Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002976 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 9.4e-175 616.7 298 100.0
CSS0030801 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 6.0e-129 464.5 329 72.9
CSS0006141 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.8e-125 453.0 317 72.9
CSS0025076 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.4e-109 399.4 325 66.2
CSS0001225 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.1e-103 380.6 314 66.2
CSS0012123 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.5e-100 370.2 315 64.8
CSS0037680 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 5.6e-95 351.7 324 61.4
CSS0043008 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 3.8e-43 179.5 125 69.6
CSS0002107 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 8.0e-41 171.8 92 85.9
CSS0007350 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 9.2e-37 158.3 92 79.3
CSS0042777 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.6e-36 157.5 225 46.2
CSS0000410 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.9e-35 153.3 218 47.2
CSS0023479 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 3.8e-35 152.9 224 44.2
CSS0025010 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 3.8e-35 152.9 224 44.2
CSS0017223 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 4.3e-34 149.4 214 46.3
CSS0014469 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 3.6e-33 146.4 217 43.8
CSS0032441 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 8.9e-16 88.6 75 50.7
CSS0027329 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.2e-14 84.0 75 50.7
Rhsim11G0064300 Rhododendron simsii HOM05D000004 ORTHO05D000034 1.1e-10 71.6 182 31.9
CSS0011436 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 9.5e-10 68.6 201 29.4
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 1.6e-09 67.8 192 29.7
CSS0047664 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.3e-08 63.9 178 28.7
CSS0026637 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 8.9e-08 62.0 39 79.5
Rhsim13G0139200 Rhododendron simsii HOM05D002352 ORTHO05D000224 1.2e-07 61.6 157 28.0
CSS0015860 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.0e-07 60.8 174 28.2
CSS0033175 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.4e-07 60.1 178 27.5
CSS0000254 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.4e-07 59.7 174 28.2
CSS0030164 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 4.4e-07 59.7 41 73.2
CSS0034226 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.4e-07 59.7 174 28.2
Rhsim06G0131400 Rhododendron simsii HOM05D011308 ORTHO05D000224 7.6e-07 58.9 236 24.2
CSS0017003 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.9e-07 58.5 291 25.1
Hma1.2p1_0096F.1_g047910 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 1.3e-06 58.2 46 52.2
Hma1.2p1_1484F.1_g286305 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 1.3e-06 58.2 46 52.2
Hma1.2p1_1716F.1_g299145 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 1.3e-06 58.2 46 52.2
Hma1.2p1_1869F.1_g306055 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 1.3e-06 58.2 46 52.2
RhsimUnG0175100 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.3e-06 58.2 73 39.7
CSS0025827 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.7e-06 57.8 39 74.4
Rhsim08G0114800 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.7e-06 57.8 238 23.5
CSS0014554 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.2e-06 57.4 39 71.8
CSS0029449 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.9e-06 57.0 291 23.7
CSS0045951 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.8e-06 56.6 276 24.6
Hma1.2p1_0079F.1_g041840 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 3.8e-06 56.6 45 53.3
Rhsim06G0042800 Rhododendron simsii HOM05D000004 ORTHO05D000034 3.8e-06 56.6 73 39.7
Rhsim06G0119500 Rhododendron simsii HOM05D011308 ORTHO05D000224 6.4e-06 55.8 249 23.3


User provided reference genes

Program Settings