Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 3.3e-167 591.7 301 100.0
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 4.8e-142 508.1 301 90.0
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 1.9e-127 459.5 298 81.2
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 2.5e-122 442.6 299 76.9
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 1.7e-115 419.9 263 79.8
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 1.0e-112 410.6 291 71.8
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 3.9e-112 408.7 302 71.5
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 1.7e-110 403.3 268 76.9
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 2.2e-110 402.9 300 72.3
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 2.8e-110 402.5 267 76.0
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 1.8e-109 399.8 294 72.4
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 1.8e-109 399.8 278 74.5
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 2.4e-109 399.4 292 71.2
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 2.4e-109 399.4 299 70.2
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 3.1e-109 399.1 301 70.1
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 2.6e-108 396.0 309 69.6
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 3.4e-108 395.6 294 70.1
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 4.5e-108 395.2 301 70.4
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 7.7e-108 394.4 295 69.5
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 1.0e-107 394.0 278 71.6
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 2.2e-107 392.9 306 68.6
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 5.0e-107 391.7 294 69.7
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 1.1e-106 390.6 260 75.8
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 1.1e-106 390.6 297 70.0
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 1.4e-106 390.2 294 69.4
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 1.9e-106 389.8 259 76.1
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 4.2e-106 388.7 301 67.4
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 1.6e-105 386.7 300 68.0
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 2.1e-105 386.3 243 78.2
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 1.8e-104 383.3 298 67.8
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 5.1e-104 381.7 296 70.9
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 8.8e-104 380.9 266 74.1
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 8.8e-104 380.9 296 70.9
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 8.8e-104 380.9 254 76.0
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 2.0e-103 379.8 282 69.1
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 3.3e-103 379.0 288 70.8
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 9.7e-103 377.5 296 69.3
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 1.3e-102 377.1 263 71.9
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 8.2e-102 374.4 288 64.9
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 1.4e-101 373.6 294 68.4
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 1.8e-101 373.2 261 71.3
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 2.4e-101 372.9 297 65.0
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 4.1e-101 372.1 275 69.8
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 5.3e-101 371.7 270 71.1
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 6.9e-101 371.3 293 68.9
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 6.9e-101 371.3 293 68.9
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 1.2e-100 370.5 246 74.0
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 1.2e-100 370.5 291 69.4
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 2.0e-100 369.8 304 65.8
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 2.0e-100 369.8 304 65.8
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 4.5e-100 368.6 264 71.6
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 7.7e-100 367.9 294 64.6
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 1.3e-99 367.1 281 70.1
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 3.8e-99 365.5 274 69.3
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 8.5e-99 364.4 265 69.1
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 2.5e-98 362.8 295 64.4
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 4.2e-98 362.1 258 70.5
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 4.2e-98 362.1 286 66.4
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 1.6e-97 360.1 291 67.7
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 8.0e-97 357.8 307 63.5
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 1.0e-96 357.5 284 65.1
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 1.0e-96 357.5 282 67.7
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 1.0e-96 357.5 272 71.0
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 3.9e-96 355.5 262 69.5
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 1.1e-95 354.0 282 66.0
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 9.7e-95 350.9 277 66.4
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 1.7e-94 350.1 258 68.2
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 1.7e-94 350.1 287 63.4
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 2.8e-94 349.4 255 66.3
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 4.8e-94 348.6 251 71.3
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 7.0e-93 344.7 275 69.1
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 1.6e-92 343.6 314 61.5
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 2.6e-92 342.8 292 64.7
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 1.0e-91 340.9 304 63.5
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 2.2e-91 339.7 264 66.3
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 5.0e-91 338.6 269 68.0
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 1.5e-90 337.0 266 66.5
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 8.0e-89 331.3 259 66.4
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 5.2e-88 328.6 225 74.2
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 4.4e-87 325.5 273 66.3
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 4.4e-87 325.5 259 66.0
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 7.5e-87 324.7 273 65.9
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 1.3e-86 323.9 266 66.5
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 2.2e-86 323.2 237 70.0
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 4.8e-86 322.0 273 63.4
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 8.5e-83 311.2 240 64.2
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 3.2e-82 309.3 251 62.5
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 7.2e-82 308.1 281 58.7
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 1.8e-80 303.5 241 64.3
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 3.0e-80 302.8 203 75.9
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 1.4e-77 293.9 231 66.7
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 7.7e-76 288.1 217 71.0
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 6.6e-75 285.0 221 65.6
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 3.4e-71 272.7 249 59.8
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 4.9e-70 268.9 195 70.3
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 4.1e-69 265.8 295 52.9
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.2e-60 237.7 296 51.7
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 6.6e-59 231.9 232 52.2
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 7.3e-58 228.4 228 53.1
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 1.4e-53 214.2 227 46.3
Nitab4.5_0001908g0040 Nicotiana tabacum HOM05D006923 ORTHO05D008697 4.9e-46 189.1 251 47.8
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 1.9e-45 187.2 135 69.6
MCO16G195 Micromonas commoda HOM05D006923 ORTHO05D008697 2.3e-43 180.3 236 39.8
Cre08.g382300 Chlamydomonas reinhardtii HOM05D006923 ORTHO05D008697 1.4e-40 171.0 228 39.0
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 1.9e-34 150.6 244 36.9
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 1.5e-31 141.0 89 74.2
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 9.9e-31 138.3 226 41.2
AagrBONN_evm.TU.Sc2ySwM_117.4092 Anthoceros agrestis HOM05D006923 ORTHO05D008697 2.9e-22 110.2 133 47.4
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 1.1e-18 98.2 84 57.1
MBI17_g35869_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 1.5e-15 87.8 103 48.5
Hma1.2p1_0289F.1_g114510 Hydrangea macrophylla HOM05D006923 ORTHO05D008697 2.6e-15 87.0 61 72.1
VMungo1215G3051 Vigna mungo HOM05D006923 ORTHO05D008697 3.8e-14 83.2 49 75.5
CiPaw.05G144000 Carya illinoinensis HOM05D006923 ORTHO05D008697 5.1e-11 72.8 103 46.6
A07p27760 Brassica napus HOM05D006923 ORTHO05D024228 1.6e-09 67.8 70 52.9
BraA07t30415Z Brassica rapa HOM05D006923 ORTHO05D024228 1.6e-09 67.8 70 52.9
BraA08t33759Z Brassica rapa HOM05D020796 ORTHO05D024228 2.1e-09 67.4 70 52.9
Rhsim13G0125100 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.1e-08 65.1 52 61.5
SEGI_22360 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 3.1e-08 63.5 52 51.9
Rhsim06G0079000 Rhododendron simsii HOM05D021265 ORTHO05D338543 1.0e-06 58.5 60 55.0
Rhsim03G0260900 Rhododendron simsii HOM05D021265 ORTHO05D339689 4.9e-06 56.2 65 46.2


User provided reference genes

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