Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003026 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D007901 0.0e+00 1090.5 532 100.0
Actinidia32654 Actinidia chinensis HOM05D002451 ORTHO05D007901 4.2e-258 894.4 528 81.1
vmacro06250 Vaccinium macrocarpon HOM05D002451 ORTHO05D007901 1.5e-247 859.4 521 79.8
Hma1.2p1_0571F.1_g180680 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 4.0e-245 851.3 519 78.4
Dinv36690 Davidia involucrata HOM05D002451 ORTHO05D007901 8.2e-238 827.0 489 81.8
Rhsim03G0237000 Rhododendron simsii HOM05D002451 ORTHO05D007901 2.4e-237 825.5 529 76.2
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 8.5e-235 817.0 522 74.7
Atru.chr7.1460 Acer truncatum HOM05D002451 ORTHO05D007901 3.1e-229 798.5 523 72.7
GSVIVG01015305001 Vitis vinifera HOM05D002451 ORTHO05D007901 7.9e-225 783.9 522 73.4
CiPaw.03G225500 Carya illinoinensis HOM05D002451 ORTHO05D007901 6.5e-219 764.2 520 70.6
ClCG11G002150 Citrullus lanatus HOM05D002451 ORTHO05D007901 3.6e-217 758.4 520 71.0
Duzib168G1562 Durio zibethinus HOM05D002451 ORTHO05D007901 4.7e-217 758.1 524 70.4
FAN23G2627 Fragaria x ananassa HOM05D002451 ORTHO05D007901 3.3e-215 751.9 532 68.6
FAN26G3439 Fragaria x ananassa HOM05D002451 ORTHO05D007901 9.7e-215 750.4 532 69.0
RcHm_v2.0_Chr2g0091831 Rosa chinensis HOM05D002451 ORTHO05D007901 9.7e-215 750.4 528 69.5
Lj7A665T28 Lonicera japonica HOM05D002451 ORTHO05D007901 1.7e-214 749.6 627 61.1
Potri.018G087300 Populus trichocarpa HOM05D002451 ORTHO05D007901 3.7e-214 748.4 519 68.8
CANSAT56G2212 Cannabis sativa HOM05D002451 ORTHO05D007901 8.2e-214 747.3 519 68.6
FAN26G0432 Fragaria x ananassa HOM05D002451 ORTHO05D007901 2.4e-213 745.7 532 69.0
FAN28G1338 Fragaria x ananassa HOM05D002451 ORTHO05D007901 7.0e-213 744.2 532 68.0
MBI04_g20306_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D007901 7.0e-213 744.2 524 69.8
Cc06_g10440 Coffea canephora HOM05D002451 ORTHO05D007901 1.2e-212 743.4 526 69.0
CsaV3_2G001930 Cucumis sativus L. HOM05D002451 ORTHO05D007901 5.9e-212 741.1 520 69.0
PGSC0003DMG400000298 Solanum tuberosum HOM05D002451 ORTHO05D007901 5.9e-212 741.1 522 69.5
Gorai.009G027400 Gossypium raimondii HOM05D002451 ORTHO05D007901 5.0e-211 738.0 521 69.3
Aqoxy7G01412 Aquilegia oxysepala HOM05D002451 ORTHO05D007901 1.1e-210 736.9 524 67.7
MD02G1065300 Malus domestica HOM05D002451 ORTHO05D007901 1.1e-210 736.9 525 67.4
Nitab4.5_0005668g0020 Nicotiana tabacum HOM05D002451 ORTHO05D007901 4.2e-210 734.9 512 69.3
Lalb_Chr05g0223211 Lupinus albus HOM05D002451 ORTHO05D007901 7.2e-210 734.2 521 68.5
Sopen12g003400 Solanum pennellii HOM05D002451 ORTHO05D007901 9.4e-210 733.8 522 69.0
Oeu053181.2 Olea europaea HOM05D002451 ORTHO05D007901 3.6e-209 731.9 521 69.9
