Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 2.2e-213 745.3 377 100.0
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 4.8e-168 594.7 354 83.6
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 3.8e-165 585.1 363 79.3
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 8.8e-162 573.9 397 73.6
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 7.5e-161 570.9 356 80.1
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 6.1e-155 551.2 371 73.6
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 2.3e-154 549.3 366 74.9
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 4.0e-154 548.5 369 72.6
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 9.8e-153 543.9 363 74.9
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 1.3e-152 543.5 361 74.2
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 2.9e-152 542.3 363 74.7
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 3.2e-151 538.9 360 72.5
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 5.4e-151 538.1 365 70.7
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 2.0e-150 536.2 366 72.1
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 5.0e-149 531.6 360 73.6
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 3.3e-148 528.9 365 70.7
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 2.8e-147 525.8 361 72.9
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 3.1e-146 522.3 367 70.0
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 2.6e-145 519.2 367 69.8
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 5.8e-145 518.1 361 69.3
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 2.9e-144 515.8 351 70.9
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 6.4e-144 514.6 364 68.4
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 8.3e-144 514.2 364 69.2
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 1.1e-143 513.8 360 70.0
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 5.4e-143 511.5 364 68.7
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 7.0e-143 511.1 351 73.8
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 7.0e-143 511.1 364 68.4
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 1.6e-142 510.0 358 69.0
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 3.5e-142 508.8 357 71.7
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 4.6e-142 508.4 364 70.1
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 4.6e-142 508.4 364 70.1
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 4.6e-142 508.4 364 70.1
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 7.8e-142 507.7 364 67.6
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 1.3e-141 506.9 361 67.6
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 1.3e-141 506.9 358 69.0
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 3.9e-141 505.4 351 70.9
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 3.9e-141 505.4 361 69.3
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 6.6e-141 504.6 367 68.7
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 8.6e-141 504.2 368 68.8
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 1.9e-140 503.1 351 70.9
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 2.5e-140 502.7 362 69.9
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 3.3e-140 502.3 351 70.7
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 9.5e-140 500.7 365 67.9
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 1.6e-139 500.0 361 68.1
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 1.6e-139 500.0 357 68.3
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 1.6e-139 500.0 364 66.8
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 3.6e-139 498.8 368 68.2
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 4.7e-139 498.4 362 69.6
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 4.7e-139 498.4 364 66.8
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 6.2e-139 498.0 364 68.4
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 8.1e-139 497.7 371 67.9
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 2.3e-138 496.1 351 69.8
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 3.1e-138 495.7 362 67.1
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 4.0e-138 495.4 354 69.5
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 6.8e-138 494.6 353 69.1
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 7.5e-137 491.1 359 68.2
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 9.8e-137 490.7 394 63.2
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 9.8e-137 490.7 363 65.3
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 1.7e-136 490.0 412 60.4
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 2.9e-136 489.2 361 66.5
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 3.7e-136 488.8 354 66.7
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 6.4e-136 488.0 352 68.2
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 8.3e-136 487.6 325 74.5
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 9.2e-135 484.2 367 66.5
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 2.7e-134 482.6 320 75.0
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 1.3e-133 480.3 325 72.3
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 2.3e-133 479.6 320 75.6
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 3.9e-133 478.8 364 65.1
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 7.3e-132 474.6 363 62.8
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 8.9e-130 467.6 360 65.3
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 2.6e-129 466.1 366 63.7
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 1.3e-125 453.8 353 61.5
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 3.6e-123 445.7 332 66.3
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 6.2e-123 444.9 362 61.6
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 4.0e-122 442.2 357 59.1
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 6.8e-122 441.4 356 60.7
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 1.2e-121 440.7 315 68.6
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 2.9e-120 436.0 370 60.5
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 2.7e-118 429.5 290 74.1
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 7.8e-118 427.9 361 61.2
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 9.0e-98 361.3 350 56.6
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 1.3e-96 357.5 248 70.6
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 2.5e-95 353.2 230 74.3
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 7.9e-94 348.2 343 51.6
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 4.3e-92 342.4 345 52.2
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 1.3e-91 340.9 341 51.0
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 2.1e-91 340.1 354 46.6
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 5.7e-84 315.5 331 49.2
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 1.8e-74 283.9 301 52.8
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 5.9e-73 278.9 217 66.4
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 7.7e-65 251.9 187 64.2
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 1.3e-64 251.1 486 34.4
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 1.4e-61 241.1 179 65.4
SEGI_02101 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.8e-43 180.3 168 55.4
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.3e-40 171.4 132 61.4
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.3e-40 171.4 132 61.4
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 6.6e-32 142.5 266 36.5
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 1.0e-29 135.2 163 47.2
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.7e-19 101.3 90 52.2
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 3.2e-18 97.1 76 65.8
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 1.0e-16 92.0 88 48.9
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 1.3e-16 91.7 88 45.5
Dinv27585 Davidia involucrata HOM05D007339 ORTHO05D009302 4.7e-14 83.2 54 77.8
Rhsim12G0211900 Rhododendron simsii HOM05D003090 ORTHO05D003495 2.7e-09 67.4 63 54.0


User provided reference genes

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