Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002961 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 5.4e-86 320.9 151 100.0
CSS0040909 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 9.9e-72 273.5 151 89.4
CSS0026472 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 1.2e-64 250.0 151 81.5
Dinv21635 Davidia involucrata HOM05D007031 ORTHO05D008815 2.9e-55 218.8 143 78.3
Duzib205G0920 Durio zibethinus HOM05D007031 ORTHO05D008815 5.5e-54 214.5 150 72.0
THA.LOC104815489 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 4.6e-53 211.5 152 70.4
MSTRG.13772 Avicennia marina HOM05D007031 ORTHO05D008815 3.0e-52 208.8 150 69.3
Carub.0007s2484 Capsella rubella HOM05D007031 ORTHO05D008815 6.7e-52 207.6 148 69.6
CiPaw.12G109600 Carya illinoinensis HOM05D007031 ORTHO05D008815 6.7e-52 207.6 155 67.7
Ciclev10022693m.g Citrus clementina HOM05D007031 ORTHO05D008815 1.1e-51 206.8 153 68.6
Actinidia14432 Actinidia chinensis HOM05D007031 ORTHO05D008815 1.5e-51 206.5 156 69.2
Gohir.D08G188900 Gossypium hirsutum HOM05D007031 ORTHO05D008815 1.9e-51 206.1 151 68.9
Gorai.004G199000 Gossypium raimondii HOM05D007031 ORTHO05D008815 1.9e-51 206.1 151 68.9
TAR636G3191 Trochodendron aralioides HOM05D007031 ORTHO05D008815 3.3e-51 205.3 150 70.0
Solyc08g007380.4 Solanum lycopersicum HOM05D007031 ORTHO05D008815 9.6e-51 203.8 155 67.7
Sopen08g003330 Solanum pennellii HOM05D007031 ORTHO05D008815 9.6e-51 203.8 155 67.7
Lj2A217G30 Lonicera japonica HOM05D007031 ORTHO05D008815 1.6e-50 203.0 144 70.8
PSO386G0128 Papaver somniferum HOM05D007031 ORTHO05D008815 1.6e-50 203.0 146 67.1
BcaC09g50373 Brassica carinata HOM05D007031 ORTHO05D008815 2.1e-50 202.6 152 66.4
Cfa012711 Carpinus fangiana HOM05D007031 ORTHO05D008815 2.1e-50 202.6 157 68.8
RcHm_v2.0_Chr7g0203161 Rosa chinensis HOM05D007031 ORTHO05D008815 3.7e-50 201.8 150 70.0
FAN08G1843 Fragaria x ananassa HOM05D007031 ORTHO05D008815 6.2e-50 201.1 150 68.7
FAN18G3883 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.1e-49 200.3 150 69.3
TWI60G0154 Tripterygium wilfordii HOM05D007031 ORTHO05D008815 1.1e-49 200.3 146 69.9
CAN.G1227.14 Capsicum annuum HOM05D007031 ORTHO05D008815 1.4e-49 199.9 146 67.8
Thhalv10026497m.g Eutrema salsugineum HOM05D007031 ORTHO05D008815 1.4e-49 199.9 151 65.6
Lj2g0002187 Lotus japonicus HOM05D007031 ORTHO05D008815 1.4e-49 199.9 153 69.3
BcaNung00171 Brassica carinata HOM05D007031 ORTHO05D008815 3.1e-49 198.7 152 66.4
FvH4_5g18810 Fragaria vesca HOM05D007031 ORTHO05D008815 3.1e-49 198.7 147 70.1
FAN13G0327 Fragaria x ananassa HOM05D007031 ORTHO05D008815 5.3e-49 198.0 150 68.7
Lalb_Chr09g0324411 Lupinus albus HOM05D007031 ORTHO05D008815 5.3e-49 198.0 153 68.6
Cc08_g12500 Coffea canephora HOM05D007031 ORTHO05D008815 6.9e-49 197.6 151 64.9
AT4G16566 Arabidopsis thaliana HOM05D007031 ORTHO05D008815 1.2e-48 196.8 145 66.2
TPR.G25905 Trifolium pratense HOM05D007031 ORTHO05D008815 1.2e-48 196.8 149 69.8
Gohir.A08G170700 Gossypium hirsutum HOM05D007031 ORTHO05D008815 1.5e-48 196.4 152 69.1
BolC1t02559H Brassica oleracea HOM05D007031 ORTHO05D008815 2.0e-48 196.1 151 65.6
Glyma.11G032300 Glycine max HOM05D007031 ORTHO05D008815 2.6e-48 195.7 153 68.6
Lsat_1_v5_gn_5_187960 Lactuca sativa HOM05D007031 ORTHO05D008815 2.6e-48 195.7 147 68.7