Solyc12g008450.2 Solanum lycopersicum HOM05D002451 ORTHO05D007901 1.0e-208 730.3 522 68.8
Eucgr.C00999 Eucalyptus grandis HOM05D002451 ORTHO05D007901 1.7e-206 723.0 518 67.4
MSTRG.10604 Avicennia marina HOM05D002451 ORTHO05D007901 6.3e-206 721.1 524 67.6
Lj4g0024953 Lotus japonicus HOM05D002451 ORTHO05D007901 2.7e-204 715.7 527 66.4
Psat7g017040 Pisum sativum HOM05D002451 ORTHO05D007901 2.9e-203 712.2 524 66.6
Sc08g0008000 Simmondsia chinensis HOM05D002451 ORTHO05D007901 3.8e-203 711.8 512 67.0
Medtr8g102540 Medicago truncatula HOM05D002451 ORTHO05D007901 3.6e-201 705.3 522 67.4
AT2G40570 Arabidopsis thaliana HOM05D002451 ORTHO05D007901 5.4e-197 691.4 520 64.8
EL10Ac8g18383 Beta vulgaris HOM05D002451 ORTHO05D007901 7.0e-197 691.0 539 64.2
Glyma.05G227000 Glycine max HOM05D002451 ORTHO05D007901 1.2e-196 690.3 527 65.8
arahy.Tifrunner.gnm1.ann1.GUCG30 Arachis hypogaea HOM05D002451 ORTHO05D007901 3.5e-196 688.7 523 64.2
MELO3C004587.2 Cucumis melo HOM05D002451 ORTHO05D007901 4.5e-196 688.3 512 66.4
CARHR135670 Cardamine hirsuta HOM05D002451 ORTHO05D007901 7.7e-196 687.6 527 64.3
AL4G38420 Arabidopsis lyrata HOM05D002451 ORTHO05D007901 1.3e-195 686.8 519 65.3
Sp4g22900 Schrenkiella parvula HOM05D002451 ORTHO05D007901 5.5e-194 681.4 514 64.0
Hma1.2p1_0571F.1_g180690 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 1.6e-193 679.9 424 76.9
BcaB06g29152 Brassica carinata HOM05D002451 ORTHO05D007901 2.1e-193 679.5 515 64.3
COL.COLO4_34751 Corchorus olitorius HOM05D002451 ORTHO05D007901 8.0e-193 677.6 519 64.9
Lsat_1_v5_gn_7_39761 Lactuca sativa HOM05D002451 ORTHO05D007901 8.0e-193 677.6 512 64.6
BolC4t28342H Brassica oleracea HOM05D002451 ORTHO05D007901 4.0e-192 675.2 521 63.7
THA.LOC104807537 Tarenaya hassleriana HOM05D002451 ORTHO05D007901 5.2e-192 674.9 526 63.3
TWI34G1500 Tripterygium wilfordii HOM05D002451 ORTHO05D007901 6.8e-192 674.5 478 69.2
HPP92_009804 Vanilla planifolia HOM05D002451 ORTHO05D007901 7.5e-191 671.0 526 62.7
BcaC02g07322 Brassica carinata HOM05D002451 ORTHO05D007901 9.8e-191 670.6 521 63.0
Thhalv10016464m.g Eutrema salsugineum HOM05D002451 ORTHO05D007901 2.2e-190 669.5 546 61.5
Migut.K00538 Erythranthe guttata HOM05D002451 ORTHO05D007901 1.4e-189 666.8 517 64.2
ATR0705G045 Amborella trichopoda HOM05D002451 ORTHO05D007901 2.4e-189 666.0 532 61.1
Sabra18G0075400 Salix brachista HOM05D002451 ORTHO05D007901 3.2e-189 665.6 568 60.0
C04p68410 Brassica napus HOM05D002451 ORTHO05D007901 4.1e-189 665.2 526 62.7
A04p31020 Brassica napus HOM05D002451 ORTHO05D007901 5.4e-189 664.8 521 62.6
BraA04t18559Z Brassica rapa HOM05D002451 ORTHO05D007901 7.8e-188 661.0 521 62.4
Ca_17363_v3 Cicer arietinum L. HOM05D002451 ORTHO05D007901 1.5e-186 656.8 479 67.4
