Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003201 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 2.5e-30 134.8 68 100.0
Dinv21772 Davidia involucrata HOM05D003877 ORTHO05D004647 1.0e-15 86.3 62 69.4
Dinv10589 Davidia involucrata HOM05D003877 ORTHO05D004647 2.9e-15 84.7 61 68.9
CSS0042673 Camellia sinensis var. sinensis HOM05D003877 ORTHO05D004647 1.1e-14 82.8 61 65.6
Actinidia29719 Actinidia chinensis HOM05D003877 ORTHO05D004647 5.5e-14 80.5 62 64.5
MD01G1157500 Malus domestica HOM05D003877 ORTHO05D004647 3.6e-13 77.8 62 62.9
Nitab4.5_0000789g0120 Nicotiana tabacum HOM05D003877 ORTHO05D004647 3.6e-13 77.8 66 62.1
Prupe.2G255400 Prunus persica HOM05D003877 ORTHO05D004647 4.7e-13 77.4 59 62.7
TWI09G1304 Tripterygium wilfordii HOM05D003877 ORTHO05D004647 8.0e-13 76.6 45 75.6
TWI73G0349 Tripterygium wilfordii HOM05D003877 ORTHO05D004647 1.0e-12 76.3 68 60.3
FvH4_7g25060 Fragaria vesca HOM05D003877 ORTHO05D004647 1.4e-12 75.9 60 63.3
FAN06G1542 Fragaria x ananassa HOM05D003877 ORTHO05D004647 1.4e-12 75.9 60 63.3
Nitab4.5_0003391g0120 Nicotiana tabacum HOM05D003877 ORTHO05D004647 1.4e-12 75.9 60 60.0
QL08p063706 Quercus lobata HOM05D003877 ORTHO05D004647 1.4e-12 75.9 59 64.4
TPR.G30156 Trifolium pratense HOM05D003877 ORTHO05D004647 1.4e-12 75.9 67 56.7
Ah.10g036260 Amaranthus hybridus HOM05D003877 ORTHO05D004647 1.8e-12 75.5 60 60.0
Prupe.6G130900 Prunus persica HOM05D003877 ORTHO05D004647 2.3e-12 75.1 62 61.3
TPR.G5048 Trifolium pratense HOM05D003877 ORTHO05D004647 2.3e-12 75.1 67 56.7
Psat5g130920 Pisum sativum HOM05D003877 ORTHO05D004647 4.0e-12 74.3 65 58.5
Hund13891 Selenicereus undatus HOM05D003877 ORTHO05D004647 4.0e-12 74.3 62 61.3
EL10Ac2g04887 Beta vulgaris HOM05D003877 ORTHO05D004647 5.2e-12 73.9 60 58.3
CAN.G1268.9 Capsicum annuum HOM05D003877 ORTHO05D004647 8.8e-12 73.2 60 60.0
Phvul.006G048800 Phaseolus vulgaris HOM05D003877 ORTHO05D004647 8.8e-12 73.2 61 54.1
Lj6g0018000 Lotus japonicus HOM05D003877 ORTHO05D004647 1.2e-11 72.8 65 53.8
Medtr3g071580 Medicago truncatula HOM05D003877 ORTHO05D004647 1.2e-11 72.8 62 59.7
Ca_15152_v3 Cicer arietinum L. HOM05D003877 ORTHO05D004647 1.5e-11 72.4 60 55.0
FAN01G0819 Fragaria x ananassa HOM05D003877 ORTHO05D004647 2.0e-11 72.0 60 58.3
FAN10G2809 Fragaria x ananassa HOM05D003877 ORTHO05D004647 2.0e-11 72.0 60 58.3
Gohir.A06G161800 Gossypium hirsutum HOM05D003877 ORTHO05D004647 2.6e-11 71.6 62 58.1
