Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002979 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-56 222.6 110 100.0
CSS0025864 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-43 179.5 109 82.6
CSS0045539 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.4e-28 127.5 99 69.7
CSS0042232 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-27 125.6 99 68.7
CSS0039053 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.4e-27 124.4 97 69.1
Atru.chr1.2464 Acer truncatum HOM05D000002 ORTHO05D000001 2.0e-21 105.9 88 61.4
CSS0017162 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-20 102.8 62 83.9
Atru.chr2.2580 Acer truncatum HOM05D000002 ORTHO05D000001 4.9e-20 101.3 103 51.5
CSS0011046 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.1e-19 98.2 102 52.0
Hma1.2p1_0067F.1_g037120 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.0e-18 94.4 99 51.5
Hma1.2p1_0682F.1_g202600 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.3e-17 92.4 107 46.7
Atru.chr2.2332 Acer truncatum HOM05D000002 ORTHO05D000001 3.9e-17 91.7 101 48.5
Nn1g00402 Nelumbo nucifera HOM05D000002 ORTHO05D000001 7.3e-16 87.4 113 42.5
Hma1.2p1_0576F.1_g181890 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.6e-16 87.0 69 62.3
SHI23044 Sapria himalayana HOM05D000002 ORTHO05D000001 9.6e-16 87.0 102 47.1
Nn8g39601 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.8e-15 85.5 105 47.6
Nn2g11549 Nelumbo nucifera HOM05D000002 ORTHO05D000001 9.0e-14 80.5 83 48.2
Atru.chr1.2399 Acer truncatum HOM05D000002 ORTHO05D000001 1.5e-13 79.7 61 62.3
SHI29540 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-13 78.6 65 56.9
Sp7g09245 Schrenkiella parvula HOM05D000002 ORTHO05D000001 2.9e-12 75.5 105 42.9
Atru.chr5.2279 Acer truncatum HOM05D000002 ORTHO05D000001 8.4e-12 73.9 62 61.3
THA.LOC104801935 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.1e-11 73.6 108 41.7
THA.LOC109115967 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.9e-11 72.8 89 44.9
Potri.019G029850 Populus trichocarpa HOM05D000002 ORTHO05D000001 2.4e-11 72.4 91 46.2
THA.LOC104824784 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 4.2e-11 71.6 86 47.7
THA.LOC109116120 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 7.1e-11 70.9 107 41.1
Sp4g06215 Schrenkiella parvula HOM05D000002 ORTHO05D000001 1.2e-10 70.1 115 36.5
SHI27818 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-10 69.3 80 42.5
THA.LOC104806172 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.1e-10 69.3 80 46.2
THA.LOC104815444 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.1e-10 69.3 80 46.2
THA.LOC104807900 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 7.8e-10 67.4 104 37.5
Thhalv10011941m.g Eutrema salsugineum HOM05D000002 ORTHO05D000001 1.0e-09 67.0 65 49.2
THA.LOC104807052 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.0e-09 67.0 98 43.9
THA.LOC104817067 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.0e-09 67.0 89 41.6
THA.LOC109116241 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.0e-09 67.0 98 43.9
ECA233G3042 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-09 66.2 115 41.7
SHI07239 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-09 66.2 71 52.1
ECA234G2692 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.0e-09 65.5 100 42.0
Sopen02g010030 Solanum pennellii HOM05D000002 ORTHO05D000001 6.6e-09 64.3 110 37.3
Hma1.2p1_0018F.1_g012350 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.1e-08 63.5 84 39.3
