Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003087 Camellia sinensis var. sinensis HOM05D005771 ORTHO05D007173 8.5e-191 670.2 353 100.0
Dinv25170 Davidia involucrata HOM05D005771 ORTHO05D007173 3.5e-120 435.6 384 64.1
Actinidia10872 Actinidia chinensis HOM05D005771 ORTHO05D007173 2.8e-117 426.0 386 63.5
Actinidia31481 Actinidia chinensis HOM05D005771 ORTHO05D007173 7.1e-113 411.4 340 66.2
Hma1.2p1_0414F.1_g147560 Hydrangea macrophylla HOM05D005771 ORTHO05D007173 1.5e-107 393.7 381 62.2
Rhsim07G0120600 Rhododendron simsii HOM05D005771 ORTHO05D007173 1.0e-95 354.4 451 51.9
MD06G1043400 Malus domestica HOM05D005771 ORTHO05D007173 2.8e-93 346.3 382 53.1
Solyc08g077450.4 Solanum lycopersicum HOM05D005771 ORTHO05D007173 6.3e-93 345.1 376 54.5
Sopen08g026040 Solanum pennellii HOM05D005771 ORTHO05D007173 8.2e-93 344.7 377 54.4
Potri.001G148500 Populus trichocarpa HOM05D005771 ORTHO05D007173 1.2e-91 340.9 385 53.8
Oeu006260.1 Olea europaea HOM05D005771 ORTHO05D007173 2.0e-91 340.1 373 55.8
TAR629G1255 Trochodendron aralioides HOM05D005771 ORTHO05D007173 2.0e-91 340.1 400 51.5
Prupe.5G050200 Prunus persica HOM05D005771 ORTHO05D007173 2.6e-91 339.7 388 52.6
Nn6g33714 Nelumbo nucifera HOM05D005771 ORTHO05D007173 1.0e-90 337.8 349 53.3
Atru.chr9.1139 Acer truncatum HOM05D005771 ORTHO05D007173 3.8e-90 335.9 382 51.0
Potri.003G085901 Populus trichocarpa HOM05D005771 ORTHO05D007173 3.8e-90 335.9 383 52.2
RcHm_v2.0_Chr7g0207891 Rosa chinensis HOM05D005771 ORTHO05D007173 8.5e-90 334.7 381 50.7
Nitab4.5_0001444g0090 Nicotiana tabacum HOM05D005771 ORTHO05D007173 1.1e-89 334.3 377 53.8
MSTRG.1962 Avicennia marina HOM05D005771 ORTHO05D007173 4.2e-89 332.4 344 56.4
Nitab4.5_0001708g0070 Nicotiana tabacum HOM05D005771 ORTHO05D007173 4.2e-89 332.4 375 52.8
CANSAT21G2176 Cannabis sativa HOM05D005771 ORTHO05D007173 5.5e-89 332.0 354 52.5
Cc08_g01580 Coffea canephora HOM05D005771 ORTHO05D007173 1.2e-88 330.9 382 52.4
Manes.15G171600 Manihot esculenta HOM05D005771 ORTHO05D007173 1.2e-88 330.9 391 51.4
Eucgr.D02148 Eucalyptus grandis HOM05D005771 ORTHO05D007173 1.3e-87 327.4 368 50.8
MD16G1267400 Malus domestica HOM05D005771 ORTHO05D007173 1.8e-87 327.0 383 51.4
Cfa012362 Carpinus fangiana HOM05D005771 ORTHO05D007173 8.7e-87 324.7 382 50.3
ClCG10G001970 Citrullus lanatus HOM05D005771 ORTHO05D007173 2.2e-85 320.1 391 49.9
TWI81G0410 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 3.7e-85 319.3 347 52.4
FvH4_5g20870 Fragaria vesca HOM05D005771 ORTHO05D007173 1.1e-84 317.8 382 48.4
Migut.E00856 Erythranthe guttata HOM05D005771 ORTHO05D007173 2.4e-84 316.6 381 51.4
CiPaw.11G085900 Carya illinoinensis HOM05D005771 ORTHO05D007173 6.9e-84 315.1 382 50.5
