Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003221 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.4e-62 241.9 114 100.0
CSS0006887 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 4.7e-58 227.6 114 91.2
CSS0013543 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 7.8e-53 210.3 114 87.7
CSS0002147 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.9e-52 208.0 114 88.6
CSS0015259 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.9e-52 208.0 118 84.7
CSS0023820 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 8.6e-52 206.8 114 86.0
CSS0010240 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.1e-49 198.4 114 80.7
CSS0023038 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.1e-49 198.4 116 83.6
CSS0004806 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.2e-48 196.4 114 80.7
CSS0033855 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 4.9e-39 164.5 108 66.7
CSS0006571 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 6.4e-39 164.1 108 66.7
CSS0028555 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.7e-37 158.7 112 63.4
CSS0009299 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.3e-36 156.4 112 63.4
CSS0016602 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.3e-36 156.4 108 65.7
CSS0037267 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.7e-36 156.0 112 63.4
CSS0004654 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 7.3e-35 150.6 108 61.1
CSS0030203 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 2.8e-34 148.7 108 63.9
Actinidia22184 Actinidia chinensis HOM05D000455 ORTHO05D000434 4.7e-34 147.9 114 62.3
CSS0019902 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.4e-33 146.4 108 63.0
CSS0014323 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.3e-31 139.8 105 61.9
CSS0013856 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.7e-31 139.4 107 59.8
Atru.chr2.576 Acer truncatum HOM05D000593 ORTHO05D000562 7.1e-30 134.0 113 57.5
Atru.chr4.890 Acer truncatum HOM05D000593 ORTHO05D000562 2.1e-29 132.5 100 61.0
Hma1.2p1_0179F.1_g079060 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 1.9e-27 125.9 103 57.3
CANSAT64G1746 Cannabis sativa HOM05D000593 ORTHO05D002268 1.6e-26 122.9 105 52.4
CANSAT64G1841 Cannabis sativa HOM05D000593 ORTHO05D002268 1.6e-26 122.9 105 52.4
MD10G1032900 Malus domestica HOM05D000593 ORTHO05D000562 1.6e-26 122.9 94 61.7
CANSAT54G0060 Cannabis sativa HOM05D003216 ORTHO05D002268 6.2e-26 120.9 105 49.5
CSS0005100 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 8.1e-26 120.6 108 55.6
MD05G1031400 Malus domestica HOM05D000593 ORTHO05D000562 8.1e-26 120.6 94 60.6
Atru.chr6.1396 Acer truncatum HOM05D000593 ORTHO05D000562 2.4e-25 119.0 95 57.9
Hma1.2p1_0622F.1_g190870 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 3.1e-25 118.6 103 55.3
Hma1.2p1_1172F.1_g263670 Hydrangea macrophylla HOM05D000593 ORTHO05D002268 4.0e-25 118.2 83 62.7
MD08G1164400 Malus domestica HOM05D000593 ORTHO05D000562 5.8e-24 114.4 105 49.5
TWI73G0339 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.8e-24 114.4 114 51.8
RcHm_v2.0_Chr1g0329481 Rosa chinensis HOM05D000593 ORTHO05D000562 1.3e-23 113.2 94 55.3
Rhsim01G0176400 Rhododendron simsii HOM05D003216 ORTHO05D002268 2.2e-23 112.5 108 48.1
Rhsim06G0090900 Rhododendron simsii HOM05D003216 ORTHO05D002268 2.2e-23 112.5 108 48.1
Atru.chr11.1014 Acer truncatum HOM05D000593 ORTHO05D000562 2.9e-23 112.1 108 50.0
Atru.chr1.3004 Acer truncatum HOM05D000593 ORTHO05D002268 3.8e-23 111.7 108 50.0
TWI14G0423 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.8e-23 111.7 93 51.6
