.7 71 60.6
Sc04g0006650 Simmondsia chinensis HOM05D000767 ORTHO05D000635 2.5e-13 79.7 94 47.9
Duzib268G1649 Durio zibethinus HOM05D000767 ORTHO05D000635 3.3e-13 79.3 69 58.0
ECA234G4102 Erigeron canadensis HOM05D000767 ORTHO05D000635 4.3e-13 79.0 71 53.5
Lsat_1_v5_gn_4_20080 Lactuca sativa HOM05D000767 ORTHO05D000635 5.6e-13 78.6 71 59.2
Nn3g17763 Nelumbo nucifera HOM05D000767 ORTHO05D000635 5.6e-13 78.6 69 56.5
Actinidia14858 Actinidia chinensis HOM05D000767 ORTHO05D000635 7.3e-13 78.2 69 63.8
Duzib251G0675 Durio zibethinus HOM05D000767 ORTHO05D000635 7.3e-13 78.2 69 56.5
FAN17G0808 Fragaria x ananassa HOM05D000767 ORTHO05D000635 9.5e-13 77.8 77 59.7
PSO063G1878 Papaver somniferum HOM05D000767 ORTHO05D000635 1.2e-12 77.4 99 50.5
EL10Ac6g14468 Beta vulgaris HOM05D000767 ORTHO05D000635 1.6e-12 77.0 68 61.8
TAR371G0985 Trochodendron aralioides HOM05D000767 ORTHO05D000635 1.6e-12 77.0 68 60.3
Sabra10G0098000 Salix brachista HOM05D000767 ORTHO05D000635 2.1e-12 76.6 70 60.0
PSO339G2558 Papaver somniferum HOM05D000767 ORTHO05D000635 2.8e-12 76.3 99 48.5
Gohir.D13G070000 Gossypium hirsutum HOM05D000767 ORTHO05D000635 3.6e-12 75.9 71 60.6
ClCG00G003380 Citrullus lanatus HOM05D000767 ORTHO05D000635 4.7e-12 75.5 68 57.4
ClCG08G005100 Citrullus lanatus HOM05D000767 ORTHO05D000635 4.7e-12 75.5 68 57.4
MD13G1045700 Malus domestica HOM05D000767 ORTHO05D000635 4.7e-12 75.5 71 59.2
CsaV3_6G003320 Cucumis sativus L. HOM05D000767 ORTHO05D000635 6.2e-12 75.1 73 57.5
QL01p044829 Quercus lobata HOM05D000767 ORTHO05D000635 6.2e-12 75.1 70 55.7
HanXRQChr16g0529111 Helianthus annuus HOM05D000767 ORTHO05D000635 8.0e-12 74.7 71 53.5
RcHm_v2.0_Chr4g0435701 Rosa chinensis HOM05D000767 ORTHO05D000635 8.0e-12 74.7 77 55.8
Hund25096 Selenicereus undatus HOM05D000767 ORTHO05D000635 8.0e-12 74.7 79 54.4
CiPaw.15G004100 Carya illinoinensis HOM05D000767 ORTHO05D000635 1.1e-11 74.3 69 59.4
MELO3C011546.2 Cucumis melo HOM05D000767 ORTHO05D000635 1.4e-11 73.9 73 56.2
Duzib248G1037 Durio zibethinus HOM05D000767 ORTHO05D000635 1.4e-11 73.9 71 53.5
FvH4_4g27990 Fragaria vesca HOM05D000767 ORTHO05D000635 1.4e-11 73.9 77 58.4
MD16G1047300 Malus domestica HOM05D000767 ORTHO05D000635 1.4e-11 73.9 97 47.4
Haze_17448 Corylus avellana HOM05D000767 ORTHO05D000635 1.8e-11 73.6 71 56.3
FAN12G0286 Fragaria x ananassa HOM05D000767 ORTHO05D000635 2.3e-11 73.2 75 58.7
Glyma.10G204200 Glycine max HOM05D000767 ORTHO05D000635 3.1e-11 72.8 70 55.7
Glyma.20G186500 Glycine max HOM05D000767 ORTHO05D000635 3.1e-11 72.8 70 55.7
Gohir.D12G173000 Gossypium hirsutum HOM05D000767 ORTHO05D000635 3.1e-11 72.8 92 43.5
Gorai.008G185500 Gossypium raimondii HOM05D000767 ORTHO05D000635 3.1e-11 72.8 92 43.5
TAR573G0002 Trochodendron aralioides HOM05D000767 ORTHO05D000635 3.1e-11 72.8 72 52.8
HanXRQChr17g0567951 Helianthus annuus HOM05D000767 ORTHO05D000635 4.0e-11 72.4 71 56.3
DCAR_023678 Daucus carota HOM05D000767 ORTHO05D000635 5.2e-11 72.0 73 64.4
FAN07G1023 Fragaria x ananassa HOM05D000767 ORTHO05D000635 5.2e-11 72.0 75 57.3
FAN22G2012 Fragaria x ananassa HOM05D000767 ORTHO05D000635 5.2e-11 72.0 76 53.9
Oeu042040.1 Olea europaea HOM05D000767 ORTHO05D000635 5.2e-11 72.0 70 60.0
