Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003150 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 2.9e-102 375.2 182 100.0
CSS0047075 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 1.4e-99 366.3 182 98.4
CSS0015023 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 3.4e-42 175.6 157 61.8
CSS0042292 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 2.2e-41 172.9 157 61.1
vmacro00998 Vaccinium macrocarpon HOM05D005394 ORTHO05D006909 2.4e-40 169.5 154 58.4
Dinv07076 Davidia involucrata HOM05D005394 ORTHO05D006909 9.2e-40 167.5 155 58.1
Nn8g41245 Nelumbo nucifera HOM05D005394 ORTHO05D006909 2.1e-39 166.4 158 59.5
Thecc.04G175300 Theobroma cacao HOM05D005394 ORTHO05D006909 4.6e-39 165.2 158 58.9
Ciclev10030699m.g Citrus clementina HOM05D005394 ORTHO05D006909 1.7e-38 163.3 158 58.2
TAR626G0164 Trochodendron aralioides HOM05D005394 ORTHO05D006909 3.0e-38 162.5 156 57.1
GSVIVG01020852001 Vitis vinifera HOM05D005394 ORTHO05D006909 3.0e-38 162.5 156 56.4
CiPaw.03G191600 Carya illinoinensis HOM05D005394 ORTHO05D006909 3.9e-38 162.2 155 56.8
Ca_06271_v3 Cicer arietinum L. HOM05D005394 ORTHO05D006909 5.1e-38 161.8 151 57.6
RcHm_v2.0_Chr2g0151781 Rosa chinensis HOM05D005394 ORTHO05D006909 5.1e-38 161.8 156 57.1
Actinidia12539 Actinidia chinensis HOM05D005394 ORTHO05D006909 6.6e-38 161.4 156 56.4
Duzib212G0967 Durio zibethinus HOM05D005394 ORTHO05D006909 6.6e-38 161.4 158 58.2
MD17G1137000 Malus domestica HOM05D005394 ORTHO05D006909 6.6e-38 161.4 158 55.7
PSO675G3098 Papaver somniferum HOM05D005394 ORTHO05D006909 6.6e-38 161.4 149 57.0
MBI16_g26174_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 8.6e-38 161.0 178 50.6
MD09G1149900 Malus domestica HOM05D005394 ORTHO05D006909 8.6e-38 161.0 158 55.1
FvH4_6g38530 Fragaria vesca HOM05D005394 ORTHO05D006909 1.1e-37 160.6 149 57.7
FAN02G2503 Fragaria x ananassa HOM05D005394 ORTHO05D006909 1.1e-37 160.6 149 57.7
FAN05G5751 Fragaria x ananassa HOM05D005394 ORTHO05D006909 1.1e-37 160.6 149 57.7
FAN14G2062 Fragaria x ananassa HOM05D005394 ORTHO05D006909 1.1e-37 160.6 149 57.7
Gohir.D10G126100 Gossypium hirsutum HOM05D005394 ORTHO05D006909 1.1e-37 160.6 157 56.1
Gorai.011G139100 Gossypium raimondii HOM05D005394 ORTHO05D006909 1.1e-37 160.6 157 56.1
Medtr5g091250 Medicago truncatula HOM05D005394 ORTHO05D006909 1.9e-37 159.8 151 57.0
EL10Ac9g22847 Beta vulgaris HOM05D005394 ORTHO05D006909 2.5e-37 159.5 151 57.0
Lalb_Chr17g0348211 Lupinus albus HOM05D005394 ORTHO05D006909 2.5e-37 159.5 150 57.3
Ah.01g001930 Amaranthus hybridus HOM05D005394 ORTHO05D006909 3.3e-37 159.1 151 56.3