THA.LOC104818098 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.1e-08 63.5 103 36.9
THA.LOC104825710 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 4.3e-08 61.6 79 40.5
THA.LOC109116072 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 4.3e-08 61.6 65 49.2
Migut.C00657 Erythranthe guttata HOM05D000002 ORTHO05D000001 5.6e-08 61.2 87 41.4
ECA240G1898 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.3e-08 60.8 105 40.0
SHI21224 Sapria himalayana HOM05D033424 ORTHO05D000001 7.3e-08 60.8 78 46.2
Atru.chr3.2937 Acer truncatum HOM05D000002 ORTHO05D000001 1.3e-07 60.1 66 48.5
HanXRQChr13g0407151 Helianthus annuus HOM05D000002 ORTHO05D000001 1.6e-07 59.7 101 37.6
THA.LOC109115986 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.6e-07 59.7 80 40.0
Nitab4.5_0000905g0060 Nicotiana tabacum HOM05D000002 ORTHO05D000001 2.1e-07 59.3 70 44.3
THA.LOC104798820 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.1e-07 59.3 70 44.3
THA.LOC109116754 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.1e-07 59.3 59 52.5
Hma1.2p1_1940F.1_g308370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.8e-07 58.9 81 42.0
Atru.chr13.1158 Acer truncatum HOM05D000002 ORTHO05D000001 4.8e-07 58.2 59 50.8
Migut.F01917 Erythranthe guttata HOM05D000002 ORTHO05D000001 6.2e-07 57.8 107 33.6
Nitab4.5_0001654g0030 Nicotiana tabacum HOM05D000002 ORTHO05D000001 6.2e-07 57.8 66 47.0
C09p04910 Brassica napus HOM05D000984 ORTHO05D021680 8.1e-07 57.4 59 47.5
BolC9t53419H Brassica oleracea HOM05D000984 ORTHO05D021680 8.1e-07 57.4 59 47.5
TWI63G1325 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 8.1e-07 57.4 84 36.9
Atru.chr3.2494 Acer truncatum HOM05D000002 ORTHO05D000001 1.4e-06 56.6 60 41.7
Atru.chr7.838 Acer truncatum HOM05D000002 ORTHO05D000001 1.4e-06 56.6 83 41.0
Sopen05g011750 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-06 56.6 105 34.3
THA.LOC104808376 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.4e-06 56.6 99 33.3
Psat7g134120 Pisum sativum HOM05D000002 ORTHO05D000001 1.8e-06 56.2 93 34.4
Sopen06g017500 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-06 56.2 105 33.3
Sopen12g023510 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-06 56.2 105 34.3
Psat2g152960 Pisum sativum HOM05D000002 ORTHO05D000001 2.4e-06 55.8 93 34.4
Psat6g102280 Pisum sativum HOM05D000002 ORTHO05D000001 2.4e-06 55.8 93 34.4
Sopen11g003490 Solanum pennellii HOM05D000002 ORTHO05D000001 2.4e-06 55.8 105 33.3
THA.LOC109116472 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.4e-06 55.8 60 46.7
Migut.K01257 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.1e-06 55.5 106 31.1
Peaxi162Scf00718g00053 Petunia axillaris HOM05D000002 ORTHO05D000001 3.1e-06 55.5 84 34.5
Rhsim02G0160900 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.9e-06 54.3 88 33.0
Sopen04g008990 Solanum pennellii HOM05D000002 ORTHO05D000001 6.9e-06 54.3 66 42.4
CAN.G134.31 Capsicum annuum HOM05D000085 ORTHO05D006184 9.0e-06 53.9 106 33.0
COL.COLO4_38540 Corchorus olitorius HOM05D026776 ORTHO05D000001 9.0e-06 53.9 84 35.7
Lj2g0024035 Lotus japonicus HOM05D000002 ORTHO05D000001 9.0e-06 53.9 105 30.5
Nn7g37542 Nelumbo nucifera HOM05D000002 ORTHO05D000001 9.0e-06 53.9 51 45.1
Sopen06g032630 Solanum pennellii HOM05D000002 ORTHO05D000001 9.0e-06 53.9 104 32.7
Sopen12g010660 Solanum pennellii HOM05D000002 ORTHO05D000001 9.0e-06 53.9 105 33.3


User provided reference genes

Program Settings