Ciclev10020716m.g Citrus clementina HOM05D005771 ORTHO05D007173 6.9e-84 315.1 385 49.6
Migut.E00807 Erythranthe guttata HOM05D005771 ORTHO05D007173 6.9e-84 315.1 381 51.2
Gorai.009G296800 Gossypium raimondii HOM05D005771 ORTHO05D007173 1.0e-82 311.2 341 51.0
FAN18G3681 Fragaria x ananassa HOM05D005771 ORTHO05D007173 8.5e-82 308.1 392 46.9
Gohir.D05G283033 Gossypium hirsutum HOM05D005771 ORTHO05D007173 1.1e-81 307.8 341 50.4
FAN04G1778 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.4e-81 307.4 392 47.2
QL12p007731 Quercus lobata HOM05D005771 ORTHO05D007173 7.2e-81 305.1 381 48.0
Duzib106G1532 Durio zibethinus HOM05D005771 ORTHO05D007173 1.0e-79 301.2 350 49.1
PGR031G0896 Punica granatum HOM05D005771 ORTHO05D007173 1.0e-79 301.2 380 48.9
FAN08G3334 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.8e-79 300.4 397 46.3
Sed0018056 Sechium edule HOM05D005771 ORTHO05D007173 1.8e-79 300.4 402 48.3
Haze_08321 Corylus avellana HOM05D005771 ORTHO05D007173 2.3e-79 300.1 440 44.5
Gohir.A05G281200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 3.9e-79 299.3 341 49.9
TWI60G1113 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 3.9e-79 299.3 380 47.1
SGA_v2.0_scaffold20G09242 Striga asiatica HOM05D005771 ORTHO05D007173 5.1e-79 298.9 367 49.6
DCAR_000726 Daucus carota HOM05D005771 ORTHO05D007173 8.8e-79 298.1 389 46.5
Thecc.10G165100 Theobroma cacao HOM05D005771 ORTHO05D007173 1.1e-78 297.7 343 50.1
CsaV3_3G002100 Cucumis sativus L. HOM05D005771 ORTHO05D007173 2.6e-78 296.6 399 47.6
Lj4g0020972 Lotus japonicus HOM05D005771 ORTHO05D007173 1.3e-77 294.3 340 50.6
Hund11296 Selenicereus undatus HOM05D005771 ORTHO05D007173 2.8e-77 293.1 392 46.2
Phvul.003G227100 Phaseolus vulgaris HOM05D005771 ORTHO05D007173 6.3e-77 292.0 343 50.4
Gohir.A10G183200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 2.6e-75 286.6 341 49.0
Ca_22032_v3 Cicer arietinum L. HOM05D005771 ORTHO05D007173 3.4e-75 286.2 338 48.5
Lalb_Chr05g0220751 Lupinus albus HOM05D005771 ORTHO05D007173 7.7e-75 285.0 378 47.4
Glyma.17G150800 Glycine max HOM05D005771 ORTHO05D007173 1.0e-74 284.6 357 48.7
MELO3C013882.2 Cucumis melo HOM05D005771 ORTHO05D007173 1.3e-74 284.3 424 45.5
Gorai.011G213100 Gossypium raimondii HOM05D005771 ORTHO05D007173 1.3e-74 284.3 341 47.8
Lalb_Chr16g0386311 Lupinus albus HOM05D005771 ORTHO05D007173 1.7e-74 283.9 379 46.4
vmacro14112 Vaccinium macrocarpon HOM05D005771 ORTHO05D007173 1.7e-74 283.9 273 59.3
Lj2g0023107 Lotus japonicus HOM05D005771 ORTHO05D007173 1.9e-73 280.4 345 49.6
COL.COLO4_05118 Corchorus olitorius HOM05D005771 ORTHO05D007173 3.2e-73 279.6 341 48.4
Glyma.05G068200 Glycine max HOM05D005771 ORTHO05D007173 3.2e-73 279.6 376 47.9
