Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003209 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 3.0e-73 278.5 146 100.0
Rhsim03G0192100 Rhododendron simsii HOM05D006253 ORTHO05D007666 1.3e-60 236.5 142 84.5
Rhsim05G0084000 Rhododendron simsii HOM05D006253 ORTHO05D007666 3.8e-60 235.0 142 84.5
Actinidia12952 Actinidia chinensis HOM05D006253 ORTHO05D007666 4.9e-60 234.6 143 87.4
Manes.01G064000 Manihot esculenta HOM05D006253 ORTHO05D007666 1.4e-59 233.0 142 85.9
TAR376G0695 Trochodendron aralioides HOM05D006253 ORTHO05D007666 1.9e-59 232.6 142 84.5
CiPaw.05G006400 Carya illinoinensis HOM05D006253 ORTHO05D007666 1.2e-58 229.9 142 83.1
Sc14g0002650 Simmondsia chinensis HOM05D006253 ORTHO05D007666 2.7e-58 228.8 142 82.4
COL.COLO4_32658 Corchorus olitorius HOM05D006253 ORTHO05D007666 1.0e-57 226.9 141 82.3
Lj5C209T13 Lonicera japonica HOM05D006253 ORTHO05D007666 1.0e-57 226.9 141 81.6
Hma1.2p1_0370F.1_g137800 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 2.3e-57 225.7 142 81.0
Gohir.A01G006900 Gossypium hirsutum HOM05D006253 ORTHO05D007666 3.0e-57 225.3 142 81.7
Thecc.02G100600 Theobroma cacao HOM05D006253 ORTHO05D007666 3.9e-57 224.9 142 81.7
Gorai.002G008000 Gossypium raimondii HOM05D006253 ORTHO05D007666 5.1e-57 224.6 142 81.7
Potri.004G141400 Populus trichocarpa HOM05D006253 ORTHO05D007666 5.1e-57 224.6 143 83.2
QL11p035967 Quercus lobata HOM05D006253 ORTHO05D007666 6.7e-57 224.2 142 81.7
GSVIVG01031749001 Vitis vinifera HOM05D006253 ORTHO05D007666 1.1e-56 223.4 141 81.6
CANSAT25G0326 Cannabis sativa HOM05D006253 ORTHO05D007666 3.3e-56 221.9 141 80.1
CANSAT35G0887 Cannabis sativa HOM05D006253 ORTHO05D007666 3.3e-56 221.9 141 80.1
Sabra04G0093200 Salix brachista HOM05D006253 ORTHO05D007666 4.3e-56 221.5 143 81.1
Nn5g30328 Nelumbo nucifera HOM05D006253 ORTHO05D007666 5.6e-56 221.1 142 81.7
Sed0027718 Sechium edule HOM05D006253 ORTHO05D007666 7.4e-56 220.7 142 78.9
Gohir.D01G007000 Gossypium hirsutum HOM05D006253 ORTHO05D007666 1.3e-55 219.9 142 80.3
MD05G1080500 Malus domestica HOM05D006253 ORTHO05D007666 1.3e-55 219.9 144 79.2
Glyma.06G172100 Glycine max HOM05D006253 ORTHO05D007666 2.8e-55 218.8 145 77.2
Prupe.8G124200 Prunus persica HOM05D006253 ORTHO05D007666 2.8e-55 218.8 144 79.2
VMungo1080G0444 Vigna mungo HOM05D006253 ORTHO05D007666 3.7e-55 218.4 142 79.6
Glyma.04G194000 Glycine max HOM05D006253 ORTHO05D007666 4.8e-55 218.0 142 79.6
Lj6g0019810 Lotus japonicus HOM05D006253 ORTHO05D007666 6.2e-55 217.6 142 77.5
MELO3C019508.2 Cucumis melo HOM05D006253 ORTHO05D007666 1.4e-54 216.5 142 78.2
RcHm_v2.0_Chr6g0257111 Rosa chinensis HOM05D006253 ORTHO05D007666 1.4e-54 216.5 144 77.1
