Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003041 Camellia sinensis var. sinensis HOM05D006065 ORTHO05D007672 2.9e-96 355.5 219 100.0
Rhsim07G0016100 Rhododendron simsii HOM05D006065 ORTHO05D007672 1.7e-19 100.5 199 40.7
vmacro13279 Vaccinium macrocarpon HOM05D006065 ORTHO05D007672 3.7e-19 99.4 182 41.8
Dinv32472 Davidia involucrata HOM05D006065 ORTHO05D007672 2.9e-16 89.7 182 38.5
Actinidia10016 Actinidia chinensis HOM05D006065 ORTHO05D007672 3.8e-16 89.4 210 36.7
Dinv43807 Davidia involucrata HOM05D006065 ORTHO05D007672 1.1e-15 87.8 182 38.5
Haze_15490 Corylus avellana HOM05D006065 ORTHO05D007672 7.2e-15 85.1 192 38.0
Actinidia20914 Actinidia chinensis HOM05D006065 ORTHO05D007672 1.8e-13 80.5 182 37.4
QL08p049008 Quercus lobata HOM05D006065 ORTHO05D007672 3.0e-13 79.7 183 33.9
Cfa003936 Carpinus fangiana HOM05D006065 ORTHO05D007672 1.2e-12 77.8 183 36.1
Potri.014G083100 Populus trichocarpa HOM05D006065 ORTHO05D007672 1.2e-12 77.8 181 35.4
COL.COLO4_12704 Corchorus olitorius HOM05D006065 ORTHO05D007672 5.7e-12 75.5 183 35.5
Sabra14G0060500 Salix brachista HOM05D006065 ORTHO05D007672 5.7e-12 75.5 179 35.2
CiPaw.01G060100 Carya illinoinensis HOM05D006065 ORTHO05D007672 7.5e-12 75.1 183 34.4
Hma1.2p1_0001F.1_g001420 Hydrangea macrophylla HOM05D006065 ORTHO05D007672 1.3e-11 74.3 183 35.0
TAR629G3005 Trochodendron aralioides HOM05D006065 ORTHO05D007672 1.3e-11 74.3 183 33.3
PSO210G7571 Papaver somniferum HOM05D006065 ORTHO05D007672 1.7e-11 73.9 181 36.5
Atru.chr5.461 Acer truncatum HOM05D006065 ORTHO05D007672 2.8e-11 73.2 183 35.0
PSO832G3783 Papaver somniferum HOM05D006065 ORTHO05D007672 4.9e-11 72.4 181 35.4
arahy.Tifrunner.gnm1.ann1.WJC6IK Arachis hypogaea HOM05D006065 ORTHO05D007672 1.8e-10 70.5 182 33.5
MSTRG.4858 Avicennia marina HOM05D006065 ORTHO05D007672 5.4e-10 68.9 183 31.7
CDE06G0574 Ceratophyllum demersum HOM05D006065 ORTHO05D007672 1.2e-09 67.8 182 31.9
Migut.N01441 Erythranthe guttata HOM05D006065 ORTHO05D007672 2.7e-09 66.6 184 32.1
Thecc.01G360200 Theobroma cacao HOM05D006065 ORTHO05D007672 3.5e-09 66.2 183 33.3
Manes.05G035300 Manihot esculenta HOM05D006065 ORTHO05D007672 4.5e-09 65.9 182 31.3
CANSAT56G3634 Cannabis sativa HOM05D006065 ORTHO05D007672 5.9e-09 65.5 183 30.6
Sabra02G0126300 Salix brachista HOM05D006065 ORTHO05D007672 5.9e-09 65.5 179 31.8
Ciclev10022632m.g Citrus clementina HOM05D006065 ORTHO05D007672 1.0e-08 64.7 182 29.7
Lj1g0009386 Lotus japonicus HOM05D006065 ORTHO05D007672 1.3e-08 64.3 183 30.1
Oeu010611.1 Olea europaea HOM05D006065 ORTHO05D007672 1.7e-08 63.9 183 31.1