Gohir.D06G167400 Gossypium hirsutum HOM05D003877 ORTHO05D004647 2.6e-11 71.6 62 58.1
vmacro10004 Vaccinium macrocarpon HOM05D003877 ORTHO05D004647 2.6e-11 71.6 64 56.2
TAR633G0464 Trochodendron aralioides HOM05D003877 ORTHO05D004647 3.4e-11 71.2 65 58.5
Duzib106G1591 Durio zibethinus HOM05D003877 ORTHO05D004647 5.7e-11 70.5 61 59.0
Rhsim03G0146600 Rhododendron simsii HOM05D003877 ORTHO05D004647 5.7e-11 70.5 62 62.9
FAN03G0426 Fragaria x ananassa HOM05D003877 ORTHO05D004647 7.5e-11 70.1 60 58.3
Thecc.10G011300 Theobroma cacao HOM05D003877 ORTHO05D004647 7.5e-11 70.1 59 61.0
Gorai.010G195300 Gossypium raimondii HOM05D003877 ORTHO05D004647 9.8e-11 69.7 62 56.5
Hund15887 Selenicereus undatus HOM05D003877 ORTHO05D004647 9.8e-11 69.7 59 59.3
Oeu056656.1 Olea europaea HOM05D003877 ORTHO05D004647 1.3e-10 69.3 64 53.1
Aqoxy2G01450 Aquilegia oxysepala HOM05D003877 ORTHO05D004647 1.7e-10 68.9 65 49.2
DCAR_011841 Daucus carota HOM05D003877 ORTHO05D004647 1.7e-10 68.9 60 60.0
Eucgr.G03086 Eucalyptus grandis HOM05D003877 ORTHO05D004647 1.7e-10 68.9 62 50.0
Lj1C785G15 Lonicera japonica HOM05D003877 ORTHO05D004647 1.7e-10 68.9 65 52.3
Solyc05g052480.4 Solanum lycopersicum HOM05D003877 ORTHO05D004647 1.7e-10 68.9 60 58.3
Sopen05g031010 Solanum pennellii HOM05D003877 ORTHO05D004647 1.7e-10 68.9 60 58.3
TAR623G0028 Trochodendron aralioides HOM05D003877 ORTHO05D004647 1.7e-10 68.9 59 57.6
PGSC0003DMG400027120 Solanum tuberosum HOM05D003877 ORTHO05D004647 2.2e-10 68.6 60 56.7
Aqoxy1G01313 Aquilegia oxysepala HOM05D003877 ORTHO05D004647 2.8e-10 68.2 48 58.3
Migut.F00639 Erythranthe guttata HOM05D003877 ORTHO05D004647 2.8e-10 68.2 60 60.0
HanXRQChr08g0221971 Helianthus annuus HOM05D003877 ORTHO05D004647 3.7e-10 67.8 65 56.9
Nitab4.5_0005049g0030 Nicotiana tabacum HOM05D003877 ORTHO05D004647 3.7e-10 67.8 61 54.1
Glyma.18G024700 Glycine max HOM05D003877 ORTHO05D004647 4.8e-10 67.4 62 56.5
Nitab4.5_0000058g0130 Nicotiana tabacum HOM05D003877 ORTHO05D004647 4.8e-10 67.4 65 52.3
PSO349G0168 Papaver somniferum HOM05D003877 ORTHO05D004647 4.8e-10 67.4 46 63.0
AUR62012296 Chenopodium quinoa HOM05D003877 ORTHO05D004647 6.3e-10 67.0 61 54.1
AUR62022935 Chenopodium quinoa HOM05D003877 ORTHO05D004647 6.3e-10 67.0 61 54.1
Nn7g35848 Nelumbo nucifera HOM05D003877 ORTHO05D004647 8.3e-10 66.6 59 55.9
SGA_v2.0_scaffold2G01375 Striga asiatica HOM05D003877 ORTHO05D004647 8.3e-10 66.6 64 51.6
