Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002990 Camellia sinensis var. sinensis HOM05D004142 ORTHO05D005411 0.0e+00 1221.5 648 100.0
CSS0014725 Camellia sinensis var. sinensis HOM05D004142 ORTHO05D005411 4.0e-311 1070.8 659 88.0
CSS0035317 Camellia sinensis var. sinensis HOM05D004142 ORTHO05D005411 5.2e-303 1043.9 659 85.3
CSS0034003 Camellia sinensis var. sinensis HOM05D004142 ORTHO05D005411 1.7e-253 879.4 657 76.9
Dinv14174 Davidia involucrata HOM05D004142 ORTHO05D005411 6.7e-242 840.9 668 69.8
Actinidia20577 Actinidia chinensis HOM05D004142 ORTHO05D005411 3.0e-234 815.5 664 68.5
Rhsim11G0198100 Rhododendron simsii HOM05D004142 ORTHO05D005411 1.5e-233 813.1 645 68.8
Actinidia17993 Actinidia chinensis HOM05D004142 ORTHO05D005411 7.4e-233 810.8 666 68.5
Cfa005371 Carpinus fangiana HOM05D004142 ORTHO05D005411 1.2e-219 766.9 661 63.7
QL11p056391 Quercus lobata HOM05D004142 ORTHO05D005411 2.9e-213 745.7 663 63.8
Atru.chr3.3247 Acer truncatum HOM05D004142 ORTHO05D005411 8.5e-213 744.2 668 61.5
Ciclev10028022m.g Citrus clementina HOM05D004142 ORTHO05D005411 7.2e-212 741.1 651 63.3
TAR633G0693 Trochodendron aralioides HOM05D004142 ORTHO05D005411 3.0e-210 735.7 667 62.7
Thecc.02G146100 Theobroma cacao HOM05D004142 ORTHO05D005411 1.1e-209 733.8 671 60.4
Lj5C171T17 Lonicera japonica HOM05D004142 ORTHO05D005411 1.5e-209 733.4 719 58.8
Sopen10g027050 Solanum pennellii HOM05D004142 ORTHO05D005411 2.0e-206 723.0 644 62.3
Duzib052G0377 Durio zibethinus HOM05D004142 ORTHO05D005411 1.5e-204 716.8 667 60.0
TWI75G0433 Tripterygium wilfordii HOM05D004142 ORTHO05D005411 5.5e-204 714.9 644 62.1
Eucgr.G01885 Eucalyptus grandis HOM05D004142 ORTHO05D005411 9.4e-204 714.1 642 61.5
Potri.009G168100 Populus trichocarpa HOM05D004142 ORTHO05D005411 1.2e-203 713.8 643 61.4
Haze_02000 Corylus avellana HOM05D004142 ORTHO05D005411 1.6e-203 713.4 696 58.9
Gohir.A13G065000 Gossypium hirsutum HOM05D004142 ORTHO05D005411 1.6e-203 713.4 666 60.1
Solyc10g074560.2 Solanum lycopersicum HOM05D004142 ORTHO05D005411 1.0e-202 710.7 615 63.4
vmacro02340 Vaccinium macrocarpon HOM05D004142 ORTHO05D005411 1.8e-202 709.9 664 63.0
Prupe.8G180000 Prunus persica HOM05D004142 ORTHO05D005411 2.3e-202 709.5 671 59.0
CAN.G765.24 Capsicum annuum HOM05D004142 ORTHO05D005411 3.0e-202 709.1 641 61.2
Peaxi162Scf01986g00004 Petunia axillaris HOM05D004142 ORTHO05D005411 5.2e-202 708.4 642 62.3
CiPaw.06G115400 Carya illinoinensis HOM05D004142 ORTHO05D005411 2.0e-201 706.4 662 60.7
Gorai.013G064000 Gossypium raimondii HOM05D004142 ORTHO05D005411 2.6e-201 706.1 666 59.5
Gohir.D13G057300 Gossypium hirsutum HOM05D004142 ORTHO05D005411 5.7e-201 704.9 666 59.6
MD10G1141700 Malus domestica HOM05D004142 ORTHO05D005411 7.5e-201 704.5 665 58.8
CANSAT25G0210 Cannabis sativa HOM05D004142 ORTHO05D005411 6.3e-200 701.4 633 61.5