CsaV3_3G018580 Cucumis sativus L. HOM05D006253 ORTHO05D007666 2.4e-54 215.7 142 78.2
arahy.Tifrunner.gnm1.ann1.ETD7FQ Arachis hypogaea HOM05D006253 ORTHO05D007666 4.0e-54 214.9 142 77.5
HanXRQChr16g0501301 Helianthus annuus HOM05D006253 ORTHO05D007666 4.0e-54 214.9 142 77.5
FvH4_2g06110 Fragaria vesca HOM05D006253 ORTHO05D007666 5.3e-54 214.5 144 77.1
FAN24G2487 Fragaria x ananassa HOM05D006253 ORTHO05D007666 5.3e-54 214.5 144 77.1
PSO782G1871 Papaver somniferum HOM05D006253 ORTHO05D007666 5.3e-54 214.5 142 78.9
Ciclev10029390m.g Citrus clementina HOM05D006253 ORTHO05D007666 9.0e-54 213.8 143 78.3
CAN.G1041.15 Capsicum annuum HOM05D006253 ORTHO05D007666 1.2e-53 213.4 142 75.4
Sopen01g050480 Solanum pennellii HOM05D006253 ORTHO05D007666 1.2e-53 213.4 142 76.1
PGSC0003DMG400025894 Solanum tuberosum HOM05D006253 ORTHO05D007666 1.5e-53 213.0 142 76.1
Ca_15796_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 2.6e-53 212.2 142 78.2
Ca_30406_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 2.6e-53 212.2 142 78.2
Lalb_Chr25g0286231 Lupinus albus HOM05D006253 ORTHO05D007666 4.5e-53 211.5 142 74.6
Oeu010588.1 Olea europaea HOM05D006253 ORTHO05D007666 4.5e-53 211.5 142 76.8
Phvul.005G182700 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 2.2e-52 209.1 142 76.1
SGA_v2.0_scaffold22G09667 Striga asiatica HOM05D006253 ORTHO05D007666 2.9e-52 208.8 141 75.2
arahy.Tifrunner.gnm1.ann1.AJN977 Arachis hypogaea HOM05D006253 ORTHO05D007666 3.8e-52 208.4 142 74.6
TWI79G0152 Tripterygium wilfordii HOM05D006253 ORTHO05D007666 3.8e-52 208.4 143 76.9
Ca_01013_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 8.4e-52 207.2 138 76.8
TPR.G19178 Trifolium pratense HOM05D006253 ORTHO05D007666 8.4e-52 207.2 142 73.9
Lsat_1_v5_gn_5_112681 Lactuca sativa HOM05D006253 ORTHO05D007666 1.1e-51 206.8 137 75.9
FAN27G3246 Fragaria x ananassa HOM05D006253 ORTHO05D007666 1.4e-51 206.5 149 72.5
TPR.G19494 Trifolium pratense HOM05D006253 ORTHO05D007666 1.4e-51 206.5 140 76.4
MSTRG.27724 Avicennia marina HOM05D006253 ORTHO05D007666 2.4e-51 205.7 142 74.6
Eucgr.I01155 Eucalyptus grandis HOM05D006253 ORTHO05D007666 3.2e-51 205.3 143 76.9
THA.LOC104807358 Tarenaya hassleriana HOM05D006253 ORTHO05D007666 3.2e-51 205.3 142 74.6
EL10Ac5g11497 Beta vulgaris HOM05D006253 ORTHO05D007666 9.3e-51 203.8 141 73.0
PGR142G1116 Punica granatum HOM05D006253 ORTHO05D007666 3.5e-50 201.8 143 74.8
CDE08G0295 Ceratophyllum demersum HOM05D006253 ORTHO05D007666 4.6e-50 201.4 142 73.2
arahy.Tifrunner.gnm1.ann1.5N1458 Arachis hypogaea HOM05D006253 ORTHO05D007666 6.0e-50 201.1 163 66.9
ECA234G4670 Erigeron canadensis HOM05D006253 ORTHO05D007666 3.0e-49 198.7 142 71.8