Hund16927 Selenicereus undatus HOM05D006065 ORTHO05D007672 2.3e-08 63.5 184 29.3
unitig_8.g3395 Utricularia gibba HOM05D006065 ORTHO05D007672 3.8e-08 62.8 182 30.2
arahy.Tifrunner.gnm1.ann1.QD83TI Arachis hypogaea HOM05D006065 ORTHO05D007672 5.0e-08 62.4 182 28.0
Sc01g0003370 Simmondsia chinensis HOM05D006065 ORTHO05D007672 5.0e-08 62.4 183 30.6
CiPaw.02G030100 Carya illinoinensis HOM05D006065 ORTHO05D007672 1.1e-07 61.2 52 65.4
Prupe.2G168300 Prunus persica HOM05D006065 ORTHO05D007672 1.1e-07 61.2 181 30.4
PGR031G0376 Punica granatum HOM05D006065 ORTHO05D007672 1.1e-07 61.2 182 31.9
CAN.G78.55 Capsicum annuum HOM05D006065 ORTHO05D007672 1.5e-07 60.8 183 30.6
Medtr7g076690 Medicago truncatula HOM05D006065 ORTHO05D007672 1.5e-07 60.8 183 29.0
DCAR_006926 Daucus carota HOM05D006065 ORTHO05D007672 3.3e-07 59.7 182 31.9
Gohir.A08G131000 Gossypium hirsutum HOM05D006065 ORTHO05D007672 3.3e-07 59.7 215 26.5
PGSC0003DMG400000036 Solanum tuberosum HOM05D006065 ORTHO05D007672 3.3e-07 59.7 183 30.1
SGA_v2.0_scaffold11G05664 Striga asiatica HOM05D006065 ORTHO05D007672 3.3e-07 59.7 183 30.1
Cc02_g37900 Coffea canephora HOM05D006065 ORTHO05D007672 4.3e-07 59.3 174 30.5
MBI18_g21561_MAGBIO Magnolia biondii HOM05D006065 ORTHO05D007672 4.3e-07 59.3 182 29.7
Phvul.008G067900 Phaseolus vulgaris HOM05D006065 ORTHO05D007672 5.6e-07 58.9 183 27.9
VMungo1383G0981 Vigna mungo HOM05D006065 ORTHO05D007672 5.6e-07 58.9 183 28.4
Ca_07890_v3 Cicer arietinum L. HOM05D006065 ORTHO05D007672 9.5e-07 58.2 182 29.1
TPR.G37820 Trifolium pratense HOM05D006065 ORTHO05D007672 9.5e-07 58.2 183 27.9
Cpa.g.sc18.247 Carica papaya HOM05D006065 ORTHO05D007672 1.2e-06 57.8 183 27.9
Gorai.007G098900 Gossypium raimondii HOM05D006065 ORTHO05D007672 2.1e-06 57.0 184 28.8
Lalb_Chr19g0127061 Lupinus albus HOM05D006065 ORTHO05D007672 2.1e-06 57.0 183 27.3
Sopen01g038320 Solanum pennellii HOM05D006065 ORTHO05D007672 2.1e-06 57.0 183 31.1
MSTRG.28221 Avicennia marina HOM05D006065 ORTHO05D007672 2.8e-06 56.6 183 27.9
TWI59G0879 Tripterygium wilfordii HOM05D006065 ORTHO05D007672 2.8e-06 56.6 184 30.4
Nn1g01520 Nelumbo nucifera HOM05D006065 ORTHO05D007672 4.7e-06 55.8 40 62.5
Duzib138G1923 Durio zibethinus HOM05D006065 ORTHO05D007672 6.1e-06 55.5 183 29.5
Oeu020560.2 Olea europaea HOM05D006065 ORTHO05D007672 6.1e-06 55.5 201 29.9
GSVIVG01018349001 Vitis vinifera HOM05D006065 ORTHO05D007672 6.1e-06 55.5 55 56.4
HanXRQChr13g0426531 Helianthus annuus HOM05D006065 ORTHO05D007672 8.0e-06 55.1 182 27.5


User provided reference genes

Program Settings