Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.0e-97 360.1 191 100.0
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.0e-97 360.1 191 100.0
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.3e-94 349.0 191 97.4
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.5e-88 328.9 191 93.2
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 3.9e-81 305.1 180 92.2
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.0e-57 227.3 130 93.1
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.6e-34 150.2 111 71.2
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 1.8e-33 146.7 115 71.3
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 2.0e-32 143.3 110 71.8
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 7.4e-32 141.4 112 70.5
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 9.7e-32 141.0 112 72.3
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 4.1e-30 135.6 110 70.9
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 6.9e-30 134.8 102 70.6
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 2.9e-28 129.4 107 67.3
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 7.9e-26 121.3 110 66.4
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 1.0e-25 120.9 110 64.5
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 2.3e-25 119.8 111 61.3
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 8.8e-25 117.9 96 68.8
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 1.1e-24 117.5 110 61.8
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 2.0e-24 116.7 109 59.6
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 2.0e-24 116.7 95 68.4
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 2.6e-24 116.3 100 64.0
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 3.3e-24 115.9 111 58.6
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 7.4e-24 114.8 111 59.5
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 1.3e-23 114.0 95 66.3
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 3.7e-23 112.5 96 62.5
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 2.4e-22 109.8 137 53.3
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 3.1e-22 109.4 82 68.3
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 4.1e-22 109.0 111 55.9
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 4.1e-22 109.0 111 55.9
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 4.1e-22 109.0 111 55.9
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 4.1e-22 109.0 111 58.6
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 4.1e-22 109.0 91 68.1
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 7.0e-22 108.2 111 58.6
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 7.0e-22 108.2 111 56.8
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 9.1e-22 107.8 111 57.7
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 1.2e-21 107.5 94 64.9
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 1.6e-21 107.1 112 57.1
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 7.7e-21 104.8 97 56.7
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 1.3e-20 104.0 112 54.5
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 1.7e-20 103.6 86 64.0
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 2.9e-20 102.8 82 65.9
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 1.5e-19 100.5 101 56.4
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 4.2e-19 99.0 87 62.1
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 7.2e-19 98.2 95 58.9
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 1.6e-18 97.1 92 59.8
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 1.6e-18 97.1 91 60.4
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 2.1e-18 96.7 94 55.3
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 2.1e-18 96.7 93 57.0
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 2.1e-18 96.7 131 42.0
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 3.6e-18 95.9 89 61.8
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 6.1e-18 95.1 88 61.4
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 1.8e-17 93.6 109 49.5
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 3.0e-17 92.8 112 53.6
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 3.0e-17 92.8 87 62.1
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 8.8e-17 91.3 109 50.5
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 8.8e-17 91.3 91 58.2
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 1.2e-16 90.9 92 57.6
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 1.5e-16 90.5 88 58.0
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 1.5e-16 90.5 90 61.1
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 2.0e-16 90.1 79 69.6
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 2.6e-16 89.7 89 56.2
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 1.7e-15 87.0 90 56.7
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 2.2e-15 86.7 88 59.1
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 3.7e-15 85.9 94 52.1
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 3.7e-15 85.9 111 48.6
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 1.1e-14 84.3 79 63.3
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 1.8e-14 83.6 90 52.2
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 1.8e-14 83.6 86 54.7
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 1.8e-14 83.6 86 55.8
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 2.4e-14 83.2 75 65.3
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 3.1e-14 82.8 73 64.4
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 3.1e-14 82.8 88 58.0
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 4.1e-14 82.4 83 56.6
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 4.1e-14 82.4 91 53.8
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 4.1e-14 82.4 88 54.5
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 5.3e-14 82.0 111 45.9
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 5.3e-14 82.0 75 61.3
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 9.1e-14 81.3 90 56.7
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 9.1e-14 81.3 111 45.9
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 4.5e-13 79.0 88 52.3
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 4.5e-13 79.0 111 45.0
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 4.5e-13 79.0 84 54.8
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 7.7e-13 78.2 83 54.2
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 7.7e-13 78.2 90 50.0
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 1.0e-12 77.8 78 56.4
Pp3c6_21850 Physcomitrium patens HOM05D006591 ORTHO05D007861 1.0e-12 77.8 121 42.1
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 1.3e-12 77.4 111 45.0
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 1.3e-12 77.4 86 58.1
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 1.3e-12 77.4 89 48.3
CBR_g23768 Chara braunii HOM05D006591 ORTHO05D007861 1.7e-12 77.0 98 42.9
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 2.2e-12 76.6 95 46.3
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 2.2e-12 76.6 85 54.1
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 2.2e-12 76.6 79 57.0
Gohir.D10G139700 Gossypium hirsutum HOM05D006591 ORTHO05D007861 8.5e-12 74.7 60 68.3
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 1.9e-11 73.6 88 52.3
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 3.2e-11 72.8 85 52.9
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 4.2e-11 72.4 71 53.5
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 1.2e-10 70.9 83 55.4
Cre02.g117550 Chlamydomonas reinhardtii HOM05D006591 ORTHO05D007861 2.7e-10 69.7 86 41.9
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 3.6e-10 69.3 67 53.7
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 8.0e-10 68.2 111 47.7
Actinidia22381 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.0e-09 67.8 42 78.6
MBI18_g32376_MAGBIO Magnolia biondii HOM05D006591 ORTHO05D007861 4.0e-09 65.9 44 72.7
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 5.2e-09 65.5 64 57.8
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 6.8e-09 65.1 69 56.5
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 6.8e-09 65.1 69 56.5
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 6.8e-09 65.1 69 56.5
BolC4t27718H Brassica oleracea HOM05D006591 ORTHO05D007861 8.8e-09 64.7 119 43.7
EL10Ac6g14961 Beta vulgaris HOM05D027931 ORTHO05D007861 2.0e-08 63.5 131 36.6
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 2.0e-08 63.5 69 55.1
EL10Ac6g14960 Beta vulgaris HOM05D006591 ORTHO05D007861 3.4e-08 62.8 130 33.8
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 4.4e-08 62.4 85 50.6
CAN.G1340.10 Capsicum annuum HOM05D006591 ORTHO05D007861 2.8e-07 59.7 37 78.4
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 1.4e-06 57.4 83 43.4
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 3.1e-06 56.2 85 42.4
A07p05510 Brassica napus HOM05D006591 ORTHO05D007861 9.1e-06 54.7 51 56.9


User provided reference genes

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