Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 1.4e-82 309.7 172 100.0
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 1.1e-79 300.1 170 97.1
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 2.1e-54 216.1 174 71.3
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 6.4e-51 204.5 176 72.7
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 1.8e-48 196.4 177 68.4
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 3.0e-48 195.7 174 67.8
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 4.3e-47 191.8 177 69.5
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 8.1e-46 187.6 172 68.6
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 3.1e-45 185.7 177 63.3
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 3.1e-45 185.7 176 67.0
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 4.5e-44 181.8 174 66.1
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 7.6e-44 181.0 177 64.4
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 3.8e-43 178.7 173 64.2
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 4.2e-42 175.3 169 63.9
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 2.1e-41 172.9 174 62.6
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 3.5e-41 172.2 167 65.9
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 4.6e-41 171.8 177 63.8
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 6.0e-41 171.4 177 61.6
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 2.3e-40 169.5 171 62.0
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 3.0e-40 169.1 177 62.1
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 3.3e-39 165.6 177 55.4
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 5.6e-39 164.9 162 64.8
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 2.1e-38 162.9 175 61.7
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 2.1e-38 162.9 172 62.8
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 4.8e-38 161.8 177 58.8
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 8.2e-38 161.0 177 58.8
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 1.2e-36 157.1 167 61.1
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 2.0e-36 156.4 175 58.9
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 1.0e-35 154.1 173 57.2
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 3.8e-35 152.1 175 57.1
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 3.8e-35 152.1 179 58.7
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 7.1e-34 147.9 176 58.5
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 2.7e-33 146.0 168 57.7
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 3.5e-33 145.6 177 57.6
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 3.5e-33 145.6 169 57.4
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 7.9e-33 144.4 174 54.0
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 1.3e-32 143.7 178 56.7
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 1.8e-32 143.3 172 54.1
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 2.3e-32 142.9 172 51.2
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 2.3e-32 142.9 167 58.1
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 3.9e-32 142.1 155 61.3
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 3.9e-32 142.1 168 56.0
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 5.1e-32 141.7 172 55.8
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 8.7e-32 141.0 176 55.1
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 1.1e-31 140.6 157 58.0
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 1.9e-31 139.8 173 56.1
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 2.5e-31 139.4 173 56.1
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 2.5e-31 139.4 177 57.6
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 2.5e-31 139.4 163 54.0
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 3.3e-31 139.0 170 55.3
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 3.3e-31 139.0 171 55.6
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 4.3e-31 138.7 171 55.6
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 4.3e-31 138.7 170 55.3
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 4.3e-31 138.7 175 56.6
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 5.7e-31 138.3 173 54.3
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 9.7e-31 137.5 144 63.9
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 9.7e-31 137.5 173 54.9
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.3e-30 137.1 169 58.6
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 1.6e-30 136.7 171 48.5
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 2.2e-30 136.3 175 56.6
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.2e-30 136.3 175 56.6
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.2e-30 136.3 175 56.6
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 2.8e-30 136.0 156 55.8
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 2.8e-30 136.0 173 54.9
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 3.7e-30 135.6 145 64.1
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 3.7e-30 135.6 172 55.8
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 8.2e-30 134.4 117 72.6
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 8.2e-30 134.4 145 63.4
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 1.1e-29 134.0 173 56.1
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 1.1e-29 134.0 129 67.4
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 1.4e-29 133.7 166 53.6
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 1.4e-29 133.7 156 57.1
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 2.4e-29 132.9 171 54.4
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 5.3e-29 131.7 173 53.8
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 1.2e-28 130.6 172 54.7
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 1.2e-28 130.6 174 54.0
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 2.0e-28 129.8 133 65.4
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 2.0e-28 129.8 151 58.9
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 3.4e-28 129.0 169 55.6
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 5.9e-28 128.3 171 53.8
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 1.0e-27 127.5 169 52.7
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 1.3e-27 127.1 174 55.2
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 2.2e-27 126.3 170 52.4
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 6.5e-27 124.8 157 59.2
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 1.1e-26 124.0 116 73.3
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 1.4e-26 123.6 164 54.3
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 1.2e-25 120.6 159 54.1
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 5.1e-24 115.2 174 49.4
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 1.9e-23 113.2 152 59.2
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 1.3e-22 110.5 98 75.5
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 1.1e-21 107.5 172 50.0
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 9.1e-21 104.4 168 47.0
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 3.4e-20 102.4 148 52.7
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 4.5e-20 102.1 166 48.8
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 1.7e-19 100.1 78 79.5
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 5.0e-19 98.6 122 48.4
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 4.2e-18 95.5 127 55.1
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 3.6e-17 92.4 168 44.0
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 2.0e-15 86.7 125 51.2
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 9.7e-15 84.3 99 60.6
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 2.2e-14 83.2 94 57.4
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 3.7e-14 82.4 82 69.5
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 5.9e-12 75.1 83 62.7
AUR62044264 Chenopodium quinoa HOM05D007523 ORTHO05D009520 2.1e-09 66.6 132 53.0
CDE02G3979 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 2.0e-07 60.1 116 34.5


User provided reference genes

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