Aa31LG2G12690 Aethionema arabicum HOM05D007031 ORTHO05D008815 4.5e-48 194.9 150 62.7
AL7G38260 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 4.5e-48 194.9 145 65.5
BraA01t02001Z Brassica rapa HOM05D007031 ORTHO05D008815 4.5e-48 194.9 147 66.0
PSO724G0679 Papaver somniferum HOM05D007031 ORTHO05D008815 4.5e-48 194.9 141 66.0
DCAR_027778 Daucus carota HOM05D007031 ORTHO05D008815 5.8e-48 194.5 155 63.2
Eucgr.E00427 Eucalyptus grandis HOM05D007031 ORTHO05D008815 5.8e-48 194.5 145 67.6
Potri.003G076400 Populus trichocarpa HOM05D007031 ORTHO05D008815 5.8e-48 194.5 143 69.2
Phvul.002G062701 Phaseolus vulgaris HOM05D007031 ORTHO05D008815 7.6e-48 194.1 147 68.0
CARHR223050 Cardamine hirsuta HOM05D007031 ORTHO05D008815 1.0e-47 193.7 142 63.4
Aqoxy5G01014 Aquilegia oxysepala HOM05D007031 ORTHO05D008815 1.3e-47 193.4 146 67.8
Hma1.2p1_0316F.1_g123210 Hydrangea macrophylla HOM05D007031 ORTHO05D008815 2.2e-47 192.6 113 78.8
ECA232G3888 Erigeron canadensis HOM05D007031 ORTHO05D008815 3.8e-47 191.8 144 67.4
vmacro16391 Vaccinium macrocarpon HOM05D007031 ORTHO05D008815 3.8e-47 191.8 111 80.2
arahy.Tifrunner.gnm1.ann1.R85P7C Arachis hypogaea HOM05D007031 ORTHO05D008815 1.4e-46 189.9 146 65.8
arahy.Tifrunner.gnm1.ann1.WL6NYT Arachis hypogaea HOM05D007031 ORTHO05D008815 2.5e-46 189.1 146 65.1
Sed0003740 Sechium edule HOM05D007031 ORTHO05D008815 2.5e-46 189.1 145 66.9
Psat2g177560 Pisum sativum HOM05D007031 ORTHO05D008815 5.5e-46 188.0 156 62.8
Migut.E00966 Erythranthe guttata HOM05D007031 ORTHO05D008815 7.1e-46 187.6 142 64.8
Migut.E01683 Erythranthe guttata HOM05D007031 ORTHO05D008815 9.3e-46 187.2 142 64.8
Atru.chr9.1322 Acer truncatum HOM05D007031 ORTHO05D008815 1.2e-45 186.8 115 74.8
CANSAT21G0077 Cannabis sativa HOM05D007031 ORTHO05D008815 2.1e-45 186.0 147 63.9
CsaV3_5G004200 Cucumis sativus L. HOM05D007031 ORTHO05D008815 6.0e-45 184.5 145 65.5
HPP92_027426 Vanilla planifolia HOM05D007031 ORTHO05D008815 3.0e-44 182.2 149 61.7
AL7G38210 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 5.1e-44 181.4 113 73.5
MBI04_g09491_MAGBIO Magnolia biondii HOM05D007031 ORTHO05D008815 6.7e-44 181.0 184 52.7
HPP92_021039 Vanilla planifolia HOM05D007031 ORTHO05D008815 6.7e-44 181.0 149 61.1
CDE09G0628 Ceratophyllum demersum HOM05D005321 ORTHO05D006360 2.5e-43 179.1 139 63.3
QL12p012249 Quercus lobata HOM05D007031 ORTHO05D008815 5.7e-43 177.9 109 76.1
ClCG01G004020 Citrullus lanatus HOM05D007031 ORTHO05D008815 9.6e-43 177.2 163 56.4
BcaNung02861 Brassica carinata HOM05D007031 ORTHO05D008815 2.8e-42 175.6 148 60.1
Peaxi162Scf00102g01143 Petunia axillaris HOM05D007031 ORTHO05D008815 6.3e-42 174.5 111 73.0
Os04g0535400 Oryza sativa ssp. japonica HOM05D007031 ORTHO05D008815 1.1e-41 173.7 140 61.4
unitig_699.g19776 Utricularia gibba HOM05D007031 ORTHO05D008815 4.1e-41 171.8 111 71.2
SEGI_08804 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 5.3e-41 171.4 140 60.0
MELO3C005535.2 Cucumis melo HOM05D007031 ORTHO05D008815 2.0e-40 169.5 101 77.2
Hund14533 Selenicereus undatus HOM05D007031 ORTHO05D008815 6.5e-39 164.5 109 72.5
ATR0317G125 Amborella trichopoda HOM05D007031 ORTHO05D008815 1.4e-38 163.3 137 59.1
FAN14G5160 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.5e-38 162.5 139 56.8
