Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003229 Camellia sinensis var. sinensis HOM05D005597 ORTHO05D007304 0.0e+00 1088.2 538 100.0
Actinidia12571 Actinidia chinensis HOM05D005597 ORTHO05D007304 7.9e-265 916.8 564 81.0
CSS0014594 Camellia sinensis var. sinensis HOM05D005597 ORTHO05D007304 1.7e-262 909.1 565 80.9
Rhsim06G0207300 Rhododendron simsii HOM05D005597 ORTHO05D007304 6.5e-259 897.1 563 79.8
Dinv14987 Davidia involucrata HOM05D005597 ORTHO05D007304 3.7e-254 881.3 565 78.6
Hma1.2p1_1016F.1_g248150 Hydrangea macrophylla HOM05D005597 ORTHO05D007304 6.3e-254 880.6 564 78.2
Lj8A149T49 Lonicera japonica HOM05D005597 ORTHO05D007304 6.5e-251 870.5 571 77.4
TAR624G0947 Trochodendron aralioides HOM05D005597 ORTHO05D007304 6.7e-248 860.5 564 75.7
CiPaw.11G160900 Carya illinoinensis HOM05D005597 ORTHO05D007304 1.2e-247 859.8 573 75.6
TAR626G0744 Trochodendron aralioides HOM05D005597 ORTHO05D007304 1.2e-244 849.7 564 75.2
QL08p026520 Quercus lobata HOM05D005597 ORTHO05D007304 2.7e-244 848.6 546 76.4
Manes.03G102000 Manihot esculenta HOM05D005597 ORTHO05D007304 1.0e-243 846.7 564 73.6
arahy.Tifrunner.gnm1.ann1.06PSEJ Arachis hypogaea HOM05D005597 ORTHO05D007304 2.2e-243 845.5 567 73.9
Atru.chr2.2174 Acer truncatum HOM05D005597 ORTHO05D007304 2.9e-243 845.1 567 74.4
arahy.Tifrunner.gnm1.ann1.Z1JPC4 Arachis hypogaea HOM05D005597 ORTHO05D007304 8.5e-243 843.6 567 73.7
Cfa019573 Carpinus fangiana HOM05D005597 ORTHO05D007304 5.5e-242 840.9 568 74.6
ClCG11G017480 Citrullus lanatus HOM05D005597 ORTHO05D007304 6.1e-241 837.4 564 73.9
vmacro11932 Vaccinium macrocarpon HOM05D005597 ORTHO05D007304 1.0e-240 836.6 578 72.8
Nn1g09131 Nelumbo nucifera HOM05D005597 ORTHO05D007304 8.8e-240 833.6 564 73.4
SGA_v2.0_scaffold47G17797 Striga asiatica HOM05D005597 ORTHO05D007304 5.7e-239 830.9 567 72.7
TWI38G1600 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 7.5e-239 830.5 564 72.9
Migut.H01992 Erythranthe guttata HOM05D005597 ORTHO05D007304 1.7e-238 829.3 569 72.2
CsaV3_4G033140 Cucumis sativus L. HOM05D005597 ORTHO05D007304 3.7e-238 828.2 565 73.3
TWI39G1070 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 3.7e-238 828.2 564 73.8
Cc05_g11200 Coffea canephora HOM05D005597 ORTHO05D007304 1.1e-237 826.6 512 78.1
Duzib187G0678 Durio zibethinus HOM05D005597 ORTHO05D007304 1.4e-237 826.2 577 71.6
Gorai.013G173400 Gossypium raimondii HOM05D005597 ORTHO05D007304 1.4e-237 826.2 571 72.0
CAN.G162.8 Capsicum annuum HOM05D005597 ORTHO05D007304 2.4e-237 825.5 564 72.7
Gohir.A13G149000 Gossypium hirsutum HOM05D005597 ORTHO05D007304 4.1e-237 824.7 571 71.8
Thecc.07G110000 Theobroma cacao HOM05D005597 ORTHO05D007304 5.4e-237 824.3 578 71.6
Lalb_Chr01g0006811 Lupinus albus HOM05D005597 ORTHO05D007304 9.1e-237 823.5 560 73.2
Duzib213G0141 Durio zibethinus HOM05D005597 ORTHO05D007304 1.6e-236 822.8 578 71.1
FAN11G3052 Fragaria x ananassa HOM05D005597 ORTHO05D007304 2.0e-236 822.4 566 73.1
FAN21G1763 Fragaria x ananassa HOM05D005597 ORTHO05D007304 2.7e-236 822.0 566 73.9
