Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003243 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 6.0e-79 297.4 141 100.0
Dinv35112 Davidia involucrata HOM05D000590 ORTHO05D006825 1.6e-55 219.5 134 78.4
Rhsim01G0172200 Rhododendron simsii HOM05D000590 ORTHO05D006825 5.3e-51 204.5 134 76.1
Oeu015362.1 Olea europaea HOM05D000590 ORTHO05D006825 1.5e-50 203.0 134 70.9
SalBow3G4091 Salvia bowleyana HOM05D000590 ORTHO05D006825 1.7e-49 199.5 134 68.7
Lj7A501T47 Lonicera japonica HOM05D000590 ORTHO05D006825 1.1e-48 196.8 134 69.4
Migut.B01870 Erythranthe guttata HOM05D000590 ORTHO05D006825 1.4e-48 196.4 134 67.2
Oeu004946.1 Olea europaea HOM05D000590 ORTHO05D006825 9.3e-48 193.7 140 64.3
Duzib138G1692 Durio zibethinus HOM05D000590 ORTHO05D006825 1.6e-47 193.0 135 66.7
PGR031G1800 Punica granatum HOM05D000590 ORTHO05D006825 2.7e-47 192.2 135 67.4
HanXRQChr04g0120221 Helianthus annuus HOM05D000590 ORTHO05D006825 3.5e-47 191.8 135 67.4
GSVIVG01027098001 Vitis vinifera HOM05D000590 ORTHO05D006825 3.5e-47 191.8 134 67.2
AUR62004487 Chenopodium quinoa HOM05D000590 ORTHO05D006825 4.6e-47 191.4 134 68.7
GSVIVG01027095001 Vitis vinifera HOM05D000590 ORTHO05D006825 4.6e-47 191.4 134 67.2
Peaxi162Scf00786g00323 Petunia axillaris HOM05D000590 ORTHO05D006825 6.0e-47 191.0 135 66.7
EL10Ac1g00275 Beta vulgaris HOM05D000590 ORTHO05D006825 7.9e-47 190.7 134 67.9
Cfa003800 Carpinus fangiana HOM05D000590 ORTHO05D001713 7.9e-47 190.7 134 67.9
AUR62023466 Chenopodium quinoa HOM05D000590 ORTHO05D006825 1.0e-46 190.3 134 67.9
Solyc01g095870.3 Solanum lycopersicum HOM05D000590 ORTHO05D006825 1.0e-46 190.3 135 65.9
Sopen01g039610 Solanum pennellii HOM05D000590 ORTHO05D006825 1.0e-46 190.3 135 65.9
Nn2g14772 Nelumbo nucifera HOM05D000590 ORTHO05D006825 1.3e-46 189.9 134 67.2
Haze_15659 Corylus avellana HOM05D000590 ORTHO05D006825 1.8e-46 189.5 134 67.9
Nitab4.5_0004999g0020 Nicotiana tabacum HOM05D000590 ORTHO05D006825 1.8e-46 189.5 135 66.7
CAN.G986.8 Capsicum annuum HOM05D000590 ORTHO05D006825 3.9e-46 188.3 135 65.2
Actinidia28121 Actinidia chinensis HOM05D000590 ORTHO05D006825 6.7e-46 187.6 134 68.7
Glyma.16G025000 Glycine max HOM05D000590 ORTHO05D006825 8.7e-46 187.2 134 67.2
Cc02_g39290 Coffea canephora HOM05D000590 ORTHO05D006825 1.9e-45 186.0 135 65.9
Duzib133G1228 Durio zibethinus HOM05D000590 ORTHO05D006825 2.5e-45 185.7 135 63.7
AL5G44280 Arabidopsis lyrata HOM05D000590 ORTHO05D006825 3.3e-45 185.3 134 64.2
Thecc.01G343200 Theobroma cacao HOM05D000590 ORTHO05D006825 3.3e-45 185.3 135 63.0
BcaB02g08144 Brassica carinata HOM05D000590 ORTHO05D006825 5.6e-45 184.5 134 63.4
Nitab4.5_0000838g0230 Nicotiana tabacum HOM05D000590 ORTHO05D006825 5.6e-45 184.5 135 64.4
Atru.chr5.661 Acer truncatum HOM05D000590 ORTHO05D006825 7.4e-45 184.1 135 62.2