FvH4_7g04391 Fragaria vesca HOM05D000593 ORTHO05D000562 8.4e-23 110.5 97 51.5
RcHm_v2.0_Chr7g0206311 Rosa chinensis HOM05D000593 ORTHO05D000562 1.1e-22 110.2 117 50.4
Lj6A78T35 Lonicera japonica HOM05D000011 ORTHO05D002639 3.2e-22 108.6 106 46.2
TWI53G1229 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 3.2e-22 108.6 94 48.9
TWI15G1236 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.6e-21 106.3 94 47.9
Atru.chr11.19 Acer truncatum HOM05D000593 ORTHO05D000562 1.3e-20 103.2 95 49.5
Atru.chr11.22 Acer truncatum HOM05D000593 ORTHO05D000562 1.3e-20 103.2 95 49.5
RcHm_v2.0_Chr7g0206281 Rosa chinensis HOM05D000593 ORTHO05D002268 4.3e-19 98.2 75 61.3
TWI74G1657 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 4.8e-18 94.7 109 44.0
TWI75G1634 Tripterygium wilfordii HOM05D003216 ORTHO05D002268 8.1e-18 94.0 108 41.7
TWI38G0345 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.1e-17 93.6 94 45.7
CANSAT01G1396 Cannabis sativa HOM05D000593 ORTHO05D000562 3.1e-17 92.0 71 57.7
TWI75G1234 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.1e-17 92.0 111 36.9
TWI73G0826 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.0e-17 91.7 93 45.2
TWI38G0080 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 6.9e-17 90.9 94 41.5
TWI73G0077 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 6.9e-17 90.9 109 42.2
FvH4_5g13892 Fragaria vesca HOM05D000593 ORTHO05D002268 9.0e-17 90.5 99 46.5
TWI63G1264 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.4e-16 88.6 112 40.2
Aqoxy1G00859 Aquilegia oxysepala HOM05D003216 ORTHO05D002268 5.8e-16 87.8 105 41.0
Aqoxy5G01684 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 5.8e-16 87.8 105 41.0
TWI09G0326 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 7.6e-16 87.4 93 43.0
TWI15G0761 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 9.9e-16 87.0 71 56.3
TWI12G0364 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.3e-15 86.7 86 48.8
TWI31G0828 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.7e-15 86.3 93 44.1
TWI63G0793 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.7e-15 86.3 112 39.3
TWI75G0671 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.7e-15 86.3 112 39.3
TWI23G0100 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 2.2e-15 85.9 93 45.2
Phvul.008G000100 Phaseolus vulgaris HOM05D000593 ORTHO05D000562 4.9e-15 84.7 95 46.3
TWI59G1482 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 6.4e-15 84.3 93 44.1
Ca_05375_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 8.4e-15 84.0 92 44.6
FvH4_4g16652 Fragaria vesca HOM05D000593 ORTHO05D000562 1.4e-14 83.2 95 44.2
TWI56G1292 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 7.1e-14 80.9 112 35.7
FvH4_7g19111 Fragaria vesca HOM05D000593 ORTHO05D002268 9.3e-14 80.5 119 42.9
vmacro14527 Vaccinium macrocarpon HOM05D000593 ORTHO05D002268 9.3e-14 80.5 97 44.3
vmacro21289 Vaccinium macrocarpon HOM05D000593 ORTHO05D002268 9.3e-14 80.5 97 44.3
FvH4_6g23211 Fragaria vesca HOM05D000045 ORTHO05D009940 1.2e-13 80.1 119 42.9
CSS0038546 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.6e-13 79.7 113 38.1
TWI81G0406 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.6e-13 79.7 93 43.0
CSS0044639 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.1e-13 79.3 113 37.2
Ca_10000_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 2.1e-13 79.3 92 44.6
CSS0017978 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.7e-13 79.0 113 38.1
TWI31G0531 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 2.7e-13 79.0 102 43.1