Manes.04G066800 Manihot esculenta HOM05D004142 ORTHO05D005411 1.1e-199 700.7 644 61.0
PGR042G3440 Punica granatum HOM05D004142 ORTHO05D005411 8.5e-197 691.0 652 59.7
Glyma.14G215500 Glycine max HOM05D004142 ORTHO05D005411 2.3e-194 682.9 624 58.8
Phvul.008G235900 Phaseolus vulgaris HOM05D004142 ORTHO05D005411 8.8e-194 681.0 628 59.7
RcHm_v2.0_Chr6g0280901 Rosa chinensis HOM05D004142 ORTHO05D005411 1.2e-193 680.6 667 56.5
FAN24G0393 Fragaria x ananassa HOM05D004142 ORTHO05D005411 3.4e-193 679.1 672 57.3
Glyma.02G245400 Glycine max HOM05D004142 ORTHO05D005411 1.8e-191 673.3 612 59.0
Lalb_Chr04g0251341 Lupinus albus HOM05D004142 ORTHO05D005411 1.2e-190 670.6 641 57.9
Psat2g043640 Pisum sativum HOM05D004142 ORTHO05D005411 5.0e-189 665.2 646 57.7
VMungo0647G1269 Vigna mungo HOM05D004142 ORTHO05D005411 8.6e-189 664.5 630 57.9
Medtr5g078780 Medicago truncatula HOM05D004142 ORTHO05D005411 1.9e-188 663.3 644 57.5
Sed0023655 Sechium edule HOM05D004142 ORTHO05D005411 2.5e-188 662.9 659 58.1
TWI31G1182 Tripterygium wilfordii HOM05D004142 ORTHO05D005411 2.5e-188 662.9 640 60.2
DCAR_005486 Daucus carota HOM05D004142 ORTHO05D005411 5.5e-188 661.8 645 58.3
Sabra09G0130600 Salix brachista HOM05D004142 ORTHO05D005852 5.5e-188 661.8 611 60.7
SGA_v2.0_scaffold98G29302 Striga asiatica HOM05D004142 ORTHO05D005411 2.0e-185 653.3 628 59.4
SalBow5G4664 Salvia bowleyana HOM05D004142 ORTHO05D005411 1.3e-184 650.6 632 59.7
MSTRG.27614 Avicennia marina HOM05D004142 ORTHO05D005411 1.7e-184 650.2 616 58.3
SalBow5G1400 Salvia bowleyana HOM05D004142 ORTHO05D005411 1.7e-184 650.2 633 59.6
EL10Ac9g21530 Beta vulgaris HOM05D004142 ORTHO05D005411 2.8e-184 649.4 617 57.9
Nn5g31006 Nelumbo nucifera HOM05D004142 ORTHO05D005411 1.1e-183 647.5 665 57.6
COL.COLO4_34310 Corchorus olitorius HOM05D004142 ORTHO05D005411 1.8e-183 646.7 669 56.1
Cc09_g10830 Coffea canephora HOM05D004142 ORTHO05D005411 2.0e-182 643.3 644 56.4
Nitab4.5_0005657g0020 Nicotiana tabacum HOM05D004142 ORTHO05D005411 4.5e-182 642.1 649 58.2
FAN15G2670 Fragaria x ananassa HOM05D004142 ORTHO05D005411 1.3e-181 640.6 679 54.3
Aa31LG8G14620 Aethionema arabicum HOM05D004142 ORTHO05D005411 1.7e-181 640.2 641 56.3
TPR.G8874 Trifolium pratense HOM05D004142 ORTHO05D005411 2.3e-181 639.8 643 55.5
CARHR293590 Cardamine hirsuta HOM05D004142 ORTHO05D005411 3.8e-181 639.0 643 55.5
Thhalv10022610m.g Eutrema salsugineum HOM05D004142 ORTHO05D005411 5.0e-181 638.6 649 55.6
CsaV3_7G001920 Cucumis sativus L. HOM05D004142 ORTHO05D005411 1.5e-180 637.1 642 56.9
BcaB07g31738 Brassica carinata HOM05D004142 ORTHO05D005411 3.3e-180 636.0 645 55.0
Sp3g30590 Schrenkiella parvula HOM05D004142 ORTHO05D005411 6.1e-179 631.7 648 55.2
AL3G50110 Arabidopsis lyrata HOM05D004142 ORTHO05D005411 8.0e-179 631.3 636 54.1