MSTRG.819 Avicennia marina HOM05D000767 ORTHO05D000635 1.5e-10 70.5 72 54.2
CANSAT64G0459 Cannabis sativa HOM05D000767 ORTHO05D000635 1.5e-10 70.5 69 52.2
VMungo0720G1026 Vigna mungo HOM05D000767 ORTHO05D000635 2.0e-10 70.1 70 52.9
Eucgr.G02343 Eucalyptus grandis HOM05D000767 ORTHO05D000635 2.6e-10 69.7 77 59.7
Phvul.007G102900 Phaseolus vulgaris HOM05D000767 ORTHO05D000635 2.6e-10 69.7 70 52.9
AUR62002914 Chenopodium quinoa HOM05D000767 ORTHO05D000635 3.4e-10 69.3 67 55.2
AUR62035274 Chenopodium quinoa HOM05D000767 ORTHO05D000635 4.4e-10 68.9 67 55.2
Cfa018621 Carpinus fangiana HOM05D000767 ORTHO05D000635 5.8e-10 68.6 67 50.7
Cpa.g.sc1.213 Carica papaya HOM05D000767 ORTHO05D000635 7.5e-10 68.2 67 58.2
Oeu041885.1 Olea europaea HOM05D000767 ORTHO05D000635 1.3e-09 67.4 93 46.2
Aqoxy3G00358 Aquilegia oxysepala HOM05D000767 ORTHO05D000635 3.7e-09 65.9 71 52.1
Solyc05g009720.3 Solanum lycopersicum HOM05D000767 ORTHO05D000635 3.7e-09 65.9 72 51.4
Sopen05g005540 Solanum pennellii HOM05D000767 ORTHO05D000635 8.3e-09 64.7 72 51.4
Ah.02g127090 Amaranthus hybridus HOM05D000767 ORTHO05D000635 1.1e-08 64.3 67 50.7
SGA_v2.0_scaffold170G38746 Striga asiatica HOM05D000767 ORTHO05D000635 1.1e-08 64.3 75 54.7
CSS0031217 Camellia sinensis var. sinensis HOM05D000767 ORTHO05D000635 1.4e-08 63.9 49 65.3
Hund05760 Selenicereus undatus HOM05D000767 ORTHO05D000635 1.4e-08 63.9 49 71.4
Lalb_Chr02g0151731 Lupinus albus HOM05D000767 ORTHO05D000635 7.0e-08 61.6 68 50.0
Phvul.003G028000 Phaseolus vulgaris HOM05D000767 ORTHO05D000635 7.0e-08 61.6 70 45.7
MSTRG.13507 Avicennia marina HOM05D000767 ORTHO05D000635 1.6e-07 60.5 73 49.3
TAR622G0860 Trochodendron aralioides HOM05D000767 ORTHO05D000635 1.6e-07 60.5 68 45.6
Lalb_Chr21g0313321 Lupinus albus HOM05D000767 ORTHO05D000635 2.0e-07 60.1 70 48.6
Nitab4.5_0005194g0010 Nicotiana tabacum HOM05D000767 ORTHO05D000635 2.7e-07 59.7 72 50.0
arahy.Tifrunner.gnm1.ann1.GRY8GW Arachis hypogaea HOM05D000767 ORTHO05D000635 3.5e-07 59.3 70 48.6
Glyma.01G086700 Glycine max HOM05D000767 ORTHO05D000635 4.6e-07 58.9 74 45.9
Lsat_1_v5_gn_8_38620 Lactuca sativa HOM05D000767 ORTHO05D000635 1.3e-06 57.4 65 46.2
Medtr5g054300 Medicago truncatula HOM05D000767 ORTHO05D000635 1.3e-06 57.4 70 42.9
Sed0014412 Sechium edule HOM05D000767 ORTHO05D000635 1.7e-06 57.0 73 45.2
Aa31LG1G1450 Aethionema arabicum HOM05D000767 ORTHO05D000635 2.3e-06 56.6 70 42.9
Migut.L01092 Erythranthe guttata HOM05D000767 ORTHO05D000635 3.0e-06 56.2 47 66.0
THA.LOC104805248 Tarenaya hassleriana HOM05D000767 ORTHO05D000635 3.0e-06 56.2 71 46.5
Aa31LG2G6560 Aethionema arabicum HOM05D000767 ORTHO05D000635 3.9e-06 55.8 69 43.5
Manes.06G071500 Manihot esculenta HOM05D000767 ORTHO05D000635 3.9e-06 55.8 37 75.7
Oeu041883.1 Olea europaea HOM05D000767 ORTHO05D000635 5.0e-06 55.5 93 43.0
SalBow8G5444 Salvia bowleyana HOM05D000767 ORTHO05D000635 5.0e-06 55.5 57 52.6
arahy.Tifrunner.gnm1.ann1.ZMGM97 Arachis hypogaea HOM05D000767 ORTHO05D000635 6.6e-06 55.1 70 44.3
A08p32360 Brassica napus HOM05D000767 ORTHO05D000635 6.6e-06 55.1 70 41.4
Lj5g0011154 Lotus japonicus HOM05D000767 ORTHO05D000635 8.6e-06 54.7 64 48.4


User provided reference genes

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