Lsat_1_v5_gn_7_1240 Lactuca sativa HOM05D000590 ORTHO05D006825 7.4e-45 184.1 135 65.9
QL04p061137 Quercus lobata HOM05D000590 ORTHO05D006825 9.6e-45 183.7 135 66.7
TPR.G15352 Trifolium pratense HOM05D000590 ORTHO05D006825 9.6e-45 183.7 134 64.9
Psat4g160760 Pisum sativum HOM05D000590 ORTHO05D006825 2.1e-44 182.6 134 64.9
AT3G61730 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 3.7e-44 181.8 134 63.4
Phvul.010G113800 Phaseolus vulgaris HOM05D000590 ORTHO05D006825 3.7e-44 181.8 134 64.9
DCAR_006973 Daucus carota HOM05D000590 ORTHO05D006825 4.8e-44 181.4 166 57.2
TWI14G0815 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 4.8e-44 181.4 134 64.2
Aa31LG10G15730 Aethionema arabicum HOM05D000590 ORTHO05D001713 6.2e-44 181.0 134 61.2
MD01G1080100 Malus domestica HOM05D000590 ORTHO05D006825 6.2e-44 181.0 133 64.7
Prupe.2G187500 Prunus persica HOM05D000590 ORTHO05D006825 6.2e-44 181.0 134 64.2
CARHR172060 Cardamine hirsuta HOM05D000590 ORTHO05D006825 8.1e-44 180.6 134 60.4
Gorai.004G043900 Gossypium raimondii HOM05D000590 ORTHO05D006825 8.1e-44 180.6 135 63.7
Lj3g0003332 Lotus japonicus HOM05D000590 ORTHO05D006825 1.1e-43 180.3 134 64.2
Ciclev10023676m.g Citrus clementina HOM05D000590 ORTHO05D006825 1.4e-43 179.9 135 61.5
Thhalv10006430m.g Eutrema salsugineum HOM05D000590 ORTHO05D006825 1.4e-43 179.9 134 61.2
Migut.N01547 Erythranthe guttata HOM05D000590 ORTHO05D006825 1.8e-43 179.5 134 61.2
Gohir.D08G044900 Gossypium hirsutum HOM05D000590 ORTHO05D006825 1.8e-43 179.5 135 63.0
BcaB02g08143 Brassica carinata HOM05D000590 ORTHO05D006825 3.1e-43 178.7 134 60.4
ECA236G1053 Erigeron canadensis HOM05D000590 ORTHO05D001713 4.0e-43 178.3 135 63.0
AT5G36000 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 5.3e-43 177.9 134 60.4
Ca_23539_v3 Cicer arietinum L. HOM05D000590 ORTHO05D006825 5.3e-43 177.9 134 64.2
Gohir.A08G034400 Gossypium hirsutum HOM05D000590 ORTHO05D006825 5.3e-43 177.9 135 63.0
CsaV3_6G007130 Cucumis sativus L. HOM05D000590 ORTHO05D006825 9.0e-43 177.2 134 62.7
Medtr8g027735 Medicago truncatula HOM05D000590 ORTHO05D006825 9.0e-43 177.2 134 64.2
THA.LOC104802069 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 9.0e-43 177.2 135 63.0
Potri.014G098300 Populus trichocarpa HOM05D000590 ORTHO05D006825 4.5e-42 174.9 134 61.2
Carub.0005s2847 Capsella rubella HOM05D000590 ORTHO05D006825 7.6e-42 174.1 134 60.4
MELO3C022415.2 Cucumis melo HOM05D000590 ORTHO05D006825 7.6e-42 174.1 134 61.9
Sabra14G0072100 Salix brachista HOM05D000590 ORTHO05D001713 7.6e-42 174.1 134 61.2
Ah.05g179600 Amaranthus hybridus HOM05D000590 ORTHO05D006825 1.7e-41 172.9 135 63.7
TWI59G0780 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 1.7e-41 172.9 134 61.2
THA.LOC104817360 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 2.2e-41 172.6 134 61.9