Sc01g0007800 Simmondsia chinensis HOM05D005771 ORTHO05D007173 4.2e-73 279.3 382 48.4
Aqoxy3G02583 Aquilegia oxysepala HOM05D005771 ORTHO05D007173 1.2e-72 277.7 348 49.4
arahy.Tifrunner.gnm1.ann1.2CCA8K Arachis hypogaea HOM05D005771 ORTHO05D007173 2.1e-72 276.9 373 46.4
arahy.Tifrunner.gnm1.ann1.X1SA4Y Arachis hypogaea HOM05D005771 ORTHO05D007173 2.1e-72 276.9 373 46.4
Gohir.D10G190000 Gossypium hirsutum HOM05D005771 ORTHO05D007173 4.7e-72 275.8 342 47.4
HanXRQChr12g0368601 Helianthus annuus HOM05D005771 ORTHO05D007173 1.8e-71 273.9 367 47.4
CiPaw.12G058800 Carya illinoinensis HOM05D005771 ORTHO05D007173 3.0e-71 273.1 383 45.7
Peaxi162Scf00084g00314 Petunia axillaris HOM05D005771 ORTHO05D007173 1.5e-70 270.8 371 45.3
DCAR_000728 Daucus carota HOM05D005771 ORTHO05D007173 4.4e-70 269.2 330 47.9
Medtr4g099070 Medicago truncatula HOM05D005771 ORTHO05D007173 1.7e-69 267.3 371 45.0
Sabra03G0055800 Salix brachista HOM05D005771 ORTHO05D007173 2.8e-69 266.5 424 45.5
Lsat_1_v5_gn_6_67960 Lactuca sativa HOM05D005771 ORTHO05D007173 1.1e-68 264.6 355 46.5
TPR.G11182 Trifolium pratense HOM05D005771 ORTHO05D007173 1.1e-68 264.6 411 42.6
GSVIVG01013265001 Vitis vinifera HOM05D005771 ORTHO05D007173 5.9e-67 258.8 166 78.3
Cpa.g.sc2.371 Carica papaya HOM05D005771 ORTHO05D007173 6.5e-66 255.4 301 49.5
CDE02G0742 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 1.5e-62 244.2 343 42.3
ECA233G5206 Erigeron canadensis HOM05D005771 ORTHO05D007173 2.0e-62 243.8 387 42.9
CDE11G1022 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 1.4e-60 237.7 353 42.5
PSO782G3090 Papaver somniferum HOM05D005771 ORTHO05D007173 5.3e-60 235.7 366 42.6
PSO063G1478 Papaver somniferum HOM05D005771 ORTHO05D007173 1.6e-59 234.2 365 41.9
EL10Ac5g12212 Beta vulgaris HOM05D005771 ORTHO05D007173 1.3e-58 231.1 339 43.1
VMungo0251G2395 Vigna mungo HOM05D005771 ORTHO05D007173 3.8e-58 229.6 297 48.8
Sabra01G0116900 Salix brachista HOM05D005771 ORTHO05D007173 5.0e-58 229.2 304 47.7
Thhalv10008194m.g Eutrema salsugineum HOM05D005771 ORTHO05D007173 3.2e-57 226.5 305 45.2
AT1G32730 Arabidopsis thaliana HOM05D005771 ORTHO05D007173 4.2e-57 226.1 345 41.2
Carub.0001s3106 Capsella rubella HOM05D005771 ORTHO05D007173 7.2e-57 225.3 345 42.6
CARHR032110 Cardamine hirsuta HOM05D005771 ORTHO05D007173 2.1e-56 223.8 306 45.1
Aa31LG2G13250 Aethionema arabicum HOM05D005771 ORTHO05D007173 2.7e-56 223.4 378 41.0
AL1G47010 Arabidopsis lyrata HOM05D005771 ORTHO05D007173 4.4e-54 216.1 342 40.4
THA.LOC104812740 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 7.5e-54 215.3 369 39.3
unitig_21.g20376 Utricularia gibba HOM05D005771 ORTHO05D007173 3.7e-53 213.0 372 43.0