LjContig00141g0017492 Lotus japonicus HOM05D004142 ORTHO05D005411 3.0e-178 629.4 632 57.6
MELO3C013248.2 Cucumis melo HOM05D004142 ORTHO05D005411 4.0e-178 629.0 665 55.2
Ah.05g178840 Amaranthus hybridus HOM05D004142 ORTHO05D005411 9.8e-177 624.4 615 57.4
HanXRQChr09g0239911 Helianthus annuus HOM05D004142 ORTHO05D005411 3.7e-176 622.5 606 58.6
HanXRQChr16g0515111 Helianthus annuus HOM05D004142 ORTHO05D005411 3.7e-176 622.5 612 58.0
A07p03800 Brassica napus HOM05D004142 ORTHO05D005411 1.1e-175 620.9 650 54.0
C09p13280 Brassica napus HOM05D004142 ORTHO05D005411 1.8e-175 620.2 659 54.9
BolC9t54221H Brassica oleracea HOM05D004142 ORTHO05D005411 1.8e-175 620.2 659 54.9
Hund06363 Selenicereus undatus HOM05D004142 ORTHO05D005411 3.2e-175 619.4 609 56.8
BraA07t28174Z Brassica rapa HOM05D004142 ORTHO05D005411 5.4e-175 618.6 649 53.3
AT2G17250 Arabidopsis thaliana HOM05D004142 ORTHO05D005411 7.0e-175 618.2 633 54.5
BcaB03g16472 Brassica carinata HOM05D004142 ORTHO05D005411 3.5e-174 615.9 623 54.9
Aqoxy6G01597 Aquilegia oxysepala HOM05D004142 ORTHO05D005411 5.9e-174 615.1 666 55.4
ECA233G5375 Erigeron canadensis HOM05D004142 ORTHO05D005411 7.8e-174 614.8 627 55.8
Lsat_1_v5_gn_5_183861 Lactuca sativa HOM05D004142 ORTHO05D005411 7.8e-174 614.8 626 57.0
BcaC04g22983 Brassica carinata HOM05D004142 ORTHO05D005411 1.0e-173 614.4 653 53.1
Sc08g0002210 Simmondsia chinensis HOM05D004142 ORTHO05D005411 1.0e-173 614.4 605 57.5
A09p11250 Brassica napus HOM05D004142 ORTHO05D005411 3.0e-173 612.8 649 53.2
BraA09t36766Z Brassica rapa HOM05D004142 ORTHO05D005411 7.3e-172 608.2 648 52.8
Ca_01556_v3 Cicer arietinum L. HOM05D004142 ORTHO05D005411 1.6e-171 607.1 663 52.6
THA.LOC104819692 Tarenaya hassleriana HOM05D004142 ORTHO05D005411 2.8e-171 606.3 675 52.9
Migut.B01359 Erythranthe guttata HOM05D004142 ORTHO05D005411 1.1e-170 604.4 641 55.4
CDE05G3311 Ceratophyllum demersum HOM05D004142 ORTHO05D005411 2.6e-169 599.7 646 52.0
ClCG02G003400 Citrullus lanatus HOM05D004142 ORTHO05D005411 7.5e-169 598.2 639 54.8
Carub.0003s3119 Capsella rubella HOM05D004142 ORTHO05D005411 1.7e-168 597.0 629 52.5
Atru.chr5.3556 Acer truncatum HOM05D004142 ORTHO05D005411 3.7e-168 595.9 640 54.5
arahy.Tifrunner.gnm1.ann1.FRA838 Arachis hypogaea HOM05D004142 ORTHO05D005411 1.0e-165 587.8 663 51.9
arahy.Tifrunner.gnm1.ann1.52DH7S Arachis hypogaea HOM05D004142 ORTHO05D005411 1.2e-163 580.9 665 50.8
Nitab4.5_0001700g0140 Nicotiana tabacum HOM05D004142 ORTHO05D005411 1.8e-162 577.0 661 54.2
PSO541G0415 Papaver somniferum HOM05D004142 ORTHO05D005411 3.7e-160 569.3 656 50.3
arahy.Tifrunner.gnm1.ann1.0H97XI Arachis hypogaea HOM05D004142 ORTHO05D005411 1.9e-159 567.0 664 50.6
PSO675G0945 Papaver somniferum HOM05D004142 ORTHO05D005411 8.6e-157 558.1 621 51.5
CAN.G397.37 Capsicum annuum HOM05D004142 ORTHO05D005411 1.4e-154 550.8 546 57.5