BolC6t37952H Brassica oleracea HOM05D000590 ORTHO05D006825 4.9e-41 171.4 135 60.7
Aqoxy5G04231 Aquilegia oxysepala HOM05D000590 ORTHO05D006825 6.5e-41 171.0 134 60.4
RcHm_v2.0_Chr1g0359371 Rosa chinensis HOM05D000590 ORTHO05D006825 6.5e-41 171.0 132 62.1
BraA07t30209Z Brassica rapa HOM05D004730 ORTHO05D005705 8.4e-41 170.6 136 60.3
CANSAT56G2355 Cannabis sativa HOM05D000590 ORTHO05D006825 8.4e-41 170.6 135 60.7
BraA04t15812Z Brassica rapa HOM05D000590 ORTHO05D006825 1.4e-40 169.9 134 59.7
Eucgr.D02371 Eucalyptus grandis HOM05D000590 ORTHO05D006825 1.4e-40 169.9 134 61.2
PSO478G0645 Papaver somniferum HOM05D000590 ORTHO05D006825 3.2e-40 168.7 134 58.2
FAN03G1068 Fragaria x ananassa HOM05D000590 ORTHO05D006825 5.5e-40 167.9 135 58.5
PSO782G3674 Papaver somniferum HOM05D000590 ORTHO05D006825 5.5e-40 167.9 134 58.2
FvH4_7g16360 Fragaria vesca HOM05D000590 ORTHO05D006825 9.3e-40 167.2 135 58.5
FAN06G0495 Fragaria x ananassa HOM05D000590 ORTHO05D006825 9.3e-40 167.2 135 58.5
FAN06G0513 Fragaria x ananassa HOM05D000590 ORTHO05D006825 9.3e-40 167.2 135 58.5
SGA_v2.0_scaffold5G03015 Striga asiatica HOM05D000590 ORTHO05D006825 1.2e-39 166.8 104 71.2
FAN10G1076 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.6e-39 166.4 135 57.8
FAN01G2486 Fragaria x ananassa HOM05D000590 ORTHO05D006825 2.1e-39 166.0 135 57.8
FAN10G3131 Fragaria x ananassa HOM05D000590 ORTHO05D006825 4.6e-39 164.9 135 57.0
vmacro12678 Vaccinium macrocarpon HOM05D000590 ORTHO05D001713 4.6e-39 164.9 155 58.7
Manes.01G246600 Manihot esculenta HOM05D000590 ORTHO05D006825 6.0e-39 164.5 134 56.7
C06p27910 Brassica napus HOM05D000590 ORTHO05D006825 4.3e-37 158.3 158 51.9
GSVIVG01027114001 Vitis vinifera HOM05D000590 ORTHO05D006825 7.4e-37 157.5 138 58.0
A04p00950 Brassica napus HOM05D000590 ORTHO05D006825 3.7e-36 155.2 157 50.3
ClCG06G001200 Citrullus lanatus HOM05D000590 ORTHO05D006825 3.7e-36 155.2 104 67.3
PGSC0003DMG400000222 Solanum tuberosum HOM05D000590 ORTHO05D006825 4.8e-36 154.8 135 57.8
ATR0602G065 Amborella trichopoda HOM05D000590 ORTHO05D006825 8.2e-36 154.1 135 53.3
Sed0003230 Sechium edule HOM05D000590 ORTHO05D006825 2.6e-34 149.1 104 64.4
Sc26g0000660 Simmondsia chinensis HOM05D000590 ORTHO05D006825 3.8e-33 145.2 131 56.5
CiPaw.02G040500 Carya illinoinensis HOM05D000590 ORTHO05D006825 4.2e-32 141.7 134 53.0
C06p27850 Brassica napus HOM05D004730 ORTHO05D006825 3.9e-30 135.2 135 52.6
A07p25690 Brassica napus HOM05D004730 ORTHO05D005705 6.7e-30 134.4 136 52.2
C04p31120 Brassica napus HOM05D000590 ORTHO05D006825 1.9e-29 132.9 134 50.0
MBI06_g08454_MAGBIO Magnolia biondii HOM05D000590 ORTHO05D006825 1.3e-28 130.2 109 56.0
Glyma.07G056100 Glycine max HOM05D000590 ORTHO05D006825 2.8e-28 129.0 109 56.9
COL.COLO4_06291 Corchorus olitorius HOM05D000590 ORTHO05D000717 4.1e-27 125.2 107 57.0