CiPaw.11G153700 Carya illinoinensis HOM05D007031 ORTHO05D008815 2.1e-37 159.5 111 70.3
EL10Ac5g13074 Beta vulgaris HOM05D007031 ORTHO05D008815 3.6e-37 158.7 177 48.6
C01p26150 Brassica napus HOM05D007031 ORTHO05D008815 3.9e-36 155.2 126 61.9
MD04G1063700 Malus domestica HOM05D007031 ORTHO05D008815 6.7e-36 154.5 119 67.2
Nitab4.5_0000712g0190 Nicotiana tabacum HOM05D007031 ORTHO05D008815 8.7e-36 154.1 163 51.5
A01p20650 Brassica napus HOM05D007031 ORTHO05D008815 1.1e-35 153.7 126 61.9
VMungo1215G1202 Vigna mungo HOM05D007031 ORTHO05D008815 1.3e-34 150.2 117 65.8
Zm00001eb427450 Zea mays HOM05D007031 ORTHO05D008815 1.3e-34 150.2 101 64.4
Manes.02G039100 Manihot esculenta HOM05D007031 ORTHO05D008815 2.8e-34 149.1 115 67.0
BolC7t45328H Brassica oleracea HOM05D007031 ORTHO05D008815 1.1e-33 147.1 130 59.2
Sp7g15180 Schrenkiella parvula HOM05D007031 ORTHO05D008815 6.9e-33 144.4 152 51.3
Sabra03G0047000 Salix brachista HOM05D007031 ORTHO05D008815 2.6e-32 142.5 157 48.4
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 5.0e-31 138.3 111 61.3
THA.LOC104815507 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 2.5e-30 136.0 79 77.2
FAN04G1478 Fragaria x ananassa HOM05D007031 ORTHO05D008815 7.2e-30 134.4 82 76.8
AUR62042788 Chenopodium quinoa HOM05D007031 ORTHO05D008815 6.1e-29 131.3 111 55.9
Haze_07923 Corylus avellana HOM05D007031 ORTHO05D008815 7.9e-29 131.0 152 48.7
Nn6g33971 Nelumbo nucifera HOM05D007031 ORTHO05D008815 2.3e-28 129.4 112 58.9
BcaC06g33496 Brassica carinata HOM05D007031 ORTHO05D008815 8.8e-28 127.5 84 69.0
SMO274G0074 Selaginella moellendorffii HOM05D007031 ORTHO05D008815 7.4e-27 124.4 141 46.1
Prupe.5G068700 Prunus persica HOM05D007031 ORTHO05D008815 1.7e-26 123.2 153 48.4
AUR62007512 Chenopodium quinoa HOM05D007031 ORTHO05D008815 1.1e-25 120.6 83 65.1
SMO134G0120 Selaginella moellendorffii HOM05D000076 ORTHO05D001279 1.8e-25 119.8 109 51.4
Pp3c5_26880 Physcomitrium patens HOM05D007031 ORTHO05D008815 3.1e-25 119.0 146 42.5
Nitab4.5_0002225g0110 Nicotiana tabacum HOM05D007031 ORTHO05D008815 3.8e-23 112.1 138 51.4
FAN02G0786 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.1e-22 110.5 107 57.0
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 2.5e-22 109.4 116 52.6
Oeu062969.1 Olea europaea HOM05D007031 ORTHO05D008815 4.2e-22 108.6 142 45.1
GSVIVG01001319001 Vitis vinifera HOM05D007031 ORTHO05D008815 5.5e-22 108.2 89 67.4
Sc22g0000840 Simmondsia chinensis HOM05D007031 ORTHO05D008815 5.2e-20 101.7 89 60.7
SalBow6G3941 Salvia bowleyana HOM05D007031 ORTHO05D008815 2.6e-19 99.4 109 48.6
Pp3c6_3420 Physcomitrium patens HOM05D029721 ORTHO05D008815 5.3e-17 91.7 83 55.4
Cre03.g169200 Chlamydomonas reinhardtii HOM05D007031 ORTHO05D008815 5.9e-16 88.2 120 41.7
MCO15G691 Micromonas commoda HOM05D007031 ORTHO05D008815 5.9e-16 88.2 124 37.9
Medtr5g012525 Medicago truncatula HOM05D007031 ORTHO05D008815 1.3e-15 87.0 55 76.4
SEGI_18261 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 4.2e-14 82.0 92 50.0
Thecc.03G252200 Theobroma cacao HOM05D007031 ORTHO05D008815 1.2e-13 80.5 84 53.6
FAN05G5584 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.0e-07 60.8 62 53.2


User provided reference genes

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