ATR0807G091 Amborella trichopoda HOM05D004142 ORTHO05D005411 4.0e-154 549.3 651 50.2
Os04g0585300 Oryza sativa ssp. japonica HOM05D004142 ORTHO05D005411 5.4e-151 538.9 640 49.2
Zm00001eb428130 Zea mays HOM05D004142 ORTHO05D005411 1.2e-150 537.7 637 47.1
BcaC06g36246 Brassica carinata HOM05D004142 ORTHO05D005411 1.6e-150 537.3 636 50.3
AUR62013175 Chenopodium quinoa HOM05D004142 ORTHO05D005411 3.0e-149 533.1 628 51.0
BolC7t41018H Brassica oleracea HOM05D004142 ORTHO05D005411 4.3e-148 529.3 601 51.2
FvH4_2g16780 Fragaria vesca HOM05D004142 ORTHO05D005411 2.8e-147 526.6 542 55.9
C07p06050 Brassica napus HOM05D004142 ORTHO05D005411 1.9e-143 513.8 635 49.3
MD05G1138800 Malus domestica HOM05D004142 ORTHO05D005411 2.6e-137 493.4 665 48.0
TAR381G0855 Trochodendron aralioides HOM05D004142 ORTHO05D005411 3.1e-130 469.9 502 57.0
AUR62010174 Chenopodium quinoa HOM05D004142 ORTHO05D005411 3.7e-123 446.4 497 53.5
Mapoly0043s0054 Marchantia polymorpha HOM05D004142 ORTHO05D005411 3.4e-121 439.9 637 42.7
unitig_578.g16758 Utricularia gibba HOM05D004142 ORTHO05D005411 6.7e-117 425.6 599 45.1
Pp3c9_12610 Physcomitrium patens HOM05D004142 ORTHO05D005411 4.8e-107 392.9 667 39.3
AagrBONN_evm.TU.Sc2ySwM_228.5327 Anthoceros agrestis HOM05D004142 ORTHO05D005411 4.1e-106 389.8 655 38.9
Oeu037462.1 Olea europaea HOM05D004142 ORTHO05D005411 3.6e-94 350.1 406 52.2
BcaB07g31740 Brassica carinata HOM05D004142 ORTHO05D005411 1.8e-90 337.8 404 50.5
Cpa.g.sc60.17 Carica papaya HOM05D004142 ORTHO05D005411 2.8e-83 313.9 357 53.8
SHI03795 Sapria himalayana HOM05D004142 ORTHO05D005411 5.0e-80 303.1 253 64.4
SMO338G0043 Selaginella moellendorffii HOM05D004142 ORTHO05D005411 5.5e-79 299.7 582 37.3
GSVIVG01004114001 Vitis vinifera HOM05D004142 ORTHO05D005411 8.3e-67 259.2 228 61.4
CBR_g44269 Chara braunii HOM05D004142 ORTHO05D005411 4.1e-66 256.9 361 44.3
ECA246G3488 Erigeron canadensis HOM05D004142 ORTHO05D005411 3.8e-64 250.4 385 44.2
CSS0025136 Camellia sinensis var. sinensis HOM05D004142 ORTHO05D005411 5.0e-64 250.0 181 80.7
MD11G1014400 Malus domestica HOM05D004142 ORTHO05D005411 2.5e-63 247.7 378 43.4
HPP92_025664 Vanilla planifolia HOM05D004142 ORTHO05D005411 2.1e-62 244.6 280 52.5
Cpa.g.sc60.19 Carica papaya HOM05D004142 ORTHO05D005411 7.5e-60 236.1 229 55.0
Ca_05793_v3 Cicer arietinum L. HOM05D004142 ORTHO05D005411 1.4e-58 231.9 206 56.8
Eucgr.H04975 Eucalyptus grandis HOM05D004142 ORTHO05D005411 1.3e-56 225.3 239 51.9
PRCOL_00005396 Prasinoderma coloniale HOM05D004142 ORTHO05D005411 3.7e-51 207.2 296 40.9
Cre01.g068377 Chlamydomonas reinhardtii HOM05D004142 ORTHO05D005411 4.1e-50 203.8 318 38.1
Hma1.2p1_0796F.1_g219330 Hydrangea macrophylla HOM05D004142 ORTHO05D005411 4.3e-47 193.7 121 77.7
TAR318G0001 Trochodendron aralioides HOM05D004142 ORTHO05D005411 4.0e-45 187.2 181 58.0