Sp7g32200 Schrenkiella parvula HOM05D006253 ORTHO05D007666 2.8e-47 192.2 142 73.2
HPP92_001047 Vanilla planifolia HOM05D006253 ORTHO05D007666 3.7e-47 191.8 142 70.4
Aa31LG2G16330 Aethionema arabicum HOM05D006253 ORTHO05D007666 4.8e-47 191.4 142 71.1
Duzib052G0633 Durio zibethinus HOM05D006253 ORTHO05D007666 8.2e-47 190.7 114 85.1
Zm00001eb124670 Zea mays HOM05D006253 ORTHO05D007666 8.2e-47 190.7 134 73.1
arahy.Tifrunner.gnm1.ann1.1E2X9I Arachis hypogaea HOM05D006253 ORTHO05D007666 1.4e-46 189.9 120 80.0
Medtr8g099835 Medicago truncatula HOM05D006253 ORTHO05D007666 3.1e-46 188.7 119 81.5
Os01g0142200 Oryza sativa ssp. japonica HOM05D006253 ORTHO05D007666 3.1e-46 188.7 134 71.6
AT4G34412 Arabidopsis thaliana HOM05D006253 ORTHO05D007666 1.2e-45 186.8 142 69.7
Carub.0007s0590 Capsella rubella HOM05D006253 ORTHO05D007666 1.2e-45 186.8 142 69.0
HanXRQChr10g0319791 Helianthus annuus HOM05D006253 ORTHO05D007666 2.6e-45 185.7 120 79.2
C07p60590 Brassica napus HOM05D006253 ORTHO05D007666 3.4e-45 185.3 142 69.7
Thhalv10026394m.g Eutrema salsugineum HOM05D006253 ORTHO05D007666 5.8e-45 184.5 142 68.3
BraA03t15367Z Brassica rapa HOM05D006253 ORTHO05D007666 7.6e-45 184.1 142 69.7
A01p04020 Brassica napus HOM05D006253 ORTHO05D007666 1.3e-44 183.3 142 70.4
Solyc01g108260.4 Solanum lycopersicum HOM05D006253 ORTHO05D007666 1.3e-44 183.3 119 78.2
BcaNung06978 Brassica carinata HOM05D006253 ORTHO05D007666 1.7e-44 183.0 142 69.7
CARHR242350 Cardamine hirsuta HOM05D006253 ORTHO05D007666 1.7e-44 183.0 142 67.6
AL7G16840 Arabidopsis lyrata HOM05D006253 ORTHO05D007666 2.9e-44 182.2 134 70.9
PSO478G4849 Papaver somniferum HOM05D006253 ORTHO05D007666 6.5e-44 181.0 114 83.3
MBI02_g02992_MAGBIO Magnolia biondii HOM05D006253 ORTHO05D007666 1.4e-43 179.9 114 82.5
Psat5g098280 Pisum sativum HOM05D006253 ORTHO05D007666 1.9e-43 179.5 114 79.8
DCAR_007862 Daucus carota HOM05D006253 ORTHO05D007666 3.2e-43 178.7 114 78.1
Atru.chr5.2705 Acer truncatum HOM05D006253 ORTHO05D007666 1.2e-42 176.8 143 69.9
FAN20G2826 Fragaria x ananassa HOM05D006253 ORTHO05D007666 1.6e-42 176.4 133 68.4
AagrBONN_evm.TU.Sc2ySwM_344.4457 Anthoceros agrestis HOM05D006253 ORTHO05D007666 1.9e-40 169.5 134 60.4
AUR62029937 Chenopodium quinoa HOM05D006253 ORTHO05D007666 1.9e-40 169.5 118 72.9
Sed0021593 Sechium edule HOM05D006253 ORTHO05D007666 1.3e-39 166.8 142 62.7
SEGI_00233 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 3.7e-39 165.2 117 71.8
Mapoly0083s0082 Marchantia polymorpha HOM05D006253 ORTHO05D007666 8.2e-39 164.1 134 58.2
Pp3c22_3990 Physcomitrium patens HOM05D006253 ORTHO05D007666 6.9e-38 161.0 134 59.7
BolC7t46489H Brassica oleracea HOM05D003825 ORTHO05D004491 9.0e-38 160.6 119 70.6