HPP92_002828 Vanilla planifolia HOM05D000590 ORTHO05D006825 5.5e-24 114.8 125 49.6
HanXRQChr09g0243571 Helianthus annuus HOM05D000590 ORTHO05D006825 1.8e-22 109.8 85 62.4
SEGI_08329 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 6.7e-22 107.8 106 52.8
AagrBONN_evm.TU.Sc2ySwM_344.2724 Anthoceros agrestis HOM05D000590 ORTHO05D006825 2.8e-20 102.4 135 40.7
Os01g0219200 Oryza sativa ssp. japonica HOM05D000590 ORTHO05D006825 2.8e-20 102.4 142 39.4
Sp5g01640 Schrenkiella parvula HOM05D000590 ORTHO05D006825 8.2e-20 100.9 85 58.8
MSTRG.17339 Avicennia marina HOM05D000590 ORTHO05D006825 6.9e-19 97.8 83 59.0
BcaC02g10247 Brassica carinata HOM05D000590 ORTHO05D006825 1.2e-18 97.1 83 57.8
Pp3c6_8570 Physcomitrium patens HOM05D000590 ORTHO05D006825 2.0e-18 96.3 135 40.7
Rhsim02G0230200 Rhododendron simsii HOM05D000590 ORTHO05D006825 7.7e-18 94.4 115 45.2
arahy.Tifrunner.gnm1.ann1.AM6JUY Arachis hypogaea HOM05D000590 ORTHO05D006825 1.0e-17 94.0 83 59.0
VMungo0331G1406 Vigna mungo HOM05D000590 ORTHO05D000717 2.9e-17 92.4 83 57.8
Zm00001eb338700 Zea mays HOM05D000590 ORTHO05D006825 3.2e-16 89.0 140 35.7
Lalb_Chr10g0100491 Lupinus albus HOM05D000590 ORTHO05D006825 5.5e-16 88.2 83 56.6
unitig_747.g21341 Utricularia gibba HOM05D000590 ORTHO05D006825 1.6e-15 86.7 60 68.3
CBR_g49078 Chara braunii HOM05D000590 ORTHO05D006825 1.4e-14 83.6 172 28.5
GSVIVG01027108001 Vitis vinifera HOM05D000590 ORTHO05D006825 2.3e-14 82.8 74 55.4
Cpa.g.sc96.9 Carica papaya HOM05D000590 ORTHO05D006825 6.7e-14 81.3 170 32.4
Mapoly0251s0003 Marchantia polymorpha HOM05D000590 ORTHO05D006825 6.7e-14 81.3 139 37.4
Sabra02G0141900 Salix brachista HOM05D000590 ORTHO05D006825 8.8e-14 80.9 87 48.3
SHI13292 Sapria himalayana HOM05D000590 ORTHO05D006825 1.1e-13 80.5 83 53.0
TAR375G0589 Trochodendron aralioides HOM05D000590 ORTHO05D006825 2.6e-13 79.3 72 55.6
SMO164G0232 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 4.4e-13 78.6 138 36.2
CBR_g71803 Chara braunii HOM05D000590 ORTHO05D006825 5.7e-13 78.2 180 28.9
BolC4t24651H Brassica oleracea HOM05D000590 ORTHO05D006825 7.0e-11 71.2 79 45.6
SMO338G0043 Selaginella moellendorffii HOM05D004142 ORTHO05D005411 1.6e-10 70.1 110 38.2
VMungo0331G1881 Vigna mungo HOM05D000590 ORTHO05D006825 3.2e-08 62.4 51 54.9
MD07G1149100 Malus domestica HOM05D000590 ORTHO05D006825 4.2e-08 62.0 42 64.3
GSVIVG01027101001 Vitis vinifera HOM05D000590 ORTHO05D006825 3.6e-07 58.9 34 70.6
TPR.G3009 Trifolium pratense HOM05D000590 ORTHO05D006825 4.7e-07 58.5 68 48.5
CARHR055570 Cardamine hirsuta HOM05D000590 ORTHO05D006825 2.3e-06 56.2 54 53.7
Lalb_Chr10g0100501 Lupinus albus HOM05D000590 ORTHO05D006825 3.0e-06 55.8 39 59.0
CDE02G2715 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 4.0e-06 55.5 86 39.5


User provided reference genes

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