DCAR_012039 Daucus carota HOM05D002451 ORTHO05D007901 9.5e-186 654.1 474 67.1
Ah.14g083250 Amaranthus hybridus HOM05D002451 ORTHO05D007901 3.7e-182 642.1 514 62.3
SHI02693 Sapria himalayana HOM05D002451 ORTHO05D007901 1.1e-181 640.6 530 60.0
Aa31LG3G1530 Aethionema arabicum HOM05D002451 ORTHO05D007901 6.0e-180 634.8 619 53.0
Peaxi162Scf00665g00035 Petunia axillaris HOM05D002451 ORTHO05D007901 6.0e-180 634.8 526 61.2
PSO063G0860 Papaver somniferum HOM05D002451 ORTHO05D007901 3.9e-179 632.1 470 66.6
SalBow1G3696 Salvia bowleyana HOM05D002451 ORTHO05D007901 5.0e-179 631.7 531 61.6
PGR142G3373 Punica granatum HOM05D002451 ORTHO05D007901 8.6e-179 630.9 469 65.5
TPR.G23434 Trifolium pratense HOM05D002451 ORTHO05D007901 1.9e-178 629.8 477 65.0
Sed0018496 Sechium edule HOM05D002451 ORTHO05D007901 2.5e-178 629.4 451 65.9
SalBow1G8658 Salvia bowleyana HOM05D002451 ORTHO05D007901 4.3e-178 628.6 534 61.2
Os06g0555500 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D007901 1.4e-176 623.6 523 59.7
AUR62010914 Chenopodium quinoa HOM05D002451 ORTHO05D007901 6.4e-174 614.8 524 60.3
Nn8g39075 Nelumbo nucifera HOM05D002451 ORTHO05D007901 1.7e-171 606.7 449 66.8
VMungo0251G0535 Vigna mungo HOM05D002451 ORTHO05D007901 4.3e-170 602.1 457 65.6
Cfa003184 Carpinus fangiana HOM05D002451 ORTHO05D007901 2.1e-169 599.7 409 72.1
Manes.16G108300 Manihot esculenta HOM05D002451 ORTHO05D007901 2.8e-169 599.4 424 67.7
Prupe.7G220200 Prunus persica HOM05D002451 ORTHO05D007901 3.6e-169 599.0 427 69.1
Hund09106 Selenicereus undatus HOM05D002451 ORTHO05D007901 5.2e-168 595.1 605 53.9
FAN19G3003 Fragaria x ananassa HOM05D002451 ORTHO05D007901 5.8e-167 591.7 418 69.6
Ciclev10008594m.g Citrus clementina HOM05D002451 ORTHO05D007901 5.1e-163 578.6 379 72.0
SEGI_00986 Sequoiadendron giganteum HOM05D002451 ORTHO05D007901 1.9e-162 576.6 542 53.1
SGA_v2.0_scaffold843G53664 Striga asiatica HOM05D002451 ORTHO05D007901 4.9e-158 562.0 452 61.7
Thecc.09G101000 Theobroma cacao HOM05D002451 ORTHO05D007901 2.4e-157 559.7 405 66.4
FvH4_1g06070 Fragaria vesca HOM05D002451 ORTHO05D007901 7.8e-156 554.7 414 66.7
CAN.G1241.33 Capsicum annuum HOM05D002451 ORTHO05D007901 1.0e-155 554.3 377 71.4
Zm00001eb384640 Zea mays HOM05D002451 ORTHO05D007901 2.8e-153 546.2 471 57.7
Gohir.A05G025800 Gossypium hirsutum HOM05D002451 ORTHO05D007901 3.6e-153 545.8 405 66.9
Mapoly0002s0306 Marchantia polymorpha HOM05D002451 ORTHO05D007901 2.1e-145 520.0 549 49.4
Pp3c1_19270 Physcomitrium patens HOM05D002451 ORTHO05D007901 6.2e-145 518.5 573 47.5
CAN.G1642.1 Capsicum annuum HOM05D002451 ORTHO05D007901 5.8e-143 511.9 417 61.6
AagrBONN_evm.TU.Sc2ySwM_117.4166 Anthoceros agrestis HOM05D002451 ORTHO05D007901 3.2e-141 506.1 516 51.0