Haze_13523 Corylus avellana HOM05D005394 ORTHO05D006909 3.3e-37 159.1 156 57.1
Prupe.3G175300 Prunus persica HOM05D005394 ORTHO05D006909 4.3e-37 158.7 149 56.4
LjContig00049g0014840 Lotus japonicus HOM05D005394 ORTHO05D006909 5.6e-37 158.3 150 57.3
Eucgr.A02013 Eucalyptus grandis HOM05D005394 ORTHO05D006909 7.3e-37 157.9 149 57.0
PSO541G2917 Papaver somniferum HOM05D005394 ORTHO05D006909 7.3e-37 157.9 149 56.4
MSTRG.15035 Avicennia marina HOM05D005394 ORTHO05D006909 9.5e-37 157.5 147 57.8
FAN09G4660 Fragaria x ananassa HOM05D005394 ORTHO05D006909 9.5e-37 157.5 149 57.0
Manes.02G088100 Manihot esculenta HOM05D005394 ORTHO05D006909 9.5e-37 157.5 156 56.4
Aqoxy1G01759 Aquilegia oxysepala HOM05D005394 ORTHO05D006909 1.2e-36 157.1 149 56.4
Psat0s1569g0040 Pisum sativum HOM05D005394 ORTHO05D006909 1.2e-36 157.1 151 56.3
SGA_v2.0_scaffold4G02121 Striga asiatica HOM05D005394 ORTHO05D006909 1.2e-36 157.1 149 55.7
AUR62015139 Chenopodium quinoa HOM05D005394 ORTHO05D006909 1.6e-36 156.8 157 53.5
Gohir.A10G140600 Gossypium hirsutum HOM05D005394 ORTHO05D006909 1.6e-36 156.8 156 57.1
Lj1A601G23 Lonicera japonica HOM05D005394 ORTHO05D006909 1.6e-36 156.8 151 56.3
MBI10_g36389_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 1.6e-36 156.8 149 57.0
COL.COLO4_10088 Corchorus olitorius HOM05D005394 ORTHO05D006909 2.1e-36 156.4 156 54.5
Glyma.02G286300 Glycine max HOM05D005394 ORTHO05D006909 2.1e-36 156.4 158 56.3
Glyma.14G029500 Glycine max HOM05D005394 ORTHO05D006909 2.1e-36 156.4 158 56.3
HanXRQChr16g0503181 Helianthus annuus HOM05D005394 ORTHO05D006909 2.1e-36 156.4 157 54.1
CAN.G2018.3 Capsicum annuum HOM05D005394 ORTHO05D006909 2.8e-36 156.0 147 56.5
CANSAT64G3008 Cannabis sativa HOM05D005394 ORTHO05D006909 3.6e-36 155.6 178 47.2
CDE02G3161 Ceratophyllum demersum HOM05D005394 ORTHO05D006909 3.6e-36 155.6 153 53.6
HanXRQChr17g0559821 Helianthus annuus HOM05D005394 ORTHO05D006909 3.6e-36 155.6 157 54.1
Manes.01G130300 Manihot esculenta HOM05D005394 ORTHO05D006909 3.6e-36 155.6 157 55.4
PGSC0003DMG400021243 Solanum tuberosum HOM05D005394 ORTHO05D006909 3.6e-36 155.6 147 55.8
DCAR_009812 Daucus carota HOM05D005394 ORTHO05D006909 4.7e-36 155.2 150 55.3
Nitab4.5_0002209g0020 Nicotiana tabacum HOM05D005394 ORTHO05D006909 4.7e-36 155.2 147 56.5
Potri.005G203900 Populus trichocarpa HOM05D005394 ORTHO05D006909 4.7e-36 155.2 156 55.1
VMungo0647G2040 Vigna mungo HOM05D005394 ORTHO05D006909 4.7e-36 155.2 158 55.7
Zm00001eb286850 Zea mays HOM05D005394 ORTHO05D006909 4.7e-36 155.2 149 57.0
HanXRQChr09g0276121 Helianthus annuus HOM05D005394 ORTHO05D006909 6.2e-36 154.8 157 53.5