SMO351G0094 Selaginella moellendorffii HOM05D006253 ORTHO05D007666 1.2e-37 160.2 135 60.7
Hund00335 Selenicereus undatus HOM05D006253 ORTHO05D007666 7.7e-37 157.5 141 63.1
MD10G1094500 Malus domestica HOM05D006253 ORTHO05D007666 2.1e-34 149.4 101 74.3
BolC1t00422H Brassica oleracea HOM05D006253 ORTHO05D007666 2.3e-33 146.0 113 70.8
CBR_g38557 Chara braunii HOM05D006253 ORTHO05D007666 2.3e-33 146.0 134 56.0
Medtr2g105210 Medicago truncatula HOM05D006253 ORTHO05D007666 5.1e-33 144.8 97 76.3
C01p04340 Brassica napus HOM05D006253 ORTHO05D007666 1.1e-30 137.1 97 75.3
FAN15G3440 Fragaria x ananassa HOM05D006253 ORTHO05D007666 1.8e-30 136.3 142 55.6
CSS0033941 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 4.5e-29 131.7 109 72.5
AUR62033746 Chenopodium quinoa HOM05D006253 ORTHO05D007666 5.9e-29 131.3 93 72.0
Phvul.002G266500 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 2.7e-26 122.5 81 74.1
A03p62890 Brassica napus HOM05D000211 ORTHO05D007666 1.3e-23 113.6 87 69.0
Gorai.005G238200 Gossypium raimondii HOM05D006253 ORTHO05D007666 5.3e-22 108.2 105 57.1
MCO10G211 Micromonas commoda HOM05D006253 ORTHO05D007666 5.9e-21 104.8 120 45.0
vmacro19500 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 5.0e-20 101.7 127 52.8
Cre01.g030950 Chlamydomonas reinhardtii HOM05D006253 ORTHO05D007666 1.9e-19 99.8 125 42.4
vmacro06019 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 3.6e-18 95.5 56 83.9
Prupe.4G258000 Prunus persica HOM05D006253 ORTHO05D007666 6.1e-18 94.7 79 64.6
Prupe.6G016400 Prunus persica HOM05D006253 ORTHO05D007666 1.8e-17 93.2 108 51.9
Gohir.D02G210201 Gossypium hirsutum HOM05D006253 ORTHO05D007666 2.0e-16 89.7 105 52.4
Cc02_g18770 Coffea canephora HOM05D006253 ORTHO05D007666 2.6e-16 89.4 59 74.6
PRCOL_00001305 Prasinoderma coloniale HOM05D006253 ORTHO05D007666 1.7e-15 86.7 145 37.9
ClCG05G009990 Citrullus lanatus HOM05D006253 ORTHO05D007666 3.7e-15 85.5 115 46.1
Aqoxy5G01240 Aquilegia oxysepala HOM05D006253 ORTHO05D007666 1.6e-13 80.1 56 66.1
SalBow3G2580 Salvia bowleyana HOM05D006253 ORTHO05D007666 7.7e-13 77.8 90 50.0
Oeu025576.2 Olea europaea HOM05D006253 ORTHO05D007666 3.8e-12 75.5 63 65.1
Ah.10g034240 Amaranthus hybridus HOM05D006253 ORTHO05D007666 5.0e-12 75.1 56 67.9
Prupe.2G172700 Prunus persica HOM05D006253 ORTHO05D007666 8.5e-12 74.3 51 74.5
Sabra09G0078100 Salix brachista HOM05D006253 ORTHO05D007666 2.7e-10 69.3 67 61.2
Migut.N01189 Erythranthe guttata HOM05D006253 ORTHO05D007666 1.4e-09 67.0 47 74.5
Hma1.2p1_0804F.1_g221060 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 5.2e-09 65.1 43 76.7
Prupe.4G259300 Prunus persica HOM05D006253 ORTHO05D007666 3.7e-07 58.9 38 71.1


User provided reference genes

Program Settings