GSVIVG01032758001 Vitis vinifera HOM05D003877 ORTHO05D004647 1.8e-09 65.5 65 53.8
Cpa.g.sc19.135 Carica papaya HOM05D003877 ORTHO05D004647 2.4e-09 65.1 44 61.4
Lsat_1_v5_gn_9_123441 Lactuca sativa HOM05D003877 ORTHO05D004647 2.4e-09 65.1 59 52.5
Manes.07G134500 Manihot esculenta HOM05D003877 ORTHO05D004647 2.4e-09 65.1 58 56.9
Ciclev10031326m.g Citrus clementina HOM05D003877 ORTHO05D004647 3.1e-09 64.7 62 53.2
SalBow3G0419 Salvia bowleyana HOM05D003877 ORTHO05D004647 3.1e-09 64.7 41 70.7
SalBow3G1521 Salvia bowleyana HOM05D003877 ORTHO05D004647 3.1e-09 64.7 41 70.7
SGA_v2.0_scaffold85G26692 Striga asiatica HOM05D003877 ORTHO05D004647 3.1e-09 64.7 68 47.1
vmacro17690 Vaccinium macrocarpon HOM05D003877 ORTHO05D004647 3.1e-09 64.7 58 56.9
PGSC0003DMG400030038 Solanum tuberosum HOM05D003877 ORTHO05D004647 4.1e-09 64.3 65 52.3
THA.LOC104810121 Tarenaya hassleriana HOM05D003877 ORTHO05D004647 4.1e-09 64.3 57 56.1
Glyma.05G080100 Glycine max HOM05D003877 ORTHO05D004647 7.0e-09 63.5 60 51.7
Lalb_Chr08g0231521 Lupinus albus HOM05D003877 ORTHO05D004647 7.0e-09 63.5 45 62.2
ATR0681G014 Amborella trichopoda HOM05D003877 ORTHO05D004647 9.1e-09 63.2 60 50.0
ECA233G0637 Erigeron canadensis HOM05D003877 ORTHO05D004647 9.1e-09 63.2 67 46.3
SGA_v2.0_scaffold60G20966 Striga asiatica HOM05D003877 ORTHO05D004647 9.1e-09 63.2 68 45.6
BcaC05g24837 Brassica carinata HOM05D003877 ORTHO05D004647 1.2e-08 62.8 57 50.9
Gohir.A05G331800 Gossypium hirsutum HOM05D003877 ORTHO05D004647 1.2e-08 62.8 65 53.8
Sp1g08500 Schrenkiella parvula HOM05D003877 ORTHO05D004647 1.2e-08 62.8 57 54.4
VMungo0540G0037 Vigna mungo HOM05D003877 ORTHO05D004647 1.2e-08 62.8 42 64.3
CANSAT56G2949 Cannabis sativa HOM05D003877 ORTHO05D004647 1.6e-08 62.4 61 47.5
Solyc06g050990.3 Solanum lycopersicum HOM05D003877 ORTHO05D004647 1.6e-08 62.4 60 55.0
Sopen06g016790 Solanum pennellii HOM05D003877 ORTHO05D004647 1.6e-08 62.4 60 55.0
SGA_v2.0_scaffold85G26702 Striga asiatica HOM05D003877 ORTHO05D004647 1.6e-08 62.4 60 48.3
Gohir.D04G070400 Gossypium hirsutum HOM05D003877 ORTHO05D004647 2.7e-08 61.6 65 53.8
Lalb_Chr23g0277091 Lupinus albus HOM05D003877 ORTHO05D004647 2.7e-08 61.6 62 50.0
Manes.10G009000 Manihot esculenta HOM05D003877 ORTHO05D004647 2.7e-08 61.6 59 55.9
MSTRG.8927 Avicennia marina HOM05D003877 ORTHO05D004647 3.5e-08 61.2 63 49.2
PGR142G4288 Punica granatum HOM05D003877 ORTHO05D004647 3.5e-08 61.2 59 49.2
Sc11g0005270 Simmondsia chinensis HOM05D003877 ORTHO05D004647 3.5e-08 61.2 60 50.0