MBI07_g03181_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D007304 5.9e-236 820.8 561 72.9
GSVIVG01014208001 Vitis vinifera HOM05D005597 ORTHO05D007304 7.7e-236 820.5 512 77.1
FvH4_3g18450 Fragaria vesca HOM05D005597 ORTHO05D007304 1.0e-235 820.1 566 73.0
MD03G1241900 Malus domestica HOM05D005597 ORTHO05D007304 1.7e-235 819.3 575 72.9
Phvul.005G066500 Phaseolus vulgaris HOM05D005597 ORTHO05D007304 1.7e-235 819.3 563 72.6
MSTRG.12867 Avicennia marina HOM05D005597 ORTHO05D007304 5.0e-235 817.8 567 71.1
Ca_03990_v3 Cicer arietinum L. HOM05D005597 ORTHO05D007304 5.0e-235 817.8 567 72.5
PGR083G2138 Punica granatum HOM05D005597 ORTHO05D007304 1.5e-234 816.2 570 73.0
Lj3g0024865 Lotus japonicus HOM05D005597 ORTHO05D007304 2.5e-234 815.5 561 71.7
Sed0009860 Sechium edule HOM05D005597 ORTHO05D007304 4.2e-234 814.7 517 76.8
Glyma.13G270500 Glycine max HOM05D005597 ORTHO05D007304 5.5e-234 814.3 535 75.1
Medtr2g076680 Medicago truncatula HOM05D005597 ORTHO05D007304 7.2e-234 813.9 565 71.3
MD11G1261800 Malus domestica HOM05D005597 ORTHO05D007304 9.5e-234 813.5 573 72.3
PGSC0003DMG400012388 Solanum tuberosum HOM05D005597 ORTHO05D007304 9.5e-234 813.5 565 72.6
AUR62043187 Chenopodium quinoa HOM05D005597 ORTHO05D007304 3.6e-233 811.6 571 70.4
Aqoxy1G02067 Aquilegia oxysepala HOM05D005597 ORTHO05D007304 4.7e-233 811.2 567 70.7
Prupe.4G166500 Prunus persica HOM05D005597 ORTHO05D007304 6.1e-233 810.8 571 71.8
RcHm_v2.0_Chr5g0031201 Rosa chinensis HOM05D005597 ORTHO05D007304 6.1e-233 810.8 567 72.5
VMungo1080G1355 Vigna mungo HOM05D005597 ORTHO05D007304 6.1e-233 810.8 563 71.9
Solyc07g062540.3 Solanum lycopersicum HOM05D005597 ORTHO05D007304 1.0e-232 810.1 565 72.4
Sopen07g030770 Solanum pennellii HOM05D005597 ORTHO05D007304 1.8e-232 809.3 565 72.6
Glyma.12G229300 Glycine max HOM05D005597 ORTHO05D007304 3.0e-232 808.5 535 74.6
Potri.011G110800 Populus trichocarpa HOM05D005597 ORTHO05D007304 3.0e-232 808.5 566 72.1
COL.COLO4_17568 Corchorus olitorius HOM05D005597 ORTHO05D007304 6.8e-232 807.4 601 68.6
EL10Ac4g08334 Beta vulgaris HOM05D005597 ORTHO05D007304 1.2e-231 806.6 585 68.9
FAN16G1691 Fragaria x ananassa HOM05D005597 ORTHO05D007304 3.4e-231 805.1 574 71.4
THA.LOC104812323 Tarenaya hassleriana HOM05D005597 ORTHO05D007304 2.8e-230 802.0 566 71.2
CARHR017370 Cardamine hirsuta HOM05D005597 ORTHO05D007304 1.4e-229 799.7 571 69.2
Eucgr.F01228 Eucalyptus grandis HOM05D005597 ORTHO05D007304 1.8e-229 799.3 570 71.4
Carub.0001s1664 Capsella rubella HOM05D005597 ORTHO05D007304 9.2e-229 797.0 566 69.1
AT1G16900 Arabidopsis thaliana HOM05D005597 ORTHO05D007304 5.9e-228 794.3 565 69.4
A06p12800 Brassica napus HOM05D005597 ORTHO05D007304 5.9e-228 794.3 564 68.6
BolC5t30227H Brassica oleracea HOM05D005597 ORTHO05D007304 2.3e-227 792.3 564 68.4
BraA06t24441Z Brassica rapa HOM05D005597 ORTHO05D007304 2.3e-227 792.3 564 68.4
HanXRQChr14g0442721 Helianthus annuus HOM05D005597 ORTHO05D007304 3.9e-227 791.6 568 71.0
Hund10564 Selenicereus undatus HOM05D005597 ORTHO05D007304 3.9e-227 791.6 557 71.1
BcaB02g06666 Brassica carinata HOM05D005597 ORTHO05D007304 6.6e-227 790.8 565 68.7
