Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 8.7e-251 869.8 420 100.0
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.1e-220 768.8 404 93.6
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.0e-214 750.0 400 91.5
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 6.0e-167 591.3 416 72.6
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.8e-163 579.7 366 81.1
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 1.1e-160 570.5 430 68.6
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 2.1e-151 539.7 388 70.1
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 5.1e-150 535.0 409 65.8
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 7.3e-149 531.2 416 65.9
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 9.6e-149 530.8 416 63.9
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 4.0e-147 525.4 416 64.4
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 9.9e-146 520.8 416 63.5
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 7.1e-144 514.6 428 61.0
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 9.3e-144 514.2 416 63.7
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 2.7e-143 512.7 416 63.5
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 1.0e-142 510.8 416 61.5
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 5.1e-142 508.4 415 62.7
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 8.7e-142 507.7 414 62.1
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 1.9e-141 506.5 416 61.8
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 3.3e-141 505.8 414 62.1
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 3.3e-141 505.8 414 62.8
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 4.3e-141 505.4 416 61.8
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 4.3e-141 505.4 415 62.7
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 4.3e-141 505.4 414 60.6
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 5.6e-141 505.0 414 63.0
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 3.1e-139 499.2 414 62.1
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 3.1e-139 499.2 416 61.1
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 7.6e-138 494.6 385 65.2
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 8.4e-137 491.1 391 62.9
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 1.2e-135 487.3 416 59.4
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 6.0e-135 485.0 415 59.0
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 3.9e-134 482.3 433 57.3
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 3.9e-134 482.3 391 62.4
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 6.7e-134 481.5 442 56.3
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 8.7e-134 481.1 439 56.7
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 1.5e-133 480.3 415 59.3
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 3.3e-133 479.2 402 60.7
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 4.3e-133 478.8 415 58.6
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 9.6e-133 477.6 418 60.3
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 3.7e-132 475.7 414 58.7
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 4.8e-132 475.3 438 55.7
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 2.4e-131 473.0 462 53.9
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 3.1e-131 472.6 391 61.4
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 2.0e-130 469.9 452 53.5
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 9.9e-130 467.6 441 55.1
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 1.3e-129 467.2 417 55.9
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 2.2e-129 466.5 414 58.5
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 4.9e-129 465.3 393 60.8
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 4.9e-129 465.3 401 59.9
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 1.1e-128 464.2 417 56.6
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 1.1e-128 464.2 417 56.6
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 1.1e-128 464.2 441 54.9
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 1.4e-128 463.8 435 57.0
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 2.4e-128 463.0 417 56.4
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 3.2e-128 462.6 417 56.4
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 5.5e-128 461.8 414 57.2
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 7.9e-127 458.0 407 58.2
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 1.3e-126 457.2 380 60.5
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 1.8e-126 456.8 413 57.9
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 1.8e-126 456.8 403 57.8
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 8.7e-126 454.5 417 55.9
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 3.3e-125 452.6 391 60.4
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 5.6e-125 451.8 405 57.0
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 7.4e-125 451.4 444 53.4
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 1.3e-124 450.7 335 68.1
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 2.8e-124 449.5 395 58.0
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 3.7e-124 449.1 366 60.9
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 4.8e-124 448.7 359 63.5
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 1.8e-123 446.8 428 54.9
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 3.1e-123 446.0 412 57.3
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 5.8e-122 441.8 424 54.2
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 3.8e-121 439.1 356 64.3
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 1.9e-120 436.8 405 54.3
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 3.5e-119 432.6 417 53.5
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 1.0e-118 431.0 405 53.6
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 5.1e-118 428.7 425 52.7
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 5.1e-118 428.7 407 53.8
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 3.7e-116 422.5 388 54.9
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 8.2e-116 421.4 409 55.3
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 2.4e-115 419.9 338 62.4
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 3.8e-113 412.5 415 51.6
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 1.6e-111 407.1 344 59.0
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 2.7e-111 406.4 393 56.0
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 2.2e-108 396.7 339 61.1
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 1.0e-105 387.9 381 53.3
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 2.1e-103 380.2 338 57.4
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 3.6e-103 379.4 338 56.2
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 5.3e-99 365.5 387 48.8
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 1.0e-97 361.3 303 58.1
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 3.8e-97 359.4 464 43.5
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 3.2e-96 356.3 394 48.2
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 3.8e-89 332.8 401 44.4
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 9.7e-85 318.2 217 70.0
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 5.9e-82 308.9 399 44.1
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 2.4e-75 287.0 206 68.0
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.2e-66 258.1 130 95.4
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.2e-66 258.1 130 95.4
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 2.4e-59 233.8 198 61.6
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 2.3e-57 227.3 217 54.8
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 2.2e-52 210.7 161 65.8
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 5.8e-45 186.0 151 67.5
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 5.8e-45 186.0 151 67.5
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 2.1e-42 177.6 278 37.1
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 2.8e-39 167.2 150 56.7
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 2.7e-34 150.6 133 57.9
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 2.4e-27 127.5 160 40.6
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 2.7e-26 124.0 160 44.4
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 7.8e-26 122.5 99 64.6
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 7.6e-21 105.9 63 71.4
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 1.5e-13 81.6 61 65.6
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 2.2e-12 77.8 77 53.2
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 2.1e-10 71.2 177 29.4
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 6.0e-10 69.7 75 42.7
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 1.9e-08 64.7 77 40.3
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 2.5e-08 64.3 78 39.7
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 1.6e-07 61.6 76 36.8
Mapoly0022s0145 Marchantia polymorpha HOM05D019562 ORTHO05D021280 1.4e-06 58.5 77 39.0


User provided reference genes

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