Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 3.4e-158 561.6 282 100.0
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 7.1e-132 474.2 351 72.1
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 7.1e-124 447.6 279 81.0
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 1.2e-115 420.2 301 71.8
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 2.1e-115 419.5 279 76.7
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 2.8e-112 409.1 282 74.5
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 1.8e-111 406.4 286 75.2
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 1.2e-110 403.7 283 74.6
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 1.5e-110 403.3 283 74.2
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 1.3e-109 400.2 318 69.2
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 5.0e-109 398.3 284 73.9
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 5.0e-109 398.3 283 73.5
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 6.5e-109 397.9 300 69.3
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 8.5e-109 397.5 282 73.0
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 1.9e-108 396.4 288 74.7
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 3.2e-108 395.6 279 74.6
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 2.1e-107 392.9 281 73.7
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 3.9e-106 388.7 291 74.2
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 6.7e-106 387.9 287 72.1
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 2.6e-105 386.0 283 71.0
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 1.3e-104 383.6 287 71.8
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 8.2e-104 380.9 280 69.6
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 5.3e-103 378.3 284 71.5
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 2.0e-102 376.3 281 68.7
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 2.6e-102 375.9 315 66.0
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 2.6e-102 375.9 285 68.4
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 4.5e-102 375.2 302 68.2
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 7.7e-102 374.4 281 68.7
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 1.0e-101 374.0 279 68.5
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 1.0e-101 374.0 290 68.3
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 1.0e-101 374.0 290 67.9
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 1.3e-101 373.6 283 69.3
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 1.3e-101 373.6 281 67.6
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 6.5e-101 371.3 282 68.1
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 8.5e-101 370.9 285 68.4
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 1.1e-100 370.5 281 68.3
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 1.5e-100 370.2 331 62.8
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 3.2e-100 369.0 279 67.0
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 3.2e-100 369.0 286 68.2
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 5.5e-100 368.2 283 69.3
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 7.2e-100 367.9 286 67.8
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 6.1e-99 364.8 279 67.0
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 6.1e-99 364.8 279 67.0
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 6.1e-99 364.8 286 67.8
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 8.0e-99 364.4 279 67.0
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 8.0e-99 364.4 288 67.7
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 8.0e-99 364.4 265 72.5
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 1.0e-98 364.0 287 67.9
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 4.0e-98 362.1 285 67.0
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 1.1e-97 360.5 277 66.4
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 5.7e-97 358.2 281 65.1
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 7.4e-97 357.8 289 65.7
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 2.2e-96 356.3 284 68.3
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 8.2e-96 354.4 281 66.5
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 1.1e-95 354.0 291 66.3
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 1.1e-95 354.0 283 66.1
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 1.4e-95 353.6 287 65.9
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 2.4e-95 352.8 267 68.2
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 4.1e-95 352.1 287 65.2
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 2.0e-94 349.7 292 65.4
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 2.0e-94 349.7 287 64.8
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 1.3e-93 347.1 282 64.5
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 2.2e-93 346.3 283 63.6