Phvul.002G309000 Phaseolus vulgaris HOM05D002451 ORTHO05D007901 1.6e-140 503.8 406 63.1
SpUn0061_0010 Schrenkiella parvula HOM05D002451 ORTHO05D007901 1.3e-139 500.7 369 65.9
HanXRQChr09g0238871 Helianthus annuus HOM05D002451 ORTHO05D007901 1.8e-139 500.4 379 64.9
AUR62021412 Chenopodium quinoa HOM05D002451 ORTHO05D007901 3.3e-138 496.1 444 57.7
TAR636G1745 Trochodendron aralioides HOM05D002451 ORTHO05D007901 2.1e-132 476.9 385 63.4
Carub.0004s2284 Capsella rubella HOM05D002451 ORTHO05D007901 1.9e-130 470.3 386 61.7
SMO118G0195 Selaginella moellendorffii HOM05D002451 ORTHO05D007901 7.9e-124 448.4 538 45.4
CDE08G0666 Ceratophyllum demersum HOM05D002257 ORTHO05D007901 7.7e-119 431.8 379 56.7
MD15G1196200 Malus domestica HOM05D002451 ORTHO05D007901 3.0e-107 393.3 523 43.8
SGA_v2.0_scaffold19G08736 Striga asiatica HOM05D002451 ORTHO05D007901 2.7e-100 370.2 266 67.7
Gohir.D05G027300 Gossypium hirsutum HOM05D002451 ORTHO05D007901 6.3e-97 359.0 260 69.2
ECA240G2417 Erigeron canadensis HOM05D002451 ORTHO05D007901 3.2e-85 320.1 423 44.4
CBR_g41536 Chara braunii HOM05D002451 ORTHO05D007901 6.3e-81 305.8 511 37.0
SGA_v2.0_scaffold4172G54434 Striga asiatica HOM05D002451 ORTHO05D007901 1.6e-79 301.2 240 61.2
unitig_46.g18399 Utricularia gibba HOM05D002451 ORTHO05D007901 5.9e-71 272.7 269 54.6
MCO03G573 Micromonas commoda HOM05D002451 ORTHO05D007901 1.3e-62 245.0 589 31.4
QL02p041683 Quercus lobata HOM05D002451 ORTHO05D007901 3.0e-62 243.8 143 79.7
SGA_v2.0_scaffold19G08729 Striga asiatica HOM05D002451 ORTHO05D007901 4.9e-57 226.5 136 75.7
CDE02G1621 Ceratophyllum demersum HOM05D002451 ORTHO05D007901 2.9e-49 200.7 149 65.8
PRCOL_00006066 Prasinoderma coloniale HOM05D000173 ORTHO05D004400 3.2e-48 197.2 566 29.0
CAN.G4309.1 Capsicum annuum HOM05D002451 ORTHO05D007901 7.8e-47 192.6 143 65.7
Nn1g07675 Nelumbo nucifera HOM05D002451 ORTHO05D007901 8.9e-43 179.1 114 72.8
Cre06.g272100 Chlamydomonas reinhardtii HOM05D002451 ORTHO05D007901 8.4e-41 172.6 128 59.4
Cpa.g.sc40.100 Carica papaya HOM05D002451 ORTHO05D007901 7.8e-39 166.0 94 80.9
Nitab4.5_0000566g0090 Nicotiana tabacum HOM05D002451 ORTHO05D007901 2.3e-38 164.5 95 80.0
Cpa.g.c44357 Carica papaya HOM05D002451 ORTHO05D007901 5.1e-38 163.3 139 59.7
unitig_46.g18400 Utricularia gibba HOM05D002451 ORTHO05D007901 1.2e-34 152.1 93 76.3
Ciclev10010851m.g Citrus clementina HOM05D002451 ORTHO05D007901 9.9e-26 122.5 76 76.3
CBR_g41538 Chara braunii HOM05D002451 ORTHO05D007901 6.5e-17 93.2 110 43.6
TAR636G3106 Trochodendron aralioides HOM05D002451 ORTHO05D007901 1.1e-16 92.4 56 71.4
TPR.G23499 Trifolium pratense HOM05D002451 ORTHO05D007901 5.1e-14 83.6 53 71.7


User provided reference genes

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