Thhalv10007485m.g Eutrema salsugineum HOM05D003877 ORTHO05D004647 4.5e-08 60.8 57 52.6
C05p07990 Brassica napus HOM05D003877 ORTHO05D004647 5.9e-08 60.5 57 49.1
BolC5t29551H Brassica oleracea HOM05D003877 ORTHO05D004647 5.9e-08 60.5 57 49.1
CiPaw.02G195400 Carya illinoinensis HOM05D003877 ORTHO05D004647 5.9e-08 60.5 60 56.7
THA.LOC104824338 Tarenaya hassleriana HOM05D003877 ORTHO05D004647 5.9e-08 60.5 57 52.6
Aa31LG1G5020 Aethionema arabicum HOM05D003877 ORTHO05D004647 7.7e-08 60.1 44 59.1
AL1G20470 Arabidopsis lyrata HOM05D003877 ORTHO05D004647 1.0e-07 59.7 57 52.6
Carub.0001s0925 Capsella rubella HOM05D003877 ORTHO05D004647 1.0e-07 59.7 57 52.6
vmacro17691 Vaccinium macrocarpon HOM05D003877 ORTHO05D004647 1.0e-07 59.7 67 49.3
GSVIVG01032757001 Vitis vinifera HOM05D003877 ORTHO05D004647 1.0e-07 59.7 65 50.8
arahy.Tifrunner.gnm1.ann1.EHZF9M Arachis hypogaea HOM05D003877 ORTHO05D004647 1.3e-07 59.3 62 46.8
arahy.Tifrunner.gnm1.ann1.ZCM4RK Arachis hypogaea HOM05D003877 ORTHO05D004647 1.3e-07 59.3 62 46.8
RcHm_v2.0_Chr1g0370931 Rosa chinensis HOM05D003877 ORTHO05D004647 1.3e-07 59.3 70 50.0
Peaxi162Scf00284g00528 Petunia axillaris HOM05D003877 ORTHO05D004647 1.7e-07 58.9 60 46.7
AT1G09870 Arabidopsis thaliana HOM05D003877 ORTHO05D004647 2.9e-07 58.2 57 50.9
CARHR009900 Cardamine hirsuta HOM05D003877 ORTHO05D004647 2.9e-07 58.2 65 49.2
ATR0068G102 Amborella trichopoda HOM05D003877 ORTHO05D004647 5.0e-07 57.4 60 46.7
arahy.Tifrunner.gnm1.ann1.EJG72V Arachis hypogaea HOM05D003877 ORTHO05D004647 6.6e-07 57.0 62 45.2
A06p06580 Brassica napus HOM05D003877 ORTHO05D004647 8.6e-07 56.6 59 47.5
BraA06t23872Z Brassica rapa HOM05D003877 ORTHO05D004647 8.6e-07 56.6 59 47.5
Gorai.012G079000 Gossypium raimondii HOM05D003877 ORTHO05D004647 1.9e-06 55.5 65 49.2
BcaC07g41857 Brassica carinata HOM05D003877 ORTHO05D004647 2.5e-06 55.1 57 47.4
A09p65300 Brassica napus HOM05D003877 ORTHO05D004647 2.5e-06 55.1 56 48.2
C08p49240 Brassica napus HOM05D003877 ORTHO05D004647 2.5e-06 55.1 57 47.4
BolC8t52459H Brassica oleracea HOM05D003877 ORTHO05D004647 2.5e-06 55.1 57 47.4
Cc02_g06060 Coffea canephora HOM05D003877 ORTHO05D004647 3.3e-06 54.7 75 42.7
Peaxi162Scf01149g00319 Petunia axillaris HOM05D003877 ORTHO05D004647 4.2e-06 54.3 28 82.1
PSO801G0566 Papaver somniferum HOM05D003877 ORTHO05D004647 7.2e-06 53.5 60 48.3


User provided reference genes

Program Settings