C05p15120 Brassica napus HOM05D005597 ORTHO05D007304 6.6e-227 790.8 564 68.4
ECA240G4584 Erigeron canadensis HOM05D000832 ORTHO05D000982 8.6e-227 790.4 567 70.0
TPR.G19385 Trifolium pratense HOM05D005597 ORTHO05D007304 8.6e-227 790.4 571 69.7
AL1G29070 Arabidopsis lyrata HOM05D005597 ORTHO05D007304 1.5e-226 789.6 565 69.4
A08p31230 Brassica napus HOM05D005597 ORTHO05D007304 3.3e-226 788.5 564 68.6
BraA08t35046Z Brassica rapa HOM05D005597 ORTHO05D007304 3.3e-226 788.5 564 68.6
CDE02G4663 Ceratophyllum demersum HOM05D005597 ORTHO05D007304 4.3e-226 788.1 567 69.0
Sp1g15040 Schrenkiella parvula HOM05D005597 ORTHO05D007304 5.6e-226 787.7 564 68.6
C08p17610 Brassica napus HOM05D005597 ORTHO05D007304 7.3e-226 787.3 564 68.4
Lsat_1_v5_gn_9_100260 Lactuca sativa HOM05D005597 ORTHO05D007304 9.5e-226 786.9 569 69.4
Thhalv10007218m.g Eutrema salsugineum HOM05D005597 ORTHO05D007304 3.6e-225 785.0 565 68.7
Ciclev10019496m.g Citrus clementina HOM05D005597 ORTHO05D007304 8.0e-225 783.9 566 69.1
BcaC07g38821 Brassica carinata HOM05D005597 ORTHO05D007304 1.0e-224 783.5 562 68.5
Sabra11G0098300 Salix brachista HOM05D005597 ORTHO05D007304 1.0e-224 783.5 617 66.1
BcaC05g25546 Brassica carinata HOM05D005597 ORTHO05D007304 3.1e-224 781.9 558 68.5
BolC8t49386H Brassica oleracea HOM05D005597 ORTHO05D007304 6.8e-224 780.8 550 68.5
CANSAT35G0471 Cannabis sativa HOM05D005597 ORTHO05D007304 1.3e-222 776.5 528 73.5
BcaB03g13027 Brassica carinata HOM05D005597 ORTHO05D007304 8.3e-222 773.9 544 68.8
PSO675G3712 Papaver somniferum HOM05D005597 ORTHO05D007304 1.1e-218 763.5 568 66.9
PSO500G0209 Papaver somniferum HOM05D005597 ORTHO05D007304 1.9e-218 762.7 568 66.7
ATR0602G238 Amborella trichopoda HOM05D005597 ORTHO05D007304 5.6e-218 761.1 571 67.8
FAN25G0069 Fragaria x ananassa HOM05D005597 ORTHO05D007304 5.6e-218 761.1 572 68.9
Haze_09335 Corylus avellana HOM05D005597 ORTHO05D007304 4.7e-217 758.1 479 78.1
Os01g0209000 Oryza sativa ssp. japonica HOM05D005597 ORTHO05D007304 3.2e-213 745.3 517 70.0
Aa31LG7G1320 Aethionema arabicum HOM05D005597 ORTHO05D007304 9.2e-213 743.8 543 68.7
unitig_749.g13539 Utricularia gibba HOM05D005597 ORTHO05D007304 2.7e-212 742.3 570 66.1
SalBow7G0883 Salvia bowleyana HOM05D005597 ORTHO05D007304 7.8e-212 740.7 494 73.7
Zm00001eb120330 Zea mays HOM05D005597 ORTHO05D007304 3.6e-209 731.9 564 65.8
AUR62019570 Chenopodium quinoa HOM05D005597 ORTHO05D007304 3.1e-200 702.2 553 65.1
Duzib213G0888 Durio zibethinus HOM05D005597 ORTHO05D007304 8.1e-193 677.6 446 73.5
DCAR_013152 Daucus carota HOM05D005597 ORTHO05D007304 4.2e-189 665.2 439 73.1
HPP92_004052 Vanilla planifolia HOM05D005597 ORTHO05D007304 1.3e-187 660.2 616 56.7
MELO3C025637.2 Cucumis melo HOM05D005597 ORTHO05D007304 3.3e-186 655.6 432 74.8
Peaxi162Scf00069g02235 Petunia axillaris HOM05D005597 ORTHO05D007304 1.6e-185 653.3 434 73.5
Hma1.2p1_1016F.1_g248140 Hydrangea macrophylla HOM05D005597 ORTHO05D007304 1.2e-183 647.1 431 77.3
Sc03g0010510 Simmondsia chinensis HOM05D005597 ORTHO05D007304 4.8e-177 625.2 439 71.8