TWI63G0981 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 2.7e-13 79.0 111 36.0
GSVIVG01023955001 Vitis vinifera HOM05D000593 ORTHO05D000562 2.7e-13 79.0 57 61.4
TWI73G0096 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.6e-13 78.2 94 40.4
Ca_14497_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 6.0e-13 77.8 100 37.0
TWI38G1252 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 6.0e-13 77.8 93 40.9
TWI75G0109 Tripterygium wilfordii HOM05D003216 ORTHO05D002268 6.0e-13 77.8 93 38.7
Ca_11910_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.3e-12 76.6 100 38.0
FvH4_6g12551 Fragaria vesca HOM05D000593 ORTHO05D002268 1.3e-12 76.6 94 45.7
TWI36G1645 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 1.3e-12 76.6 93 43.0
CSS0009535 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.3e-12 75.9 114 37.7
Ca_13826_v3 Cicer arietinum L. HOM05D000593 ORTHO05D004526 2.3e-12 75.9 73 49.3
PSO190G0002 Papaver somniferum HOM05D013875 ORTHO05D002268 2.3e-12 75.9 99 38.4
PSO601G0026 Papaver somniferum HOM05D013875 ORTHO05D002268 2.3e-12 75.9 99 38.4
PSO729G0107 Papaver somniferum HOM05D013875 ORTHO05D002268 3.0e-12 75.5 99 38.4
TWI81G0284 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 3.0e-12 75.5 80 47.5
TWI32G0254 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 3.9e-12 75.1 94 38.3
EL10Ac9g21154 Beta vulgaris HOM05D000593 ORTHO05D000562 5.1e-12 74.7 93 40.9
FvH4_5g20623 Fragaria vesca HOM05D000593 ORTHO05D000562 5.1e-12 74.7 119 38.7
TPR.G40224 Trifolium pratense HOM05D003216 ORTHO05D002268 1.9e-11 72.8 93 39.8
CSS0040938 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.5e-11 72.4 113 37.2
FvH4_6g38841 Fragaria vesca HOM05D003216 ORTHO05D002268 2.5e-11 72.4 91 45.1
TWI31G0510 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 2.5e-11 72.4 81 45.7
Ca_07608_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002268 3.3e-11 72.0 92 38.0
Ca_14741_v3 Cicer arietinum L. HOM05D003326 ORTHO05D001185 3.3e-11 72.0 92 38.0
FvH4_5g25511 Fragaria vesca HOM05D000593 ORTHO05D000562 3.3e-11 72.0 122 38.5
CSS0003309 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 7.4e-11 70.9 113 36.3
Oeu064531.1 Olea europaea HOM05D000593 ORTHO05D002268 7.4e-11 70.9 56 62.5
SGA_v2.0_scaffold106G30618 Striga asiatica HOM05D000593 ORTHO05D002268 1.3e-10 70.1 91 39.6
SGA_v2.0_scaffold126G33866 Striga asiatica HOM05D000593 ORTHO05D002268 1.3e-10 70.1 91 39.6
SGA_v2.0_scaffold17G08149 Striga asiatica HOM05D000593 ORTHO05D002268 1.3e-10 70.1 91 39.6
SGA_v2.0_scaffold1G00721 Striga asiatica HOM05D000593 ORTHO05D002268 1.3e-10 70.1 91 39.6
SGA_v2.0_scaffold22G09752 Striga asiatica HOM05D000593 ORTHO05D002268 1.3e-10 70.1 91 39.6
SGA_v2.0_scaffold286G47098 Striga asiatica HOM05D000164 ORTHO05D000096 1.3e-10 70.1 91 39.6
SGA_v2.0_scaffold31G12776 Striga asiatica HOM05D000593 ORTHO05D002268 1.3e-10 70.1 91 39.6
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 1.3e-10 70.1 91 39.6
Ca_25321_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.6e-10 69.7 92 37.0
TWI38G0853 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.6e-10 69.7 59 47.5
CSS0038609 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 4.8e-10 68.2 113 34.5
Atru.chr3.1390 Acer truncatum HOM05D000593 ORTHO05D000562 6.2e-10 67.8 58 56.9
TWI81G0336 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 6.2e-10 67.8 80 43.8
Ca_11017_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 1.4e-09 66.6 95 35.8
Aqoxy3G00378 Aquilegia oxysepala HOM05D003216 ORTHO05D002268 1.8e-09 66.2 109 35.8