Peaxi162Scf00035g02520 Petunia axillaris HOM05D005394 ORTHO05D006909 6.2e-36 154.8 150 56.0
Sc06g0007690 Simmondsia chinensis HOM05D005394 ORTHO05D006909 6.2e-36 154.8 149 55.0
Cfa023066 Carpinus fangiana HOM05D005394 ORTHO05D006909 8.1e-36 154.5 156 56.4
AUR62017599 Chenopodium quinoa HOM05D005394 ORTHO05D006909 8.1e-36 154.5 157 52.9
Phvul.008G193314 Phaseolus vulgaris HOM05D005394 ORTHO05D006909 8.1e-36 154.5 158 55.7
Solyc10g007720.4 Solanum lycopersicum HOM05D005394 ORTHO05D006909 8.1e-36 154.5 147 55.1
Sopen10g003630 Solanum pennellii HOM05D005394 ORTHO05D006909 8.1e-36 154.5 147 55.1
Lsat_1_v5_gn_8_142320 Lactuca sativa HOM05D005394 ORTHO05D006909 1.1e-35 154.1 155 52.9
PGR042G0197 Punica granatum HOM05D005394 ORTHO05D006909 1.1e-35 154.1 153 53.6
QL08p044839 Quercus lobata HOM05D005394 ORTHO05D006909 1.1e-35 154.1 147 57.1
Cpa.g.sc2.203 Carica papaya HOM05D005394 ORTHO05D006909 1.4e-35 153.7 149 57.0
ClCG02G018460 Citrullus lanatus HOM05D005394 ORTHO05D006909 1.4e-35 153.7 147 55.8
Sabra02G0047500 Salix brachista HOM05D005394 ORTHO05D006909 1.4e-35 153.7 152 55.9
CsaV3_6G013780 Cucumis sativus L. HOM05D005394 ORTHO05D006909 1.8e-35 153.3 151 54.3
Migut.E01770 Erythranthe guttata HOM05D005394 ORTHO05D006909 1.8e-35 153.3 147 55.8
Nitab4.5_0003104g0050 Nicotiana tabacum HOM05D005394 ORTHO05D006909 2.3e-35 152.9 147 55.1
THA.LOC104825567 Tarenaya hassleriana HOM05D005394 ORTHO05D006909 2.3e-35 152.9 149 53.7
arahy.Tifrunner.gnm1.ann1.C2BK4Q Arachis hypogaea HOM05D005394 ORTHO05D006909 3.1e-35 152.5 150 55.3
Sabra05G0154700 Salix brachista HOM05D005394 ORTHO05D006909 5.2e-35 151.8 155 54.8
ATR0605G001 Amborella trichopoda HOM05D005394 ORTHO05D006909 6.8e-35 151.4 155 51.6
arahy.Tifrunner.gnm1.ann1.3I6JR3 Arachis hypogaea HOM05D005394 ORTHO05D006909 6.8e-35 151.4 150 54.7
Cc05_g09680 Coffea canephora HOM05D005394 ORTHO05D006909 6.8e-35 151.4 147 55.1
Oeu020932.1 Olea europaea HOM05D005394 ORTHO05D006909 8.9e-35 151.0 147 54.4
TWI14G0801 Tripterygium wilfordii HOM05D005394 ORTHO05D006909 1.2e-34 150.6 150 55.3
Potri.002G058300 Populus trichocarpa HOM05D005394 ORTHO05D006909 2.0e-34 149.8 147 55.8
Atru.BG.36.p Acer truncatum HOM05D005394 ORTHO05D006909 4.4e-34 148.7 149 55.0
MELO3C019674.2 Cucumis melo HOM05D005394 ORTHO05D006909 4.4e-34 148.7 144 56.2
Sed0020842 Sechium edule HOM05D005394 ORTHO05D006909 4.4e-34 148.7 146 54.1
Sed0013102 Sechium edule HOM05D005394 ORTHO05D006909 5.8e-34 148.3 151 52.3
Aa31sc829G10 Aethionema arabicum HOM05D005394 ORTHO05D006909 9.9e-34 147.5 157 49.0