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 1.9e-92 343.2 283 64.3
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 1.9e-92 343.2 285 64.2
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 3.2e-92 342.4 284 64.8
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 3.2e-92 342.4 283 65.0
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 4.2e-92 342.0 290 61.7
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 5.5e-92 341.7 288 67.4
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 2.1e-91 339.7 286 64.7
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 4.7e-91 338.6 276 64.5
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 3.0e-90 335.9 238 70.6
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 8.8e-90 334.3 282 64.2
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 1.2e-89 334.0 259 68.3
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 3.4e-89 332.4 274 65.0
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.3e-88 330.5 282 60.6
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 3.5e-86 322.4 254 68.9
FAN19G2878 Fragaria x ananassa HOM05D006522 ORTHO05D008183 1.1e-84 317.4 329 56.8
CARHR203220 Cardamine hirsuta HOM05D006522 ORTHO05D008183 1.5e-84 317.0 224 68.8
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 1.2e-83 313.9 280 60.0
Oeu028389.1 Olea europaea HOM05D006522 ORTHO05D008183 1.2e-81 307.4 207 72.9
SalBow3G1116 Salvia bowleyana HOM05D006522 ORTHO05D008183 2.0e-81 306.6 261 64.0
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 4.4e-81 305.4 197 79.2
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 1.3e-80 303.9 190 80.5
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 1.8e-79 300.1 192 78.1
A10p27440 Brassica napus HOM05D006522 ORTHO05D008183 2.4e-79 299.7 202 72.8
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 4.5e-78 295.4 258 62.8
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 1.9e-76 290.0 284 58.5
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 5.6e-76 288.5 277 58.8
AT5G10070 Arabidopsis thaliana HOM05D006522 ORTHO05D008183 1.2e-75 287.3 202 71.8
ECA238G2930 Erigeron canadensis HOM05D006522 ORTHO05D008183 1.0e-74 284.3 203 71.4
AUR62013648 Chenopodium quinoa HOM05D006522 ORTHO05D008183 5.4e-71 271.9 276 54.0
unitig_736.g22572 Utricularia gibba HOM05D006522 ORTHO05D008183 2.0e-70 270.0 254 56.3
Pp3c17_17150 Physcomitrium patens HOM05D006522 ORTHO05D008183 1.2e-67 260.8 279 50.2
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 6.2e-67 258.5 300 53.3
Mapoly0168s0016 Marchantia polymorpha HOM05D006522 ORTHO05D008183 6.2e-67 258.5 278 50.0
Psat7g089320 Pisum sativum HOM05D006522 ORTHO05D008183 8.3e-64 248.1 195 64.6
SMO139G0021 Selaginella moellendorffii HOM05D006522 ORTHO05D008183 1.2e-62 244.2 229 52.4
BcaB08g37140 Brassica carinata HOM05D006522 ORTHO05D008183 5.6e-60 235.3 129 84.5
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 1.6e-59 233.8 268 45.9
MCO11G860 Micromonas commoda HOM05D006522 ORTHO05D008183 6.0e-54 215.3 235 44.7
Cre17.g698950 Chlamydomonas reinhardtii HOM05D006522 ORTHO05D008183 2.3e-53 213.4 192 53.6
Haze_26963 Corylus avellana HOM05D006522 ORTHO05D008183 2.3e-50 203.4 229 45.9
PRCOL_00002914 Prasinoderma coloniale HOM05D006522 ORTHO05D008183 1.5e-49 200.7 178 53.9
MD01G1023100 Malus domestica HOM05D006522 ORTHO05D008183 7.6e-49 198.4 138 77.5
CDE10G0337 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 4.6e-46 189.1 188 59.0
Haze_24999 Corylus avellana HOM05D006522 ORTHO05D008183 2.5e-44 183.3 204 53.9
Cfa022135 Carpinus fangiana HOM05D006522 ORTHO05D008183 3.0e-37 159.8 248 36.3
AUR62004200 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.2e-30 137.9 219 41.1
Eucgr.L02916 Eucalyptus grandis HOM05D006522 ORTHO05D008183 2.3e-29 133.7 109 67.0
SEGI_11019 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 5.5e-23 112.5 56 89.3
SHI11626 Sapria himalayana HOM05D006522 ORTHO05D008183 1.5e-20 104.4 59 78.0
MD01G1023200 Malus domestica HOM05D006522 ORTHO05D008183 2.1e-19 100.5 65 72.3
Aqoxy6G00538 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 8.1e-19 98.6 98 57.1
SEGI_36547 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 8.1e-19 98.6 88 56.8
COL.COLO4_11047 Corchorus olitorius HOM05D006522 ORTHO05D008183 1.8e-18 97.4 103 57.3
SHI11627 Sapria himalayana HOM05D006522 ORTHO05D008183 2.6e-17 93.6 97 50.5
Potri.007G087000 Populus trichocarpa HOM05D006522 ORTHO05D008183 4.5e-17 92.8 80 63.8
CDE10G0344 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 6.0e-14 82.4 86 54.7
AagrBONN_evm.TU.Sc2ySwM_368.3361 Anthoceros agrestis HOM05D006522 ORTHO05D008183 3.9e-13 79.7 91 46.2
DCAR_011495 Daucus carota HOM05D006522 ORTHO05D008183 2.0e-09 67.4 55 63.6
DCAR_011494 Daucus carota HOM05D006522 ORTHO05D008183 1.1e-07 61.6 64 64.1


User provided reference genes

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