Aqoxy1G03120 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 2.4e-09 65.9 111 32.4
HanXRQChr05g0151291 Helianthus annuus HOM05D000593 ORTHO05D000562 2.4e-09 65.9 101 34.7
TPR.G40729 Trifolium pratense HOM05D003216 ORTHO05D002268 2.4e-09 65.9 99 35.4
Atru.chr7.1886 Acer truncatum HOM05D000593 ORTHO05D000562 3.1e-09 65.5 55 56.4
PSO729G0006 Papaver somniferum HOM05D013875 ORTHO05D002268 3.1e-09 65.5 106 35.8
PSO729G0017 Papaver somniferum HOM05D013875 ORTHO05D002268 3.1e-09 65.5 93 36.6
PSO210G1587 Papaver somniferum HOM05D003216 ORTHO05D002268 4.0e-09 65.1 94 35.1
Oeu028054.1 Olea europaea HOM05D000593 ORTHO05D002268 5.3e-09 64.7 56 55.4
Atru.chr9.1259 Acer truncatum HOM05D000593 ORTHO05D002268 6.9e-09 64.3 58 53.4
Medtr8g446690 Medicago truncatula HOM05D003216 ORTHO05D002268 6.9e-09 64.3 97 35.1
TWI59G0546 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 6.9e-09 64.3 67 47.8
TWI59G1088 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 9.0e-09 63.9 77 39.0
Medtr2g461120 Medicago truncatula HOM05D003216 ORTHO05D002268 1.5e-08 63.2 90 40.0
Medtr8g020437 Medicago truncatula HOM05D003216 ORTHO05D002268 1.5e-08 63.2 96 33.3
Aqoxy7G02090 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 2.0e-08 62.8 76 38.2
HanXRQChr08g0232231 Helianthus annuus HOM05D000593 ORTHO05D000562 3.4e-08 62.0 112 28.6
HanXRQChr13g0412791 Helianthus annuus HOM05D000593 ORTHO05D000562 3.4e-08 62.0 112 28.6
HanXRQChr15g0467831 Helianthus annuus HOM05D000593 ORTHO05D000562 3.4e-08 62.0 112 28.6
Gorai.006G065500 Gossypium raimondii HOM05D000593 ORTHO05D000562 4.5e-08 61.6 94 34.0
Oeu035640.1 Olea europaea HOM05D000593 ORTHO05D000562 7.6e-08 60.8 56 53.6
PSO339G0458 Papaver somniferum HOM05D000593 ORTHO05D002268 9.9e-08 60.5 94 34.0
ECA246G0789 Erigeron canadensis HOM05D004279 ORTHO05D004979 1.3e-07 60.1 89 40.4
TWI56G0917 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.3e-07 60.1 60 50.0
Medtr7g029645 Medicago truncatula HOM05D003216 ORTHO05D002268 1.7e-07 59.7 96 32.3
vmacro11426 Vaccinium macrocarpon HOM05D000455 ORTHO05D000434 1.7e-07 59.7 57 43.9
TWI36G1263 Tripterygium wilfordii HOM05D003216 ORTHO05D002268 2.2e-07 59.3 74 32.4
ECA240G3759 Erigeron canadensis HOM05D000593 ORTHO05D002268 2.9e-07 58.9 89 39.3
Medtr1g035110 Medicago truncatula HOM05D003216 ORTHO05D002268 3.8e-07 58.5 96 32.3
TPR.G20359 Trifolium pratense HOM05D003216 ORTHO05D002268 3.8e-07 58.5 99 37.4
FAN12G0941 Fragaria x ananassa HOM05D000593 ORTHO05D002268 4.9e-07 58.2 65 43.1
Medtr3g463860 Medicago truncatula HOM05D003216 ORTHO05D002268 4.9e-07 58.2 96 38.5
ECA247G1059 Erigeron canadensis HOM05D000593 ORTHO05D002268 6.4e-07 57.8 89 39.3
Medtr5g062340 Medicago truncatula HOM05D003216 ORTHO05D002268 6.4e-07 57.8 96 30.2
CSS0025640 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 8.4e-07 57.4 113 33.6
Medtr2g096070 Medicago truncatula HOM05D003216 ORTHO05D002268 1.1e-06 57.0 95 32.6
Ca_15409_v3 Cicer arietinum L. HOM05D000768 ORTHO05D000665 1.4e-06 56.6 57 45.6
Ca_29880_v3 Cicer arietinum L. HOM05D000768 ORTHO05D000665 1.4e-06 56.6 57 45.6
TPR.G28459 Trifolium pratense HOM05D003216 ORTHO05D002268 1.4e-06 56.6 96 36.5
Medtr1g036180 Medicago truncatula HOM05D003216 ORTHO05D002268 1.9e-06 56.2 91 35.2
TPR.G22653 Trifolium pratense HOM05D003216 ORTHO05D002268 1.9e-06 56.2 72 38.9
TAR485G0003 Trochodendron aralioides HOM05D003216 ORTHO05D002268 4.2e-06 55.1 30 80.0
ECA247G1992 Erigeron canadensis HOM05D000710 ORTHO05D000336 5.5e-06 54.7 74 41.9


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