Gohir.D13G153500 Gossypium hirsutum HOM05D005597 ORTHO05D007304 1.1e-176 624.0 406 73.6
Mapoly0059s0091 Marchantia polymorpha HOM05D005597 ORTHO05D007304 2.7e-164 582.8 523 56.6
Psat5g238320 Pisum sativum HOM05D005597 ORTHO05D007304 1.8e-163 580.1 424 70.8
Ah.06g185290 Amaranthus hybridus HOM05D005597 ORTHO05D007304 2.9e-158 562.8 434 67.1
Pp3c6_16240 Physcomitrium patens HOM05D005597 ORTHO05D007304 1.8e-144 516.9 577 49.2
Dinv18359 Davidia involucrata HOM05D005597 ORTHO05D007304 3.5e-143 512.7 368 75.0
AagrBONN_evm.TU.Sc2ySwM_228.833 Anthoceros agrestis HOM05D005597 ORTHO05D007304 2.1e-140 503.4 516 52.5
SMO143G0166 Selaginella moellendorffii HOM05D005597 ORTHO05D007304 6.7e-139 498.4 500 52.4
CBR_g38668 Chara braunii HOM05D005597 ORTHO05D007304 5.4e-112 409.1 568 41.5
SHI21382 Sapria himalayana HOM05D005597 ORTHO05D007304 2.0e-106 390.6 325 62.8
SHI21385 Sapria himalayana HOM05D000105 ORTHO05D000023 6.8e-83 312.4 222 65.3
Cpa.g.sc97.103 Carica papaya HOM05D005597 ORTHO05D007304 3.4e-82 310.1 213 75.1
Nitab4.5_0001145g0050 Nicotiana tabacum HOM05D005597 ORTHO05D007304 7.6e-82 308.9 276 63.4
Oeu059263.1 Olea europaea HOM05D005597 ORTHO05D007304 2.2e-81 307.4 383 48.0
SEGI_23731 Sequoiadendron giganteum HOM05D005597 ORTHO05D007304 1.9e-77 294.3 223 61.4
Nitab4.5_0000246g0240 Nicotiana tabacum HOM05D005597 ORTHO05D007304 1.2e-71 275.0 565 37.2
MCO07G083 Micromonas commoda HOM05D005597 ORTHO05D007304 1.6e-63 248.1 543 32.8
PRCOL_00005636 Prasinoderma coloniale HOM05D005597 ORTHO05D007304 1.4e-59 235.0 528 33.1
Actinidia09803 Actinidia chinensis HOM05D005597 ORTHO05D007304 1.7e-57 228.0 126 83.3
Cfa025275 Carpinus fangiana HOM05D005597 ORTHO05D028637 9.3e-56 222.2 506 32.6
Gohir.A07G160600 Gossypium hirsutum HOM05D005597 ORTHO05D007304 2.9e-49 200.7 132 76.5
Gohir.A04G098250 Gossypium hirsutum HOM05D005597 ORTHO05D007304 3.8e-49 200.3 132 75.8
Gohir.A03G066250 Gossypium hirsutum HOM05D005597 ORTHO05D007304 5.7e-45 186.4 120 77.5
Lsat_1_v5_gn_9_21740 Lactuca sativa HOM05D005597 ORTHO05D007174 2.8e-44 184.1 191 59.2
Atru.chr2.2170 Acer truncatum HOM05D005597 ORTHO05D007304 3.7e-44 183.7 95 83.2
COL.COLO4_17572 Corchorus olitorius HOM05D005597 ORTHO05D007304 5.1e-38 163.3 138 63.0
Actinidia24363 Actinidia chinensis HOM05D005597 ORTHO05D007304 2.2e-20 104.8 84 66.7
Lsat_1_v5_gn_3_114580 Lactuca sativa HOM05D002100 ORTHO05D002310 6.8e-14 83.2 59 76.3
Nn1g04407 Nelumbo nucifera HOM05D005597 ORTHO05D007304 3.4e-13 80.9 72 58.3
Potri.001G392050 Populus trichocarpa HOM05D005597 ORTHO05D007304 3.4e-13 80.9 47 78.7
MBI01_g45631_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D010488 1.8e-11 75.1 48 66.7
MBI01_g45400_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D010488 3.1e-11 74.3 38 81.6
Phvul.003G151000 Phaseolus vulgaris HOM05D005919 ORTHO05D007176 1.1e-08 65.9 385 24.4
VMungo1215G1350 Vigna mungo HOM05D005919 ORTHO05D007176 1.5e-08 65.5 385 24.4
ECA240G3021 Erigeron canadensis HOM05D005919 ORTHO05D007176 9.5e-08 62.8 295 26.8


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