Oeu037461.1 Olea europaea HOM05D004142 ORTHO05D005411 2.9e-43 181.0 105 84.8
GSVIVG01004442001 Vitis vinifera HOM05D004142 ORTHO05D005411 3.7e-43 180.6 158 63.3
SHI03796 Sapria himalayana HOM05D004142 ORTHO05D005411 1.6e-41 175.3 182 47.8
HPP92_025663 Vanilla planifolia HOM05D004142 ORTHO05D005411 3.3e-39 167.5 199 47.2
Lsat_1_v5_gn_5_64620 Lactuca sativa HOM05D004142 ORTHO05D005411 4.3e-39 167.2 134 68.7
MCO08G220 Micromonas commoda HOM05D004142 ORTHO05D005411 1.2e-36 159.1 231 39.0
AagrBONN_evm.TU.Sc2ySwM_228.5299 Anthoceros agrestis HOM05D004142 ORTHO05D005411 3.5e-33 147.5 163 52.8
SEGI_03267 Sequoiadendron giganteum HOM05D004142 ORTHO05D005411 3.5e-33 147.5 118 63.6
SEGI_12604 Sequoiadendron giganteum HOM05D004142 ORTHO05D005411 4.6e-33 147.1 118 62.7
Hma1.2p1_0151F.1_g067370 Hydrangea macrophylla HOM05D004142 ORTHO05D005411 2.4e-29 134.8 116 67.2
Cfa024410 Carpinus fangiana HOM05D004142 ORTHO05D005411 4.0e-29 134.0 283 32.5
BcaB07g31739 Brassica carinata HOM05D004142 ORTHO05D005411 5.8e-28 130.2 231 38.5
SEGI_26341 Sequoiadendron giganteum HOM05D004142 ORTHO05D005411 2.2e-27 128.3 119 59.7
FAN27G1246 Fragaria x ananassa HOM05D004142 ORTHO05D005411 6.4e-27 126.7 128 62.5
Zm00001eb152690 Zea mays HOM05D004142 ORTHO05D000502 8.4e-27 126.3 102 63.7
BcaB07g31742 Brassica carinata HOM05D004142 ORTHO05D005411 6.0e-25 120.2 185 42.2
Oeu003432.1 Olea europaea HOM05D004142 ORTHO05D005411 7.3e-23 113.2 112 53.6
Psat3g160080 Pisum sativum HOM05D004142 ORTHO05D005411 8.4e-19 99.8 143 42.0
SEGI_29991 Sequoiadendron giganteum HOM05D004142 ORTHO05D031210 3.2e-18 97.8 178 34.8
CSS0016900 Camellia sinensis var. sinensis HOM05D005838 ORTHO05D007177 5.4e-18 97.1 77 66.2
AagrBONN_evm.TU.Sc2ySwM_228.5300 Anthoceros agrestis HOM05D004142 ORTHO05D005411 2.7e-17 94.7 92 50.0
BcaC04g22984 Brassica carinata HOM05D004142 ORTHO05D005411 3.0e-16 91.3 103 50.5
Medtr5g078810 Medicago truncatula HOM05D004142 ORTHO05D005411 3.9e-16 90.9 79 62.0
Lsat_1_v5_gn_5_140320 Lactuca sativa HOM05D004142 ORTHO05D036439 2.5e-15 88.2 150 42.7
Zm00001eb177550 Zea mays HOM05D004142 ORTHO05D005411 2.5e-15 88.2 87 59.8
Zm00001eb282240 Zea mays HOM05D004142 ORTHO05D005411 5.6e-15 87.0 87 59.8
MD11G1014300 Malus domestica HOM05D004142 ORTHO05D005411 7.4e-15 86.7 89 57.3
TPR.G40409 Trifolium pratense HOM05D004142 ORTHO05D005411 1.1e-13 82.8 65 67.7
Eucgr.H04983 Eucalyptus grandis HOM05D004142 ORTHO05D005411 1.2e-12 79.3 70 61.4
Zm00001eb112060 Zea mays HOM05D004142 ORTHO05D005983 3.2e-10 71.2 74 59.5
RcHm_v2.0_Chr1g0336401 Rosa chinensis HOM05D004142 ORTHO05D005411 2.1e-09 68.6 49 59.2
RcHm_v2.0_Chr7g0239681 Rosa chinensis HOM05D004142 ORTHO05D005411 2.3e-08 65.1 48 58.3
SEGI_00997 Sequoiadendron giganteum HOM05D004142 ORTHO05D031210 1.1e-07 62.8 123 34.1


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