HPP92_007338 Vanilla planifolia HOM05D005771 ORTHO05D007173 2.7e-51 206.8 307 46.9
ATR0829G207 Amborella trichopoda HOM05D005771 ORTHO05D007173 3.5e-51 206.5 344 40.1
THA.LOC104807943 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 6.5e-50 202.2 372 37.6
C05p32200 Brassica napus HOM05D005771 ORTHO05D007173 5.5e-49 199.1 384 38.3
BolC5t31952H Brassica oleracea HOM05D005771 ORTHO05D007173 5.5e-49 199.1 384 38.3
Sp1g28240 Schrenkiella parvula HOM05D005771 ORTHO05D007173 1.6e-48 197.6 374 37.7
Psat4g077240 Pisum sativum HOM05D005771 ORTHO05D007173 2.8e-48 196.8 263 46.0
Oeu039354.1 Olea europaea HOM05D005771 ORTHO05D007173 1.0e-47 194.9 254 47.2
Sabra01G0118400 Salix brachista HOM05D005771 ORTHO05D007173 4.0e-47 193.0 303 42.2
AUR62007206 Chenopodium quinoa HOM05D005771 ORTHO05D007173 1.3e-45 188.0 307 41.4
Os08g0129500 Oryza sativa ssp. japonica HOM05D005771 ORTHO05D007173 3.7e-45 186.4 388 37.1
Zm00001eb261700 Zea mays HOM05D005771 ORTHO05D007173 5.4e-44 182.6 343 35.3
Ah.07g199650 Amaranthus hybridus HOM05D005771 ORTHO05D007173 7.8e-43 178.7 397 34.0
AUR62018795 Chenopodium quinoa HOM05D005771 ORTHO05D007173 7.8e-43 178.7 307 40.1
FAN13G3323 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.9e-41 174.1 382 36.1
BcaC05g27301 Brassica carinata HOM05D005771 ORTHO05D007173 3.3e-41 173.3 396 35.4
BcaC05g27831 Brassica carinata HOM05D005771 ORTHO05D007173 1.6e-40 171.0 313 39.0
C05p38290 Brassica napus HOM05D005771 ORTHO05D007173 1.6e-40 171.0 313 39.0
BolC5t32561H Brassica oleracea HOM05D005771 ORTHO05D007173 1.6e-40 171.0 313 39.0
A05p24640 Brassica napus HOM05D005771 ORTHO05D007173 8.0e-40 168.7 284 39.4
BraA05t21350Z Brassica rapa HOM05D005771 ORTHO05D007173 8.0e-40 168.7 284 39.4
SEGI_22059 Sequoiadendron giganteum HOM05D005771 ORTHO05D000001 1.2e-19 101.7 314 30.3
TPR.G12459 Trifolium pratense HOM05D005771 ORTHO05D007173 4.6e-19 99.8 148 44.6
Psat4g077280 Pisum sativum HOM05D005771 ORTHO05D007173 1.5e-14 84.7 71 57.7
SEGI_34267 Sequoiadendron giganteum HOM05D005771 ORTHO05D007173 2.6e-14 84.0 74 56.8
arahy.Tifrunner.gnm1.ann1.ARXY04 Arachis hypogaea HOM05D005771 ORTHO05D007173 4.9e-13 79.7 87 54.0
Zm00001eb173270 Zea mays HOM05D005771 ORTHO05D007173 1.7e-10 71.2 214 27.1
AagrBONN_evm.TU.Sc2ySwM_117.836 Anthoceros agrestis HOM05D005771 ORTHO05D007173 3.0e-10 70.5 206 27.7
Pp3c2_10410 Physcomitrium patens HOM05D005771 ORTHO05D007173 4.3e-09 66.6 232 27.6
Mapoly0082s0082 Marchantia polymorpha HOM05D005771 ORTHO05D007173 1.2e-08 65.1 348 22.7
TAR636G0006 Trochodendron aralioides HOM05D005771 ORTHO05D007173 2.1e-08 64.3 64 50.0


User provided reference genes

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