Thhalv10018283m.g Eutrema salsugineum HOM05D005394 ORTHO05D006909 8.4e-33 144.4 149 49.7
unitig_46.g18287 Utricularia gibba HOM05D005394 ORTHO05D006909 1.1e-32 144.1 147 50.3
BraA07t31074Z Brassica rapa HOM05D005394 ORTHO05D006909 1.9e-32 143.3 152 50.0
Actinidia25071 Actinidia chinensis HOM05D005394 ORTHO05D006909 2.4e-32 142.9 130 61.5
BcaB03g15148 Brassica carinata HOM05D005394 ORTHO05D006909 2.4e-32 142.9 149 50.3
BcaC08g46016 Brassica carinata HOM05D005394 ORTHO05D006909 2.4e-32 142.9 152 49.3
A07p34470 Brassica napus HOM05D005394 ORTHO05D006909 2.4e-32 142.9 152 49.3
C06p38110 Brassica napus HOM05D005394 ORTHO05D006909 2.4e-32 142.9 152 49.3
BolC6t38908H Brassica oleracea HOM05D005394 ORTHO05D006909 2.4e-32 142.9 152 49.3
CDE09G0652 Ceratophyllum demersum HOM05D005394 ORTHO05D006909 2.4e-32 142.9 153 49.7
SHI02103 Sapria himalayana HOM05D005394 ORTHO05D006909 2.4e-32 142.9 173 45.1
HPP92_002195 Vanilla planifolia HOM05D005394 ORTHO05D006909 2.4e-32 142.9 149 51.7
CARHR060570 Cardamine hirsuta HOM05D005394 ORTHO05D006909 5.4e-32 141.7 149 49.7
AT1G67930 Arabidopsis thaliana HOM05D005394 ORTHO05D006909 7.1e-32 141.4 152 47.4
Sp5g22930 Schrenkiella parvula HOM05D005394 ORTHO05D006909 1.6e-31 140.2 152 46.7
AL2G26730 Arabidopsis lyrata HOM05D005394 ORTHO05D006909 2.1e-31 139.8 147 49.0
C06p42040 Brassica napus HOM05D005394 ORTHO05D006909 2.7e-31 139.4 149 49.0
Carub.0002s1442 Capsella rubella HOM05D005394 ORTHO05D006909 2.7e-31 139.4 152 46.7
BcaC08g46216 Brassica carinata HOM05D005394 ORTHO05D006909 4.6e-31 138.7 147 49.0
BolC6t39222H Brassica oleracea HOM05D005394 ORTHO05D006909 6.0e-31 138.3 148 50.0
BcaB03g15386 Brassica carinata HOM05D005394 ORTHO05D006909 1.7e-30 136.7 149 47.7
Mapoly0082s0010 Marchantia polymorpha HOM05D005394 ORTHO05D006909 1.7e-30 136.7 147 49.7
Oeu033979.1 Olea europaea HOM05D005394 ORTHO05D006909 7.3e-29 131.3 112 61.6
SEGI_12117 Sequoiadendron giganteum HOM05D005394 ORTHO05D006909 1.6e-28 130.2 155 45.2
CBR_g53704 Chara braunii HOM05D005394 ORTHO05D006909 6.2e-28 128.3 154 45.5
Pp3c14_13420 Physcomitrium patens HOM05D005394 ORTHO05D006909 1.4e-27 127.1 151 43.7
SMO266G0070 Selaginella moellendorffii HOM05D005394 ORTHO05D006909 1.8e-27 126.7 147 45.6
Pp3c10_16550 Physcomitrium patens HOM05D005394 ORTHO05D006909 5.2e-27 125.2 151 43.0
ECA233G4606 Erigeron canadensis HOM05D005394 ORTHO05D006909 2.1e-23 113.2 123 50.4
Cre17.g721900 Chlamydomonas reinhardtii HOM05D005394 ORTHO05D006909 2.4e-08 63.2 118 33.9
MCO08G047 Micromonas commoda HOM05D005394 ORTHO05D006909 7.9e-07 58.2 151 25.8


User provided reference genes

Program Settings